RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Gm379J3QQ19 296 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Hsd17b7O88736 334 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Gsta3P30115 221 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Slc6a13P31649 602 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Gabpb1Q00420 383 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Gba2Q69ZF3 918 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Bnip1Q6QD59 228 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Zbtb41Q811F1 908 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Ccdc40Q8BI79 1192 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Usp1Q8BJQ2 784 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Wbp11Q923D5 641 aaKnown RBP15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Cldn22Q9D7U6 220 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Akr1c12Q9JLI0 323 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 PignQ9R1S3 931 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 UprtB1AVZ0 310 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Tac1P41539 130 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 S100a5P63084 93 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Rnf157Q3TEL6 685 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Prpf38bQ80SY5 542 aaKnown RBP15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Klhl2Q8JZP3 593 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Nup85Q8R480 656 aaKnown RBP15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Tbc1d20Q9D9I4 402 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Tdp2Q9JJX7 370 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Mbtps1Q9WTZ2 1052 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Cdc42ep5Q9Z0X0 150 aa15.37■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Arhgef37A1IGU4 676 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Zmynd8A2A484 1235 aaKnown RBP15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Ccdc144bE9PVZ3 520 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Krt90E9Q1Z0 538 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Mc4rP56450 332 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Tab3Q571K4 716 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 CyldQ80TQ2 952 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Tbx10Q810F8 385 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Ephb1Q8CBF3 984 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 CherpQ8CGZ0 936 aaKnown RBP15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 DolkQ8R2Y3 534 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Slc22a19Q8VCA0 551 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Pcdha11Q91Y19 950 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 B4galt3Q91YY2 395 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 DarsQ922B2 501 aaKnown RBP15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 4933428M09RikQ9D3X3 192 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Q9D4A5 307 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Ern2Q9Z2E3 911 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Myo16Q5DU14 1919 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Dhx35A2ACQ1 703 aaKnown RBP15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Klhl41A2AUC9 606 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Vmn2r11E9Q4X4 861 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Gm3336J3QMQ6 198 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 EgfP01132 1217 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 PtprcP06800 1291 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Alas2P08680 587 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Serpinb2P12388 415 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Atxn10P28658 475 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Fbp2P70695 339 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Ano7Q14AT5 859 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 KizQ3UXL4 695 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Slc22a16Q497L8 649 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Fbxw11Q5SRY7 542 aaKnown RBP15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Slc7a4Q8BLQ7 635 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 BoraQ8BS90 525 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Pggt1bQ8BUY9 377 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 CopaQ8CIE6 1224 aaKnown RBP15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 GneQ91WG8 722 aaKnown RBP15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Pcdha6Q91Y14 946 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Ap2b1Q9DBG3 937 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Rbck1Q9WUB0 508 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Gm15155B1B034 138 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Ap2a2P17427 938 aaKnown RBP15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Trafd1Q3UDK1 580 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Cd300lfQ6SJQ7 337 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Usp6nlQ80XC3 819 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Nipal1Q8BMW7 416 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Zfp398Q8BV16 643 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Slco6c1Q8C0X7 706 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Sntg2Q925E0 539 aa15.36■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Mkrn2osD3Z393 217 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Vmn2r17E9PYF5 849 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Zfp882E9Q4R4 555 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 HcrtO55241 130 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Prl3b1P09586 222 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Slc2a7P0C6A1 513 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Tsta3P23591 321 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Eml1Q05BC3 814 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 RgnQ64374 299 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Gstt1Q64471 240 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Tmtc3Q8BRH0 920 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Zmiz2Q8CIE2 920 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Pcdhb13Q91Y06 796 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Ttll11A4Q9F4 727 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Fbxl18E9PYR1 771 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 DcxO88809 366 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Krt6aP50446 553 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Atp6v1b2P62814 511 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 UtyP79457 1212 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Proser1Q5PRE5 913 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Abcd2Q61285 741 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Gm5414Q6IFZ8 552 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Clec4b1Q7TS58 209 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 ClmnQ8C5W0 1052 aa15.35■□□□□ 0.05
Nkx3-1-201ENSMUST00000022646 Mbtps2Q8CHX6 515 aa15.35■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 111.2 ms