RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	HEH2	Q03281	663 aa		4.73	□□□□□ -1.65
VAM10	YOR068C	OYE2	Q03558	400 aa	Known RBP	4.73	□□□□□ -1.65
VAM10	YOR068C	TY1A-DR2	Q03964	440 aa	Known RBP	4.73	□□□□□ -1.65
VAM10	YOR068C	SYT1	Q06836	1226 aa		4.73	□□□□□ -1.65
VAM10	YOR068C	FLP1	P03870	423 aa		4.72	□□□□□ -1.65
VAM10	YOR068C	MCM2	P29469	868 aa		4.72	□□□□□ -1.65
VAM10	YOR068C	DUR3	P33413	735 aa		4.72	□□□□□ -1.65
VAM10	YOR068C	CEM1	P39525	442 aa		4.72	□□□□□ -1.65
VAM10	YOR068C	PRK1	P40494	810 aa		4.72	□□□□□ -1.65
VAM10	YOR068C	LYS5	P50113	272 aa		4.72	□□□□□ -1.65
VAM10	YOR068C	IOC4	Q04213	475 aa		4.72	□□□□□ -1.65
VAM10	YOR068C	MRP10	O75012	95 aa		4.71	□□□□□ -1.66
VAM10	YOR068C	SPR28	Q04921	423 aa		4.71	□□□□□ -1.66
VAM10	YOR068C	FAA3	P39002	694 aa		4.7	□□□□□ -1.66
VAM10	YOR068C	ALD3	P54114	506 aa		4.7	□□□□□ -1.66
VAM10	YOR068C	MSH6	Q03834	1242 aa		4.7	□□□□□ -1.66
VAM10	YOR068C	RSC2	Q06488	889 aa		4.7	□□□□□ -1.66
VAM10	YOR068C	HXK1	P04806	485 aa	Known RBP	4.69	□□□□□ -1.66
VAM10	YOR068C	FUS1	P11710	512 aa		4.69	□□□□□ -1.66
VAM10	YOR068C	PRP40	P33203	583 aa	Known RBP	4.69	□□□□□ -1.66
VAM10	YOR068C	TFA2	P36145	328 aa		4.69	□□□□□ -1.66
VAM10	YOR068C	YJL181W	P46987	611 aa		4.69	□□□□□ -1.66
VAM10	YOR068C	DAL4	Q04895	635 aa		4.69	□□□□□ -1.66
VAM10	YOR068C	YCS4	Q06156	1176 aa		4.69	□□□□□ -1.66
VAM10	YOR068C	OXR1	Q08952	273 aa		4.69	□□□□□ -1.66
VAM10	YOR068C	UGA4	P32837	571 aa		4.68	□□□□□ -1.66
VAM10	YOR068C	RPS26A	P39938	119 aa	Known RBP	4.68	□□□□□ -1.66
VAM10	YOR068C	RPS26B	P39939	119 aa	Known RBP	4.68	□□□□□ -1.66
VAM10	YOR068C	JJJ3	P47138	172 aa		4.68	□□□□□ -1.66
VAM10	YOR068C	NUT1	P53114	1132 aa		4.68	□□□□□ -1.66
VAM10	YOR068C	MON1	P53129	644 aa		4.68	□□□□□ -1.66
VAM10	YOR068C	YGR122W	P53272	402 aa		4.68	□□□□□ -1.66
VAM10	YOR068C	CYC8	P14922	966 aa		4.67	□□□□□ -1.66
VAM10	YOR068C	ECM2	P38241	364 aa	Known RBP	4.67	□□□□□ -1.66
VAM10	YOR068C	RIM11	P38615	370 aa		4.67	□□□□□ -1.66
VAM10	YOR068C	INP51	P40559	946 aa	Known RBP	4.67	□□□□□ -1.66
VAM10	YOR068C	GLO4	Q12320	285 aa		4.67	□□□□□ -1.66
VAM10	YOR068C	CMR1	Q12510	522 aa	Known RBP	4.67	□□□□□ -1.66
VAM10	YOR068C	GPM1	P00950	247 aa	Known RBP	4.66	□□□□□ -1.66
VAM10	YOR068C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
VAM10	YOR068C	MCM5	P29496	775 aa	Known RBP	4.66	□□□□□ -1.66
VAM10	YOR068C	AMN1	P38285	549 aa	Predicted RBP	4.66	□□□□□ -1.66
VAM10	YOR068C	SAP155	P43612	1002 aa		4.66	□□□□□ -1.66
VAM10	YOR068C	BIO5	P53744	561 aa	Known RBP	4.66	□□□□□ -1.66
VAM10	YOR068C	HPF1	Q05164	967 aa		4.66	□□□□□ -1.66
VAM10	YOR068C	RAD2	P07276	1031 aa		4.65	□□□□□ -1.67
VAM10	YOR068C	HVG1	P0CE11	249 aa		4.65	□□□□□ -1.67
VAM10	YOR068C	PDC5	P16467	563 aa	Known RBP	4.65	□□□□□ -1.67
VAM10	YOR068C	NPR1	P22211	790 aa		4.65	□□□□□ -1.67
VAM10	YOR068C	ULP1	Q02724	621 aa		4.65	□□□□□ -1.67
VAM10	YOR068C	YPL109C	Q02981	657 aa		4.65	□□□□□ -1.67
VAM10	YOR068C	SVF1	Q05515	481 aa		4.65	□□□□□ -1.67
VAM10	YOR068C	PRP5	P21372	849 aa	Predicted RBP	4.64	□□□□□ -1.67
VAM10	YOR068C	YJR124C	P47159	448 aa		4.64	□□□□□ -1.67
VAM10	YOR068C	YAF9	P53930	226 aa		4.64	□□□□□ -1.67
VAM10	YOR068C	ESF1	Q06344	628 aa	Known RBP	4.64	□□□□□ -1.67
VAM10	YOR068C	PMT7	Q06644	662 aa		4.64	□□□□□ -1.67
VAM10	YOR068C	SOG2	Q08817	791 aa		4.64	□□□□□ -1.67
VAM10	YOR068C	KAR2	P16474	682 aa	Known RBP	4.63	□□□□□ -1.67
VAM10	YOR068C	KNS1	P32350	737 aa	Predicted RBP	4.63	□□□□□ -1.67
VAM10	YOR068C	RVS167	P39743	482 aa	Known RBP	4.63	□□□□□ -1.67
VAM10	YOR068C	LSB6	P42951	607 aa		4.63	□□□□□ -1.67
VAM10	YOR068C	YGR035C	P53222	116 aa		4.63	□□□□□ -1.67
VAM10	YOR068C	RMD1	Q03441	430 aa		4.63	□□□□□ -1.67
VAM10	YOR068C	DPH6	Q12429	685 aa		4.63	□□□□□ -1.67
VAM10	YOR068C	NAR1	P23503	491 aa	Known RBP	4.62	□□□□□ -1.67
VAM10	YOR068C	PRE9	P23638	258 aa	Known RBP	4.62	□□□□□ -1.67
VAM10	YOR068C	PEP7	P32609	515 aa		4.62	□□□□□ -1.67
VAM10	YOR068C	PIC2	P40035	300 aa		4.62	□□□□□ -1.67
VAM10	YOR068C	YNR065C	P53751	1116 aa		4.62	□□□□□ -1.67
VAM10	YOR068C	GIS4	Q04233	774 aa		4.62	□□□□□ -1.67
VAM10	YOR068C	JIP5	Q06214	492 aa	Predicted RBP	4.62	□□□□□ -1.67
VAM10	YOR068C	FET4	P40988	552 aa		4.61	□□□□□ -1.67
VAM10	YOR068C	SOK2	P53438	785 aa	Predicted RBP	4.61	□□□□□ -1.67
VAM10	YOR068C	ADI1	Q03677	179 aa		4.61	□□□□□ -1.67
VAM10	YOR068C	MCD1	Q12158	566 aa		4.61	□□□□□ -1.67
VAM10	YOR068C	PGM2	P37012	569 aa	Known RBP	4.6	□□□□□ -1.67
VAM10	YOR068C	MRPS18	P42847	217 aa		4.6	□□□□□ -1.67
VAM10	YOR068C	GUP1	P53154	560 aa		4.6	□□□□□ -1.67
VAM10	YOR068C	ORC1	P54784	914 aa	Predicted RBP	4.6	□□□□□ -1.67
VAM10	YOR068C	HAS1	Q03532	505 aa	Known RBP	4.6	□□□□□ -1.67
VAM10	YOR068C	ALG14	P38242	237 aa		4.59	□□□□□ -1.67
VAM10	YOR068C	NEO1	P40527	1151 aa		4.59	□□□□□ -1.67
VAM10	YOR068C	TED1	P40533	473 aa		4.59	□□□□□ -1.67
VAM10	YOR068C	RSM26	P47141	266 aa		4.59	□□□□□ -1.67
VAM10	YOR068C	NOG1	Q02892	647 aa	Known RBP	4.59	□□□□□ -1.67
VAM10	YOR068C	VPS16	Q03308	798 aa		4.59	□□□□□ -1.67
VAM10	YOR068C	MAG2	Q06436	670 aa	Known RBP	4.59	□□□□□ -1.67
VAM10	YOR068C	TOP1	P04786	769 aa		4.58	□□□□□ -1.68
VAM10	YOR068C	HTS1	P07263	546 aa	Known RBP	4.58	□□□□□ -1.68
VAM10	YOR068C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.58	□□□□□ -1.68
VAM10	YOR068C	TY1A-DR6	P0CX70	440 aa		4.58	□□□□□ -1.68
VAM10	YOR068C	TY1A-ER1	P0CX71	440 aa		4.58	□□□□□ -1.68
VAM10	YOR068C	TY1A-LR2	P0CX72	440 aa		4.58	□□□□□ -1.68
VAM10	YOR068C	TY1A-PL	P0CX73	440 aa		4.58	□□□□□ -1.68
VAM10	YOR068C	TY1A-JR1	P0CX74	440 aa		4.58	□□□□□ -1.68
VAM10	YOR068C	TY1A-LR3	P0CX75	440 aa		4.58	□□□□□ -1.68
VAM10	YOR068C	TY1A-ML2	P0CX76	440 aa		4.58	□□□□□ -1.68
VAM10	YOR068C	PET112	P33893	541 aa		4.58	□□□□□ -1.68
VAM10	YOR068C	SQT1	P35184	431 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms