RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Btbd35f26J3QNK2 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f24J3QNQ5 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f8J3QQ50 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f17L7MU81 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f18L7MU83 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ctnnd2O35927 1247 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 WapP01173 134 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 HpcaP84075 193 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f14Q1LZI5 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f27Q5FWA1 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rnf145Q5SWK7 663 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Mtnr1aQ61184 353 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Wee2Q66JT0 555 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Il17reQ8BH06 637 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Mboat7Q8CHK3 473 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 GMCL1P1Q99N64 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ssxb1Q9CPU1 170 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Dnajc12Q9R022 198 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Adamtsl3G3UXC7 1706 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Zscan4eA0A1B0GRE8 505 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Sh3pxd2bA2AAY5 908 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm5145F8VQ88 278 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 MttpO08601 894 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Dsg3O35902 993 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Itgb3O54890 787 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Cbx3P23198 183 aaKnown RBP11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gjb1P28230 283 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Psme3P61290 254 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Fscn2Q32M02 492 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 B3gntl1Q3U129 357 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gstt1Q64471 240 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Mapk4Q6P5G0 583 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Thoc5Q8BKT7 683 aaKnown RBP11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Arhgap28Q8BN58 729 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Vps50Q8CI71 964 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Slc5a9Q8VDT1 685 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Decr1Q9CQ62 335 aaKnown RBP11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 CacybpQ9CXW3 229 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Dnaja2Q9QYJ0 412 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 PiggD3Z3Y1 983 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ifit3bE9PV48 403 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Zc3h12bG3X9I7 835 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Dpy19l2P0CW70 773 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Zfy2P20662 777 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Psmb9P28076 219 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Aldh3a1P47739 453 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Bace1P56818 501 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm4981Q3ULJ8 291 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Stk40Q7TNL3 435 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pdzph1Q8BGR1 1238 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Nipa1Q8BHK1 323 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Fnbp1lQ8K012 605 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Arhgef3Q91X46 524 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Smad9Q9JIW5 430 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Iigp1Q9QZ85 413 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Map3k6Q9WTR2 1291 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Mindy4b-psA0A1W2P7H6 457 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm5751A2AHC8 147 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ssxb8B1AY40 170 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Klhl4B1AZR0 717 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 ClockO08785 855 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Kcnq1P97414 668 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Q3UJP5 209 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 MogQ61885 246 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pcdhga7Q6DD96 935 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rps27lQ6ZWY3 84 aaKnown RBP11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ubap2lQ80X50 1107 aaKnown RBP11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Sema3dQ8BH34 777 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Camkk2Q8C078 588 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Stx5Q8K1E0 355 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rnh1Q91VI7 456 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pcdhga4Q91XY4 930 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pdia5Q921X9 517 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Unc45aQ99KD5 944 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pole4Q9CQ36 118 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 1700064H15RikD3Z4D4 81 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Serpina3kP07759 418 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Icam1P13597 537 aaKnown RBP11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 RxrgP28705 463 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Defa8P50706 81 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 WhammQ571B6 793 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pcbp2Q61990 362 aaKnown RBP11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Lpcat4Q6NVG1 524 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Chst10Q6PGK7 356 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Golm1Q91XA2 393 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Trps1Q925H1 1281 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 MycsQ9Z304 431 aa11.54□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Phka1P18826 1241 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tfap2aP34056 437 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 ItgavP43406 1044 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Man1a1P45700 655 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ddr2Q62371 854 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Cyp3a16Q64481 504 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Zfp512bQ6PHP4 879 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tdrd1Q99MV1 1172 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Prpsap1Q9D0M1 356 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Bclaf3A2AG58 752 aaKnown RBP11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Fbrsl1E9Q9T0 1031 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Prom1O54990 867 aa11.53□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Nr3c1P06537 783 aa11.53□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms