RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W URB1P34241 1764 aaKnown RBP8.76□□□□□ -1.01
SNF7YLR025W NUP133P36161 1157 aa8.75□□□□□ -1.01
SNF7YLR025W YGR122WP53272 402 aa8.75□□□□□ -1.01
SNF7YLR025W INP54Q08227 384 aaKnown RBP8.75□□□□□ -1.01
SNF7YLR025W RSF2P46974 1380 aa8.74□□□□□ -1.01
SNF7YLR025W YDJ1P25491 409 aaKnown RBP8.74□□□□□ -1.01
SNF7YLR025W SWC3P31376 625 aa8.74□□□□□ -1.01
SNF7YLR025W YBP2P53169 641 aa8.74□□□□□ -1.01
SNF7YLR025W GCR2Q01722 534 aa8.74□□□□□ -1.01
SNF7YLR025W RMT2Q03305 412 aa8.74□□□□□ -1.01
SNF7YLR025W VPS64Q03944 604 aa8.74□□□□□ -1.01
SNF7YLR025W LSP1Q12230 341 aaKnown RBP8.74□□□□□ -1.01
SNF7YLR025W ENT1Q12518 454 aa8.74□□□□□ -1.01
SNF7YLR025W SRS2P12954 1174 aa8.73□□□□□ -1.01
SNF7YLR025W SDH2P21801 266 aa8.73□□□□□ -1.01
SNF7YLR025W ROX1P25042 368 aa8.73□□□□□ -1.01
SNF7YLR025W BOI2P39969 1040 aa8.73□□□□□ -1.01
SNF7YLR025W CST6P40535 587 aa8.73□□□□□ -1.01
SNF7YLR025W KRI1P42846 591 aaKnown RBP8.73□□□□□ -1.01
SNF7YLR025W YIL177CP40434 1758 aa8.72□□□□□ -1.01
SNF7YLR025W YJL225CP40889 1758 aa8.72□□□□□ -1.01
SNF7YLR025W OSM1P21375 501 aaKnown RBP8.72□□□□□ -1.01
SNF7YLR025W GCD7P32502 381 aaPredicted RBP8.72□□□□□ -1.01
SNF7YLR025W RTG2P32608 588 aaKnown RBP8.72□□□□□ -1.01
SNF7YLR025W YKL133CP36066 463 aa8.72□□□□□ -1.01
SNF7YLR025W BRN1P38170 754 aa8.72□□□□□ -1.01
SNF7YLR025W RRD1P40454 393 aaKnown RBP8.72□□□□□ -1.01
SNF7YLR025W ZDS2P54786 942 aa8.72□□□□□ -1.01
SNF7YLR025W FPR4Q06205 392 aaPredicted RBP8.72□□□□□ -1.01
SNF7YLR025W YEL077CQ3E7X8 1277 aa8.72□□□□□ -1.01
SNF7YLR025W PKH1Q03407 766 aa8.71□□□□□ -1.02
SNF7YLR025W SUP35P05453 685 aaKnown RBP8.7□□□□□ -1.02
SNF7YLR025W MSP1P28737 362 aa8.7□□□□□ -1.02
SNF7YLR025W ARL1P38116 183 aaKnown RBP8.7□□□□□ -1.02
SNF7YLR025W SSF1P38789 453 aaPredicted RBP8.7□□□□□ -1.02
SNF7YLR025W YDR306CQ06640 478 aa8.7□□□□□ -1.02
SNF7YLR025W PDR18P53756 1333 aa8.7□□□□□ -1.02
SNF7YLR025W ENO2P00925 437 aaKnown RBP8.69□□□□□ -1.02
SNF7YLR025W RNR2P09938 399 aaKnown RBP8.69□□□□□ -1.02
SNF7YLR025W TEC1P18412 486 aa8.69□□□□□ -1.02
SNF7YLR025W FIG4P42837 879 aa8.69□□□□□ -1.02
SNF7YLR025W ADE16P54113 591 aaKnown RBP8.69□□□□□ -1.02
SNF7YLR025W SSP2Q08646 371 aa8.69□□□□□ -1.02
SNF7YLR025W CDC16P09798 840 aa8.68□□□□□ -1.02
SNF7YLR025W FRK1Q03002 865 aaPredicted RBP8.68□□□□□ -1.02
SNF7YLR025W RMD1Q03441 430 aa8.68□□□□□ -1.02
SNF7YLR025W ENV9Q08651 330 aa8.68□□□□□ -1.02
SNF7YLR025W ROM2P51862 1356 aaKnown RBP8.68□□□□□ -1.02
SNF7YLR025W VAC17P25591 423 aa8.67□□□□□ -1.02
SNF7YLR025W YGL081WP53156 320 aa8.67□□□□□ -1.02
SNF7YLR025W TPM1P17536 199 aaKnown RBP8.66□□□□□ -1.02
SNF7YLR025W GUT2P32191 649 aa8.66□□□□□ -1.02
SNF7YLR025W MNN4P36044 1178 aa8.66□□□□□ -1.02
SNF7YLR025W UBP12P39538 1254 aa8.66□□□□□ -1.02
SNF7YLR025W BRE1Q07457 700 aaKnown RBP8.66□□□□□ -1.02
SNF7YLR025W MCM16Q12262 181 aa8.66□□□□□ -1.02
SNF7YLR025W LPD1P09624 499 aaKnown RBP8.65□□□□□ -1.02
SNF7YLR025W HXT13P39924 564 aa8.65□□□□□ -1.02
SNF7YLR025W MLC1P53141 149 aa8.65□□□□□ -1.02
SNF7YLR025W MDG1P53885 366 aa8.65□□□□□ -1.02
SNF7YLR025W STE20Q03497 939 aaKnown RBP8.65□□□□□ -1.02
SNF7YLR025W YPR204WQ08995 1032 aa8.65□□□□□ -1.02
SNF7YLR025W SWI1P09547 1314 aa8.64□□□□□ -1.03
SNF7YLR025W AMS1P22855 1083 aa8.64□□□□□ -1.03
SNF7YLR025W SLN1P39928 1220 aaPredicted RBP8.64□□□□□ -1.03
SNF7YLR025W RIM21P48565 533 aa8.64□□□□□ -1.03
SNF7YLR025W FRA1Q07825 749 aa8.64□□□□□ -1.03
SNF7YLR025W BIK1P11709 440 aa8.63□□□□□ -1.03
SNF7YLR025W ECM21P38167 1117 aaKnown RBP8.63□□□□□ -1.03
SNF7YLR025W HXT17P53631 564 aa8.63□□□□□ -1.03
SNF7YLR025W MRX10Q05648 414 aa8.63□□□□□ -1.03
SNF7YLR025W IMH1Q06704 911 aaKnown RBP8.63□□□□□ -1.03
SNF7YLR025W YPR084WQ06821 456 aa8.63□□□□□ -1.03
SNF7YLR025W PSH1Q12161 406 aa8.63□□□□□ -1.03
SNF7YLR025W NOT3P06102 836 aaKnown RBP8.62□□□□□ -1.03
SNF7YLR025W GRX1P25373 110 aaKnown RBP8.62□□□□□ -1.03
SNF7YLR025W APL2P36000 726 aaPredicted RBP8.62□□□□□ -1.03
SNF7YLR025W STM1P39015 273 aaKnown RBP8.62□□□□□ -1.03
SNF7YLR025W EMP47P43555 445 aa8.62□□□□□ -1.03
SNF7YLR025W SYH1Q02875 849 aaKnown RBP8.62□□□□□ -1.03
SNF7YLR025W VPS20Q04272 221 aa8.62□□□□□ -1.03
SNF7YLR025W SNU66Q12420 587 aaPredicted RBP8.62□□□□□ -1.03
SNF7YLR025W ENO1P00924 437 aaKnown RBP8.61□□□□□ -1.03
SNF7YLR025W KIP2P28743 706 aa8.61□□□□□ -1.03
SNF7YLR025W YJR008WP47085 338 aa8.61□□□□□ -1.03
SNF7YLR025W APP1P53933 587 aa8.61□□□□□ -1.03
SNF7YLR025W PUS5Q06244 254 aa8.61□□□□□ -1.03
SNF7YLR025W RIM20Q12033 661 aa8.61□□□□□ -1.03
SNF7YLR025W IXR1P33417 597 aa8.6□□□□□ -1.03
SNF7YLR025W SIS2P36024 562 aa8.6□□□□□ -1.03
SNF7YLR025W RSM25P40496 264 aa8.6□□□□□ -1.03
SNF7YLR025W YGL242CP53066 181 aa8.6□□□□□ -1.03
SNF7YLR025W PEX14P53112 341 aa8.6□□□□□ -1.03
SNF7YLR025W COBP00163 385 aa8.59□□□□□ -1.03
SNF7YLR025W ISF1P32488 338 aa8.59□□□□□ -1.03
SNF7YLR025W SER1P33330 395 aaKnown RBP8.59□□□□□ -1.03
SNF7YLR025W YJL181WP46987 611 aa8.59□□□□□ -1.03
SNF7YLR025W ARP5P53946 755 aa8.59□□□□□ -1.03
SNF7YLR025W TTI1P36097 1038 aa8.58□□□□□ -1.04
SNF7YLR025W PBY1P38254 753 aa8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms