RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC40	YPR110C	COB	P00163	385 aa		4.6	□□□□□ -1.67
RPC40	YPR110C	CYC8	P14922	966 aa		4.6	□□□□□ -1.67
RPC40	YPR110C	NCL1	P38205	684 aa	Known RBP	4.6	□□□□□ -1.67
RPC40	YPR110C	YHL008C	P38750	627 aa		4.6	□□□□□ -1.67
RPC40	YPR110C	HEH2	Q03281	663 aa		4.6	□□□□□ -1.67
RPC40	YPR110C	DIT1	P21623	536 aa		4.59	□□□□□ -1.67
RPC40	YPR110C	PYC2	P32327	1180 aa	Known RBP	4.59	□□□□□ -1.67
RPC40	YPR110C	MDJ1	P35191	511 aa		4.59	□□□□□ -1.67
RPC40	YPR110C	RPS26A	P39938	119 aa	Known RBP	4.59	□□□□□ -1.67
RPC40	YPR110C	RPS26B	P39939	119 aa	Known RBP	4.59	□□□□□ -1.67
RPC40	YPR110C	SAP155	P43612	1002 aa		4.59	□□□□□ -1.67
RPC40	YPR110C	SPR28	Q04921	423 aa		4.59	□□□□□ -1.67
RPC40	YPR110C	ESF1	Q06344	628 aa	Known RBP	4.59	□□□□□ -1.67
RPC40	YPR110C	RAD2	P07276	1031 aa		4.58	□□□□□ -1.68
RPC40	YPR110C	KAR2	P16474	682 aa	Known RBP	4.58	□□□□□ -1.68
RPC40	YPR110C	PRP40	P33203	583 aa	Known RBP	4.58	□□□□□ -1.68
RPC40	YPR110C	DUR3	P33413	735 aa		4.58	□□□□□ -1.68
RPC40	YPR110C	MSC7	P38694	644 aa		4.58	□□□□□ -1.68
RPC40	YPR110C	NUT1	P53114	1132 aa		4.58	□□□□□ -1.68
RPC40	YPR110C	ORC1	P54784	914 aa	Predicted RBP	4.58	□□□□□ -1.68
RPC40	YPR110C	DAL4	Q04895	635 aa		4.58	□□□□□ -1.68
RPC40	YPR110C	RSC2	Q06488	889 aa		4.58	□□□□□ -1.68
RPC40	YPR110C	IDI1	P15496	288 aa		4.57	□□□□□ -1.68
RPC40	YPR110C	PRP5	P21372	849 aa	Predicted RBP	4.57	□□□□□ -1.68
RPC40	YPR110C	MNR2	P35724	969 aa		4.57	□□□□□ -1.68
RPC40	YPR110C	RIM11	P38615	370 aa		4.57	□□□□□ -1.68
RPC40	YPR110C	FAA3	P39002	694 aa		4.57	□□□□□ -1.68
RPC40	YPR110C	RVS167	P39743	482 aa	Known RBP	4.57	□□□□□ -1.68
RPC40	YPR110C	YPL109C	Q02981	657 aa		4.57	□□□□□ -1.68
RPC40	YPR110C	YMR265C	Q03508	461 aa	Known RBP	4.57	□□□□□ -1.68
RPC40	YPR110C	MCD1	Q12158	566 aa		4.57	□□□□□ -1.68
RPC40	YPR110C	YDR461C-A	Q2V2P7	80 aa		4.57	□□□□□ -1.68
RPC40	YPR110C	ECM2	P38241	364 aa	Known RBP	4.56	□□□□□ -1.68
RPC40	YPR110C	MRPS18	P42847	217 aa		4.56	□□□□□ -1.68
RPC40	YPR110C	CUZ1	P53899	274 aa		4.56	□□□□□ -1.68
RPC40	YPR110C	ADI1	Q03677	179 aa		4.56	□□□□□ -1.68
RPC40	YPR110C	JIP5	Q06214	492 aa	Predicted RBP	4.56	□□□□□ -1.68
RPC40	YPR110C	MAG2	Q06436	670 aa	Known RBP	4.56	□□□□□ -1.68
RPC40	YPR110C	PMT7	Q06644	662 aa		4.56	□□□□□ -1.68
RPC40	YPR110C	PRE9	P23638	258 aa	Known RBP	4.55	□□□□□ -1.68
RPC40	YPR110C	MCM5	P29496	775 aa	Known RBP	4.55	□□□□□ -1.68
RPC40	YPR110C	JJJ3	P47138	172 aa		4.55	□□□□□ -1.68
RPC40	YPR110C	PPT1	P53043	513 aa		4.55	□□□□□ -1.68
RPC40	YPR110C	VPS16	Q03308	798 aa		4.55	□□□□□ -1.68
RPC40	YPR110C	PIN2	Q12057	282 aa		4.55	□□□□□ -1.68
RPC40	YPR110C	GLO4	Q12320	285 aa		4.55	□□□□□ -1.68
RPC40	YPR110C	DPH6	Q12429	685 aa		4.55	□□□□□ -1.68
RPC40	YPR110C	HVG1	P0CE11	249 aa		4.54	□□□□□ -1.68
RPC40	YPR110C	FUS1	P11710	512 aa		4.54	□□□□□ -1.68
RPC40	YPR110C	CLN2	P20438	545 aa		4.54	□□□□□ -1.68
RPC40	YPR110C	FPS1	P23900	669 aa		4.54	□□□□□ -1.68
RPC40	YPR110C	PEP7	P32609	515 aa		4.54	□□□□□ -1.68
RPC40	YPR110C	AMN1	P38285	549 aa	Predicted RBP	4.54	□□□□□ -1.68
RPC40	YPR110C	PRK1	P40494	810 aa		4.54	□□□□□ -1.68
RPC40	YPR110C	BIO5	P53744	561 aa	Known RBP	4.54	□□□□□ -1.68
RPC40	YPR110C	KRE33	P53914	1056 aa	Known RBP	4.54	□□□□□ -1.68
RPC40	YPR110C	ALD3	P54114	506 aa		4.54	□□□□□ -1.68
RPC40	YPR110C	ULP1	Q02724	621 aa		4.54	□□□□□ -1.68
RPC40	YPR110C	TY1A-DR2	Q03964	440 aa	Known RBP	4.54	□□□□□ -1.68
RPC40	YPR110C	SYT1	Q06836	1226 aa		4.54	□□□□□ -1.68
RPC40	YPR110C	CMR1	Q12510	522 aa	Known RBP	4.54	□□□□□ -1.68
RPC40	YPR110C	OCA5	P38738	679 aa		4.53	□□□□□ -1.68
RPC40	YPR110C	INP51	P40559	946 aa	Known RBP	4.53	□□□□□ -1.68
RPC40	YPR110C	NNF1	P47149	201 aa		4.53	□□□□□ -1.68
RPC40	YPR110C	LYS5	P50113	272 aa		4.53	□□□□□ -1.68
RPC40	YPR110C	MON1	P53129	644 aa		4.53	□□□□□ -1.68
RPC40	YPR110C	YAF9	P53930	226 aa		4.53	□□□□□ -1.68
RPC40	YPR110C	SOG2	Q08817	791 aa		4.53	□□□□□ -1.68
RPC40	YPR110C	NPR1	P22211	790 aa		4.52	□□□□□ -1.69
RPC40	YPR110C	UGA4	P32837	571 aa		4.52	□□□□□ -1.69
RPC40	YPR110C	PET112	P33893	541 aa		4.52	□□□□□ -1.69
RPC40	YPR110C	PIC2	P40035	300 aa		4.52	□□□□□ -1.69
RPC40	YPR110C	ICP55	P40051	511 aa		4.52	□□□□□ -1.69
RPC40	YPR110C	ADE12	P80210	433 aa	Known RBP	4.52	□□□□□ -1.69
RPC40	YPR110C	NOG1	Q02892	647 aa	Known RBP	4.52	□□□□□ -1.69
RPC40	YPR110C	TFA2	P36145	328 aa		4.51	□□□□□ -1.69
RPC40	YPR110C	CEM1	P39525	442 aa		4.51	□□□□□ -1.69
RPC40	YPR110C	MAD1	P40957	749 aa		4.51	□□□□□ -1.69
RPC40	YPR110C	LSB3	P43603	459 aa	Known RBP	4.51	□□□□□ -1.69
RPC40	YPR110C	MRP10	O75012	95 aa		4.5	□□□□□ -1.69
RPC40	YPR110C	TAF13	P11747	167 aa		4.5	□□□□□ -1.69
RPC40	YPR110C	YFL066C	P43538	392 aa		4.5	□□□□□ -1.69
RPC40	YPR110C	GUP1	P53154	560 aa		4.5	□□□□□ -1.69
RPC40	YPR110C	NSG2	P53898	299 aa		4.5	□□□□□ -1.69
RPC40	YPR110C	PUS1	Q12211	544 aa	Known RBP	4.5	□□□□□ -1.69
RPC40	YPR110C	CDC34	P14682	295 aa		4.49	□□□□□ -1.69
RPC40	YPR110C	SEC23	P15303	768 aa	Known RBP	4.49	□□□□□ -1.69
RPC40	YPR110C	SHU2	P38957	223 aa		4.49	□□□□□ -1.69
RPC40	YPR110C	LEM3	P42838	414 aa		4.49	□□□□□ -1.69
RPC40	YPR110C	YJL181W	P46987	611 aa		4.49	□□□□□ -1.69
RPC40	YPR110C	YJR124C	P47159	448 aa		4.49	□□□□□ -1.69
RPC40	YPR110C	YNR065C	P53751	1116 aa		4.49	□□□□□ -1.69
RPC40	YPR110C	ALD6	P54115	500 aa	Known RBP	4.49	□□□□□ -1.69
RPC40	YPR110C	THI72	Q08579	599 aa		4.49	□□□□□ -1.69
RPC40	YPR110C	AIM44	Q99299	758 aa		4.49	□□□□□ -1.69
RPC40	YPR110C	HTS1	P07263	546 aa	Known RBP	4.48	□□□□□ -1.69
RPC40	YPR110C	DUT1	P33317	147 aa		4.48	□□□□□ -1.69
RPC40	YPR110C	PEX28	P38848	579 aa		4.48	□□□□□ -1.69
RPC40	YPR110C	GNP1	P48813	663 aa		4.48	□□□□□ -1.69
RPC40	YPR110C	YGL140C	P53120	1219 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 66.9 ms