RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Vmn2r46L7N282 809 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Ythdf1P59326 559 aaKnown RBP15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Gja3Q64448 417 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 VwdeQ6DFV8 926 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Tas2r102Q7M717 329 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Zfp446Q8C9M8 523 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 OscarQ8VBT3 265 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 TbccQ8VCN9 341 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Snrpb2Q9CQI7 225 aaKnown RBP15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Tnfrsf21Q9EPU5 655 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 A0A1Y7VIU7 259 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Vmn2r1O70410 912 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Mis18bp1Q80WQ8 998 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Ubash3bQ8BGG7 638 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Setdb2Q8C267 713 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Kat5Q8CHK4 513 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Ndufa5Q9CPP6 116 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Q9CPS8 106 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 4930513O06RikQ9D549 161 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 1700031M16RikA0A087WSH0 82 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Olfr220E9Q050 325 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Gm17175E9Q528 179 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Cyp2c68K7N6C2 491 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Nfatc2ipO09130 412 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Nek2O35942 443 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 AprtP08030 180 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Vav1P27870 845 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 PklrP53657 574 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Syn2Q64332 586 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Rxfp1Q6R6I7 758 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Lca5lQ8C0X0 741 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Lrrc42Q8R2U7 421 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Gtf2ird2Q99NI3 936 aa15.48■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Astn1Q61137 1302 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Angpt1O08538 498 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Hk1P17710 974 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 LvrnQ2KHK3 559 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Pih1d3Q3KNI6 218 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Plekhf1Q3TB82 279 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Tcf4Q60722 670 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Txndc8Q69AB2 127 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Olfr295Q7TS08 309 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Olfr169Q7TS53 313 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 SgtaQ8BJU0 315 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Fam126bQ8C729 530 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Rdh13Q8CEE7 334 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Slc35c2Q8VCX2 364 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Elp3Q9CZX0 547 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Klhl32A2AJX0 620 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Hsd17b7O88736 334 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Magea5O89009 320 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Magea8O89012 320 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Aldh3a1P47739 453 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Fam131bQ3TY60 332 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Magea3Q6T340 320 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Cspg5Q71M36 566 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Abi3Q8BYZ1 367 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 WwoxQ91WL8 414 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Efcab1Q9D3N2 212 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Ak1Q9R0Y5 194 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Mtf2Q02395 593 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Usp39Q3TIX9 564 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Atxn2lQ7TQH0 1049 aaKnown RBP15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Snapc2Q91XA5 359 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Sertad2Q9JJG5 309 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Khdrbs3Q9R226 346 aaKnown RBP15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Katna1Q9WV86 491 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Ccnb1ip1D3Z3K2 276 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Cdk14O35495 469 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 AvilO88398 819 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Il13ra2O88786 383 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Capza2P47754 286 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 NfycP70353 335 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Ugt1a2P70691 533 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 OsbpQ3B7Z2 805 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Kctd21Q3URF8 260 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Fam169aQ5XG69 665 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 PostnQ62009 838 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Ugt1a1Q63886 535 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Glra2Q7TNC8 452 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 RragdQ7TT45 449 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Dlgap2Q8BJ42 1059 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Pkn2Q8BWW9 983 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Pcyox1lQ8C7K6 495 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 BroxQ8K2Q7 411 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Mcfd2Q8K5B2 145 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Rpp40Q8R1F9 363 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Angel1Q8VCU0 667 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Klrb1fQ8VD98 217 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Caskin2Q8VHK1 1201 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Fubp1Q91WJ8 651 aaKnown RBP15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 HlcsQ920N2 722 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Fbxo32Q9CPU7 355 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Tex22Q9D9U4 189 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Ninj2Q9JL89 143 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Aqp5Q9WTY4 265 aa15.47■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Ccdc163A2AGD7 326 aa15.46■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Sgo2bJ3QMK1 1167 aa15.46■□□□□ 0.07
Col2a1-201ENSMUST00000023123 Slc16a8O35308 492 aa15.46■□□□□ 0.07
Col2a1-201ENSMUST00000023123 PdynO35417 248 aa15.46■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 44.1 ms