RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 UTP4Q06679 776 aaKnown RBP1.62□□□□□ -2.15
snR53snR53 PRE10P21242 288 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
snR53snR53 GLC3P32775 704 aa1.61□□□□□ -2.15
snR53snR53 GUP1P53154 560 aa1.61□□□□□ -2.15
snR53snR53 GPT2P36148 743 aa1.6□□□□□ -2.15
snR53snR53 TAT2P38967 592 aa1.6□□□□□ -2.15
snR53snR53 LEM3P42838 414 aa1.6□□□□□ -2.15
snR53snR53 PPT1P53043 513 aa1.6□□□□□ -2.15
snR53snR53 SPO71Q03868 1245 aa1.6□□□□□ -2.15
snR53snR53 TRE1Q08919 783 aa1.6□□□□□ -2.15
snR53snR53 YDJ1P25491 409 aaKnown RBP1.59□□□□□ -2.15
snR53snR53 PRO1P32264 428 aa1.59□□□□□ -2.15
snR53snR53 QDR2P40474 542 aa1.59□□□□□ -2.15
snR53snR53 INP51P40559 946 aaKnown RBP1.59□□□□□ -2.15
snR53snR53 YFL034WP43564 1073 aa1.59□□□□□ -2.15
snR53snR53 IOC3P43596 787 aa1.57□□□□□ -2.16
snR53snR53 CYT1P07143 309 aa1.56□□□□□ -2.16
snR53snR53 SCD5P34758 872 aa1.56□□□□□ -2.16
snR53snR53 YOR223WQ12015 292 aa1.56□□□□□ -2.16
snR53snR53 PDI1P17967 522 aaKnown RBP1.55□□□□□ -2.16
snR53snR53 SPT5P27692 1063 aaKnown RBP1.55□□□□□ -2.16
snR53snR53 PTC7P38797 343 aa1.55□□□□□ -2.16
snR53snR53 PEX7P39108 375 aa1.55□□□□□ -2.16
snR53snR53 NEO1P40527 1151 aa1.55□□□□□ -2.16
snR53snR53 AIM21P40563 679 aa1.55□□□□□ -2.16
snR53snR53 BIO5P53744 561 aaKnown RBP1.55□□□□□ -2.16
snR53snR53 SNO2P53823 222 aa1.55□□□□□ -2.16
snR53snR53 YAP7Q08182 245 aa1.55□□□□□ -2.16
snR53snR53 RPS4AP0CX35 261 aaKnown RBP1.54□□□□□ -2.16
snR53snR53 RPS4BP0CX36 261 aaKnown RBP1.54□□□□□ -2.16
snR53snR53 TFA2P36145 328 aa1.54□□□□□ -2.16
snR53snR53 FAR11P53917 953 aa1.54□□□□□ -2.16
snR53snR53 YMR074CQ04773 145 aa1.54□□□□□ -2.16
snR53snR53 YOR296WQ08748 1289 aa1.54□□□□□ -2.16
snR53snR53 SOG2Q08817 791 aa1.54□□□□□ -2.16
snR53snR53 CSE4P36012 229 aa1.53□□□□□ -2.16
snR53snR53 BSD2P38356 321 aa1.53□□□□□ -2.16
snR53snR53 GTS1P40956 396 aa1.53□□□□□ -2.16
snR53snR53 PPM2Q08282 695 aa1.53□□□□□ -2.16
snR53snR53 HCM1P25364 564 aa1.52□□□□□ -2.17
snR53snR53 CUE2P36075 443 aaKnown RBP1.52□□□□□ -2.17
snR53snR53 HXT5P38695 592 aa1.52□□□□□ -2.17
snR53snR53 CHS7P38843 316 aa1.52□□□□□ -2.17
snR53snR53 EAR1Q03212 550 aa1.52□□□□□ -2.17
snR53snR53 BOI1P38041 980 aaKnown RBP1.51□□□□□ -2.17
snR53snR53 YPP1P46951 817 aa1.51□□□□□ -2.17
snR53snR53 SPT20P50875 604 aa1.51□□□□□ -2.17
snR53snR53 DOT1Q04089 582 aaKnown RBP1.51□□□□□ -2.17
snR53snR53 AFT2Q08957 416 aa1.51□□□□□ -2.17
snR53snR53 YVC1Q12324 675 aa1.51□□□□□ -2.17
snR53snR53 GIP1P38229 639 aa1.5□□□□□ -2.17
snR53snR53 YIL165CP40446 119 aa1.5□□□□□ -2.17
snR53snR53 YNR021WP53723 404 aaKnown RBP1.5□□□□□ -2.17
snR53snR53 SSA2P10592 639 aaKnown RBP1.49□□□□□ -2.17
snR53snR53 ALD3P54114 506 aa1.49□□□□□ -2.17
snR53snR53 PMI40P29952 429 aaKnown RBP1.48□□□□□ -2.17
snR53snR53 UBA2P52488 636 aa1.48□□□□□ -2.17
snR53snR53 HAS1Q03532 505 aaKnown RBP1.48□□□□□ -2.17
snR53snR53 ICT1Q12385 394 aa1.48□□□□□ -2.17
snR53snR53 TSC13Q99190 310 aa1.48□□□□□ -2.17
snR53snR53 FOL2P51601 243 aaKnown RBP1.47□□□□□ -2.17
snR53snR53 NTO1Q12311 748 aa1.47□□□□□ -2.17
snR53snR53 YJR124CP47159 448 aa1.46□□□□□ -2.18
snR53snR53 URN1Q06525 465 aaKnown RBP1.46□□□□□ -2.18
snR53snR53 FUS1P11710 512 aa1.45□□□□□ -2.18
snR53snR53 DYS1P38791 387 aa1.45□□□□□ -2.18
snR53snR53 MSH4P40965 878 aaPredicted RBP1.45□□□□□ -2.18
snR53snR53 ALT1P52893 592 aa1.45□□□□□ -2.18
snR53snR53 SCS3P53012 380 aa1.45□□□□□ -2.18
snR53snR53 KIN4Q01919 800 aa1.45□□□□□ -2.18
snR53snR53 YDR132CQ03900 495 aa1.45□□□□□ -2.18
snR53snR53 YOR352WQ08816 343 aa1.45□□□□□ -2.18
snR53snR53 OAR1P35731 278 aa1.44□□□□□ -2.18
snR53snR53 ISW1P38144 1129 aa1.44□□□□□ -2.18
snR53snR53 MOH1P38191 138 aa1.44□□□□□ -2.18
snR53snR53 YBL036CP38197 257 aa1.44□□□□□ -2.18
snR53snR53 YER158CP40095 573 aa1.44□□□□□ -2.18
snR53snR53 PHO23P50947 330 aa1.44□□□□□ -2.18
snR53snR53 MCM6P53091 1017 aaKnown RBP1.44□□□□□ -2.18
snR53snR53 VMA3P25515 160 aa1.43□□□□□ -2.18
snR53snR53 AIM7Q12156 149 aa1.43□□□□□ -2.18
snR53snR53 YLL054CQ12244 843 aa1.43□□□□□ -2.18
snR53snR53 MDM10P18409 493 aa1.42□□□□□ -2.18
snR53snR53 TMT1P32643 299 aa1.42□□□□□ -2.18
snR53snR53 GCN5Q03330 439 aa1.42□□□□□ -2.18
snR53snR53 EMG1Q06287 252 aaKnown RBP1.42□□□□□ -2.18
snR53snR53 ENO2P00925 437 aaKnown RBP1.41□□□□□ -2.18
snR53snR53 NOP1P15646 327 aaKnown RBP1.41□□□□□ -2.18
snR53snR53 MNN10P50108 393 aaKnown RBP1.41□□□□□ -2.18
snR53snR53 TMA10Q06177 86 aa1.41□□□□□ -2.18
snR53snR53 UBP1P25037 809 aa1.4□□□□□ -2.19
snR53snR53 PEX2P32800 271 aa1.4□□□□□ -2.19
snR53snR53 LDH1P38139 375 aa1.4□□□□□ -2.19
snR53snR53 LAM1P38851 1228 aa1.4□□□□□ -2.19
snR53snR53 MEF2P39677 819 aa1.4□□□□□ -2.19
snR53snR53 FET4P40988 552 aa1.4□□□□□ -2.19
snR53snR53 RGT1P32862 1170 aa1.39□□□□□ -2.19
snR53snR53 SEC5P89102 971 aa1.39□□□□□ -2.19
snR53snR53 HOF1Q05080 669 aa1.39□□□□□ -2.19
snR53snR53 SGD1Q06132 899 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms