RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRI2	YOL117W	SOG2	Q08817	791 aa		4.65	□□□□□ -1.67
RRI2	YOL117W	MDJ1	P35191	511 aa		4.64	□□□□□ -1.67
RRI2	YOL117W	SBE2	P42223	864 aa	Known RBP	4.64	□□□□□ -1.67
RRI2	YOL117W	MSH6	Q03834	1242 aa		4.64	□□□□□ -1.67
RRI2	YOL117W	GLO4	Q12320	285 aa		4.64	□□□□□ -1.67
RRI2	YOL117W	HEM3	P28789	327 aa		4.64	□□□□□ -1.67
RRI2	YOL117W	PGM2	P37012	569 aa	Known RBP	4.64	□□□□□ -1.67
RRI2	YOL117W	RIM11	P38615	370 aa		4.64	□□□□□ -1.67
RRI2	YOL117W	SAP155	P43612	1002 aa		4.64	□□□□□ -1.67
RRI2	YOL117W	YJL181W	P46987	611 aa		4.64	□□□□□ -1.67
RRI2	YOL117W	PRP5	P21372	849 aa	Predicted RBP	4.63	□□□□□ -1.67
RRI2	YOL117W	RRP15	Q06511	250 aa	Predicted RBP	4.63	□□□□□ -1.67
RRI2	YOL117W	THI72	Q08579	599 aa		4.63	□□□□□ -1.67
RRI2	YOL117W	DAK2	P43550	591 aa		4.62	□□□□□ -1.67
RRI2	YOL117W	SAM37	P50110	327 aa		4.62	□□□□□ -1.67
RRI2	YOL117W	YNR065C	P53751	1116 aa		4.62	□□□□□ -1.67
RRI2	YOL117W	SLP1	Q12232	587 aa		4.62	□□□□□ -1.67
RRI2	YOL117W	GUP1	P53154	560 aa		4.62	□□□□□ -1.67
RRI2	YOL117W	TOS4	Q06266	489 aa		4.62	□□□□□ -1.67
RRI2	YOL117W	INP54	Q08227	384 aa	Known RBP	4.62	□□□□□ -1.67
RRI2	YOL117W	CMR1	Q12510	522 aa	Known RBP	4.62	□□□□□ -1.67
RRI2	YOL117W	NHA1	Q99271	985 aa		4.62	□□□□□ -1.67
RRI2	YOL117W	ATE1	P16639	503 aa		4.61	□□□□□ -1.67
RRI2	YOL117W	VPS35	P34110	944 aa		4.61	□□□□□ -1.67
RRI2	YOL117W	MET1	P36150	593 aa		4.61	□□□□□ -1.67
RRI2	YOL117W	ALG14	P38242	237 aa		4.61	□□□□□ -1.67
RRI2	YOL117W	MCX1	P38323	520 aa	Predicted RBP	4.61	□□□□□ -1.67
RRI2	YOL117W	YJR124C	P47159	448 aa		4.61	□□□□□ -1.67
RRI2	YOL117W	NUT1	P53114	1132 aa		4.61	□□□□□ -1.67
RRI2	YOL117W	NOC3	Q07896	663 aa	Predicted RBP	4.61	□□□□□ -1.67
RRI2	YOL117W	TY4B-P	A0A0B7P3V8	1104 aa		4.6	□□□□□ -1.67
RRI2	YOL117W	NPR1	P22211	790 aa		4.6	□□□□□ -1.67
RRI2	YOL117W	GIP2	P40036	548 aa		4.6	□□□□□ -1.67
RRI2	YOL117W	ICP55	P40051	511 aa		4.6	□□□□□ -1.67
RRI2	YOL117W	SOK2	P53438	785 aa	Predicted RBP	4.6	□□□□□ -1.67
RRI2	YOL117W	TDA6	Q06466	467 aa		4.6	□□□□□ -1.67
RRI2	YOL117W	TY4A-H	Q6Q5P6	413 aa		4.6	□□□□□ -1.67
RRI2	YOL117W	YHL008C	P38750	627 aa		4.6	□□□□□ -1.67
RRI2	YOL117W	BOI2	P39969	1040 aa		4.6	□□□□□ -1.67
RRI2	YOL117W	NSG2	P53898	299 aa		4.6	□□□□□ -1.67
RRI2	YOL117W	GCD6	P32501	712 aa	Known RBP	4.59	□□□□□ -1.67
RRI2	YOL117W	LEM3	P42838	414 aa		4.59	□□□□□ -1.67
RRI2	YOL117W	THI12	P42883	340 aa		4.59	□□□□□ -1.67
RRI2	YOL117W	THI5	P43534	340 aa		4.59	□□□□□ -1.67
RRI2	YOL117W	THI11	P47183	340 aa		4.59	□□□□□ -1.67
RRI2	YOL117W	YCS4	Q06156	1176 aa		4.59	□□□□□ -1.67
RRI2	YOL117W	THI13	Q07748	340 aa		4.59	□□□□□ -1.67
RRI2	YOL117W	CIC1	P38779	376 aa	Known RBP	4.58	□□□□□ -1.68
RRI2	YOL117W	LSB6	P42951	607 aa		4.58	□□□□□ -1.68
RRI2	YOL117W	YNR014W	P53719	212 aa		4.58	□□□□□ -1.68
RRI2	YOL117W	HAS1	Q03532	505 aa	Known RBP	4.58	□□□□□ -1.68
RRI2	YOL117W	PHM7	Q12252	991 aa		4.58	□□□□□ -1.68
RRI2	YOL117W	YCK2	P23292	546 aa	Known RBP	4.58	□□□□□ -1.68
RRI2	YOL117W	TED1	P40533	473 aa		4.58	□□□□□ -1.68
RRI2	YOL117W	BUD9	P53226	547 aa		4.58	□□□□□ -1.68
RRI2	YOL117W	PAN5	P38787	379 aa		4.57	□□□□□ -1.68
RRI2	YOL117W	SKN7	P38889	622 aa		4.57	□□□□□ -1.68
RRI2	YOL117W	RVS167	P39743	482 aa	Known RBP	4.57	□□□□□ -1.68
RRI2	YOL117W	POL5	P39985	1022 aa	Known RBP	4.57	□□□□□ -1.68
RRI2	YOL117W	POL32	P47110	350 aa		4.57	□□□□□ -1.68
RRI2	YOL117W	YJR107W	P47145	328 aa		4.57	□□□□□ -1.68
RRI2	YOL117W	YAF9	P53930	226 aa		4.56	□□□□□ -1.68
RRI2	YOL117W	HXK1	P04806	485 aa	Known RBP	4.56	□□□□□ -1.68
RRI2	YOL117W	RPT1	P33299	467 aa	Known RBP	4.56	□□□□□ -1.68
RRI2	YOL117W	ECM2	P38241	364 aa	Known RBP	4.56	□□□□□ -1.68
RRI2	YOL117W	PMT7	Q06644	662 aa		4.56	□□□□□ -1.68
RRI2	YOL117W	YDR215C	Q12240	137 aa		4.56	□□□□□ -1.68
RRI2	YOL117W	HTS1	P07263	546 aa	Known RBP	4.55	□□□□□ -1.68
RRI2	YOL117W	PRP40	P33203	583 aa	Known RBP	4.55	□□□□□ -1.68
RRI2	YOL117W	RRM3	P38766	723 aa		4.55	□□□□□ -1.68
RRI2	YOL117W	FET4	P40988	552 aa		4.55	□□□□□ -1.68
RRI2	YOL117W	MON1	P53129	644 aa		4.55	□□□□□ -1.68
RRI2	YOL117W	UGA4	P32837	571 aa		4.54	□□□□□ -1.68
RRI2	YOL117W	SLN1	P39928	1220 aa	Predicted RBP	4.54	□□□□□ -1.68
RRI2	YOL117W	NOG1	Q02892	647 aa	Known RBP	4.54	□□□□□ -1.68
RRI2	YOL117W	YMR187C	Q03236	431 aa		4.54	□□□□□ -1.68
RRI2	YOL117W	SPO71	Q03868	1245 aa		4.54	□□□□□ -1.68
RRI2	YOL117W	FAA3	P39002	694 aa		4.54	□□□□□ -1.68
RRI2	YOL117W	DAL4	Q04895	635 aa		4.54	□□□□□ -1.68
RRI2	YOL117W	GAS5	Q08193	484 aa		4.54	□□□□□ -1.68
RRI2	YOL117W	YIG1	Q08956	461 aa		4.54	□□□□□ -1.68
RRI2	YOL117W	TY1A-NL1	Q12391	440 aa	Known RBP	4.54	□□□□□ -1.68
RRI2	YOL117W	AI3	P03877	415 aa		4.53	□□□□□ -1.68
RRI2	YOL117W	MCM5	P29496	775 aa	Known RBP	4.53	□□□□□ -1.68
RRI2	YOL117W	SFA1	P32771	386 aa		4.53	□□□□□ -1.68
RRI2	YOL117W	NEO1	P40527	1151 aa		4.53	□□□□□ -1.68
RRI2	YOL117W	DSE4	P53753	1117 aa		4.53	□□□□□ -1.68
RRI2	YOL117W	ULP1	Q02724	621 aa		4.53	□□□□□ -1.68
RRI2	YOL117W	YPR053C	Q6Q5F3	151 aa		4.53	□□□□□ -1.68
RRI2	YOL117W	SAC7	P17121	654 aa		4.52	□□□□□ -1.69
RRI2	YOL117W	ASF1	P32447	279 aa		4.52	□□□□□ -1.69
RRI2	YOL117W	PRY1	P47032	299 aa		4.52	□□□□□ -1.69
RRI2	YOL117W	YGR122W	P53272	402 aa		4.52	□□□□□ -1.69
RRI2	YOL117W	YPL109C	Q02981	657 aa		4.52	□□□□□ -1.69
RRI2	YOL117W	OXR1	Q08952	273 aa		4.52	□□□□□ -1.69
RRI2	YOL117W	SEC8	P32855	1065 aa		4.52	□□□□□ -1.69
RRI2	YOL117W	EXO5	P38289	585 aa		4.52	□□□□□ -1.69
RRI2	YOL117W	MGE1	P38523	228 aa		4.52	□□□□□ -1.69
RRI2	YOL117W	FYV10	P40492	516 aa		4.52	□□□□□ -1.69
RRI2	YOL117W	ELG1	Q12050	791 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 87 ms