RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	YBR287W	P38355	427 aa		8.18	□□□□□ -1.1
RSA3	YLR221C	FIR1	P40020	876 aa		8.18	□□□□□ -1.1
RSA3	YLR221C	QDR2	P40474	542 aa		8.17	□□□□□ -1.1
RSA3	YLR221C	SAM37	P50110	327 aa		8.17	□□□□□ -1.1
RSA3	YLR221C	MCA1	Q08601	432 aa		8.17	□□□□□ -1.1
RSA3	YLR221C	TAT1	P38085	619 aa		8.16	□□□□□ -1.1
RSA3	YLR221C	PRY1	P47032	299 aa		8.16	□□□□□ -1.1
RSA3	YLR221C	RPC31	P17890	251 aa		8.15	□□□□□ -1.1
RSA3	YLR221C	RPT1	P33299	467 aa	Known RBP	8.15	□□□□□ -1.1
RSA3	YLR221C	VPS35	P34110	944 aa		8.15	□□□□□ -1.1
RSA3	YLR221C	PGM2	P37012	569 aa	Known RBP	8.15	□□□□□ -1.1
RSA3	YLR221C	ALG14	P38242	237 aa		8.15	□□□□□ -1.1
RSA3	YLR221C	RAD55	P38953	406 aa		8.15	□□□□□ -1.1
RSA3	YLR221C	YNR040W	P53736	256 aa		8.15	□□□□□ -1.1
RSA3	YLR221C	GLT1	Q12680	2145 aa	Known RBP	8.14	□□□□□ -1.11
RSA3	YLR221C	APM2	P38700	605 aa		8.14	□□□□□ -1.11
RSA3	YLR221C	CIC1	P38779	376 aa	Known RBP	8.14	□□□□□ -1.11
RSA3	YLR221C	NTA1	P40354	457 aa		8.14	□□□□□ -1.11
RSA3	YLR221C	RSC4	Q02206	625 aa		8.14	□□□□□ -1.11
RSA3	YLR221C	NHA1	Q99271	985 aa		8.14	□□□□□ -1.11
RSA3	YLR221C	AMN1	P38285	549 aa	Predicted RBP	8.13	□□□□□ -1.11
RSA3	YLR221C	DAK2	P43550	591 aa		8.13	□□□□□ -1.11
RSA3	YLR221C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	8.13	□□□□□ -1.11	not detected
RSA3	YLR221C	OXR1	Q08952	273 aa		8.13	□□□□□ -1.11
RSA3	YLR221C	MSN1	P22148	382 aa		8.12	□□□□□ -1.11
RSA3	YLR221C	BSC2	Q05611	235 aa		8.12	□□□□□ -1.11
RSA3	YLR221C	NOC3	Q07896	663 aa	Predicted RBP	8.12	□□□□□ -1.11
RSA3	YLR221C	IRS4	P36115	615 aa	Known RBP	8.11	□□□□□ -1.11
RSA3	YLR221C	ISW1	P38144	1129 aa		8.11	□□□□□ -1.11
RSA3	YLR221C	LSB6	P42951	607 aa		8.11	□□□□□ -1.11
RSA3	YLR221C	RMD1	Q03441	430 aa		8.11	□□□□□ -1.11
RSA3	YLR221C	NAR1	P23503	491 aa	Known RBP	8.1	□□□□□ -1.11
RSA3	YLR221C	GIP1	P38229	639 aa		8.1	□□□□□ -1.11
RSA3	YLR221C	RGD2	P43556	714 aa		8.1	□□□□□ -1.11
RSA3	YLR221C	ORC1	P54784	914 aa	Predicted RBP	8.1	□□□□□ -1.11
RSA3	YLR221C	YOR296W	Q08748	1289 aa		8.1	□□□□□ -1.11
RSA3	YLR221C	PSY2	P40164	858 aa		8.09	□□□□□ -1.11
RSA3	YLR221C	FYV10	P40492	516 aa		8.09	□□□□□ -1.11
RSA3	YLR221C	GIS4	Q04233	774 aa		8.09	□□□□□ -1.11
RSA3	YLR221C	TIF6	Q12522	245 aa	Known RBP	8.08	□□□□□ -1.12
RSA3	YLR221C	JIP5	Q06214	492 aa	Predicted RBP	8.07	□□□□□ -1.12
RSA3	YLR221C	IDI1	P15496	288 aa		8.06	□□□□□ -1.12
RSA3	YLR221C	MCM2	P29469	868 aa		8.06	□□□□□ -1.12
RSA3	YLR221C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	8.06	□□□□□ -1.12	not detected
RSA3	YLR221C	BSD2	P38356	321 aa		8.06	□□□□□ -1.12
RSA3	YLR221C	ITC1	P53125	1264 aa		8.06	□□□□□ -1.12
RSA3	YLR221C	BUD9	P53226	547 aa		8.06	□□□□□ -1.12
RSA3	YLR221C	YGR122W	P53272	402 aa		8.06	□□□□□ -1.12
RSA3	YLR221C	MRP10	O75012	95 aa		8.05	□□□□□ -1.12
RSA3	YLR221C	ESF1	Q06344	628 aa	Known RBP	8.05	□□□□□ -1.12
RSA3	YLR221C	YHL008C	P38750	627 aa		8.04	□□□□□ -1.12
RSA3	YLR221C	YPL034W	Q03083	165 aa		8.04	□□□□□ -1.12
RSA3	YLR221C	SPR28	Q04921	423 aa		8.04	□□□□□ -1.12
RSA3	YLR221C	AIM46	P38885	310 aa		8.03	□□□□□ -1.12
RSA3	YLR221C	INP54	Q08227	384 aa	Known RBP	8.03	□□□□□ -1.12
RSA3	YLR221C	PEP7	P32609	515 aa		8.02	□□□□□ -1.13
RSA3	YLR221C	RPS26A	P39938	119 aa	Known RBP	8.02	□□□□□ -1.13
RSA3	YLR221C	RPS26B	P39939	119 aa	Known RBP	8.02	□□□□□ -1.13
RSA3	YLR221C	CYC8	P14922	966 aa		8.01	□□□□□ -1.13
RSA3	YLR221C	CLN2	P20438	545 aa		8.01	□□□□□ -1.13
RSA3	YLR221C	RRM3	P38766	723 aa		8.01	□□□□□ -1.13
RSA3	YLR221C	YER156C	P40093	338 aa	Known RBP	8.01	□□□□□ -1.13
RSA3	YLR221C	MAD1	P40957	749 aa		8.01	□□□□□ -1.13
RSA3	YLR221C	YCS4	Q06156	1176 aa		8.01	□□□□□ -1.13
RSA3	YLR221C	GAS5	Q08193	484 aa		8.01	□□□□□ -1.13
RSA3	YLR221C	FLP1	P03870	423 aa		8	□□□□□ -1.13
RSA3	YLR221C	ECM2	P38241	364 aa	Known RBP	8	□□□□□ -1.13
RSA3	YLR221C	HXK1	P04806	485 aa	Known RBP	7.99	□□□□□ -1.13
RSA3	YLR221C	KAR2	P16474	682 aa	Known RBP	7.99	□□□□□ -1.13
RSA3	YLR221C	NNF1	P47149	201 aa		7.99	□□□□□ -1.13
RSA3	YLR221C	EMG1	Q06287	252 aa	Known RBP	7.99	□□□□□ -1.13
RSA3	YLR221C	AI3	P03877	415 aa		7.98	□□□□□ -1.13
RSA3	YLR221C	RAD2	P07276	1031 aa		7.98	□□□□□ -1.13
RSA3	YLR221C	YIL165C	P40446	119 aa		7.98	□□□□□ -1.13
RSA3	YLR221C	DAL4	Q04895	635 aa		7.98	□□□□□ -1.13
RSA3	YLR221C	MCD1	Q12158	566 aa		7.98	□□□□□ -1.13
RSA3	YLR221C	PRP40	P33203	583 aa	Known RBP	7.97	□□□□□ -1.13
RSA3	YLR221C	MNR2	P35724	969 aa		7.97	□□□□□ -1.13
RSA3	YLR221C	FAA3	P39002	694 aa		7.97	□□□□□ -1.13
RSA3	YLR221C	MAG2	Q06436	670 aa	Known RBP	7.97	□□□□□ -1.13
RSA3	YLR221C	PIN2	Q12057	282 aa		7.97	□□□□□ -1.13
RSA3	YLR221C	PET112	P33893	541 aa		7.96	□□□□□ -1.14
RSA3	YLR221C	MRPS18	P42847	217 aa		7.96	□□□□□ -1.14
RSA3	YLR221C	VPS16	Q03308	798 aa		7.96	□□□□□ -1.14
RSA3	YLR221C	SAC7	P17121	654 aa		7.95	□□□□□ -1.14
RSA3	YLR221C	OCA5	P38738	679 aa		7.95	□□□□□ -1.14
RSA3	YLR221C	MSH6	Q03834	1242 aa		7.95	□□□□□ -1.14
RSA3	YLR221C	TOS4	Q06266	489 aa		7.95	□□□□□ -1.14
RSA3	YLR221C	SLP1	Q12232	587 aa		7.95	□□□□□ -1.14
RSA3	YLR221C	YTA7	P40340	1379 aa		7.95	□□□□□ -1.14
RSA3	YLR221C	CTR9	P89105	1077 aa		7.94	□□□□□ -1.14
RSA3	YLR221C	RSC2	Q06488	889 aa		7.94	□□□□□ -1.14
RSA3	YLR221C	PRE9	P23638	258 aa	Known RBP	7.93	□□□□□ -1.14
RSA3	YLR221C	PYC2	P32327	1180 aa	Known RBP	7.93	□□□□□ -1.14
RSA3	YLR221C	TED1	P40533	473 aa		7.93	□□□□□ -1.14
RSA3	YLR221C	YJL181W	P46987	611 aa		7.93	□□□□□ -1.14
RSA3	YLR221C	SFA1	P32771	386 aa		7.92	□□□□□ -1.14
RSA3	YLR221C	MAC1	P35192	417 aa		7.92	□□□□□ -1.14
RSA3	YLR221C	RVS167	P39743	482 aa	Known RBP	7.92	□□□□□ -1.14
RSA3	YLR221C	PPT1	P53043	513 aa		7.92	□□□□□ -1.14

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms