RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	TAN1	P53072	289 aa	Predicted RBP	4.94	□□□□□ -1.62
NUG1	YER006W	UTP13	Q05946	817 aa	Known RBP	4.94	□□□□□ -1.62
NUG1	YER006W	BCK1	Q01389	1478 aa		4.93	□□□□□ -1.62
NUG1	YER006W	BIO2	P32451	375 aa		4.93	□□□□□ -1.62
NUG1	YER006W	SMC3	P47037	1230 aa		4.93	□□□□□ -1.62
NUG1	YER006W	PET111	P08468	800 aa		4.92	□□□□□ -1.62
NUG1	YER006W	SUP45	P12385	437 aa	Known RBP	4.92	□□□□□ -1.62
NUG1	YER006W	SLA1	P32790	1244 aa		4.92	□□□□□ -1.62
NUG1	YER006W	BRN1	P38170	754 aa		4.92	□□□□□ -1.62
NUG1	YER006W	SOH1	P38633	127 aa		4.92	□□□□□ -1.62
NUG1	YER006W	CEM1	P39525	442 aa		4.92	□□□□□ -1.62
NUG1	YER006W	UTP7	P40055	554 aa	Known RBP	4.92	□□□□□ -1.62
NUG1	YER006W	YNL108C	P53929	270 aa		4.92	□□□□□ -1.62
NUG1	YER006W	PRP3	Q03338	469 aa	Predicted RBP	4.92	□□□□□ -1.62
NUG1	YER006W	ETT1	Q08421	412 aa	Known RBP	4.92	□□□□□ -1.62
NUG1	YER006W	PUS1	Q12211	544 aa	Known RBP	4.92	□□□□□ -1.62
NUG1	YER006W	NOP58	Q12499	511 aa	Known RBP	4.92	□□□□□ -1.62
NUG1	YER006W	AHP1	P38013	176 aa	Known RBP	4.91	□□□□□ -1.62
NUG1	YER006W	YMR265C	Q03508	461 aa	Known RBP	4.91	□□□□□ -1.62
NUG1	YER006W	PHM7	Q12252	991 aa		4.91	□□□□□ -1.62
NUG1	YER006W	IML1	P47170	1584 aa		4.91	□□□□□ -1.62
NUG1	YER006W	DIT1	P21623	536 aa		4.91	□□□□□ -1.62
NUG1	YER006W	ALA1	P40825	983 aa	Known RBP	4.91	□□□□□ -1.62
NUG1	YER006W	HDA3	Q06623	655 aa		4.91	□□□□□ -1.62
NUG1	YER006W	PDR11	P40550	1411 aa		4.9	□□□□□ -1.62
NUG1	YER006W	ENO2	P00925	437 aa	Known RBP	4.9	□□□□□ -1.63
NUG1	YER006W	UBP1	P25037	809 aa		4.9	□□□□□ -1.63
NUG1	YER006W	CDC11	P32458	415 aa		4.9	□□□□□ -1.63
NUG1	YER006W	MDJ1	P35191	511 aa		4.9	□□□□□ -1.63
NUG1	YER006W	UGA2	P38067	497 aa		4.9	□□□□□ -1.63
NUG1	YER006W	YMR124W	P39523	943 aa	Known RBP	4.9	□□□□□ -1.63
NUG1	YER006W	SLX8	P40072	274 aa		4.9	□□□□□ -1.63
NUG1	YER006W	SUM1	P46676	1062 aa		4.9	□□□□□ -1.63
NUG1	YER006W	RPN7	Q06103	429 aa	Known RBP	4.9	□□□□□ -1.63
NUG1	YER006W	TY1A-DR3	Q12441	440 aa		4.9	□□□□□ -1.63
NUG1	YER006W	IPL1	P38991	367 aa		4.89	□□□□□ -1.63
NUG1	YER006W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
NUG1	YER006W	AI1	P03875	834 aa		4.88	□□□□□ -1.63
NUG1	YER006W	MSH3	P25336	1018 aa		4.88	□□□□□ -1.63
NUG1	YER006W	POL5	P39985	1022 aa	Known RBP	4.88	□□□□□ -1.63
NUG1	YER006W	YJL007C	P47080	104 aa		4.88	□□□□□ -1.63
NUG1	YER006W	NSG2	P53898	299 aa		4.88	□□□□□ -1.63
NUG1	YER006W	KRE33	P53914	1056 aa	Known RBP	4.88	□□□□□ -1.63
NUG1	YER006W	DMA2	P53924	522 aa		4.88	□□□□□ -1.63
NUG1	YER006W	SYT1	Q06836	1226 aa		4.88	□□□□□ -1.63
NUG1	YER006W	RRP14	P36080	434 aa	Known RBP	4.87	□□□□□ -1.63
NUG1	YER006W	DSN1	P40568	576 aa		4.87	□□□□□ -1.63
NUG1	YER006W	ADE12	P80210	433 aa	Known RBP	4.87	□□□□□ -1.63
NUG1	YER006W	THI72	Q08579	599 aa		4.87	□□□□□ -1.63
NUG1	YER006W	YDR461C-A	Q2V2P7	80 aa		4.87	□□□□□ -1.63
NUG1	YER006W	SNF7	P39929	240 aa	Known RBP	4.87	□□□□□ -1.63
NUG1	YER006W	RIM21	P48565	533 aa		4.87	□□□□□ -1.63
NUG1	YER006W	IMH1	Q06704	911 aa	Known RBP	4.87	□□□□□ -1.63
NUG1	YER006W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
NUG1	YER006W	ENT1	Q12518	454 aa		4.87	□□□□□ -1.63
NUG1	YER006W	IRE1	P32361	1115 aa		4.86	□□□□□ -1.63
NUG1	YER006W	PEA2	P40091	420 aa		4.86	□□□□□ -1.63
NUG1	YER006W	LSB3	P43603	459 aa	Known RBP	4.86	□□□□□ -1.63
NUG1	YER006W	JJJ2	P46997	583 aa		4.86	□□□□□ -1.63
NUG1	YER006W	RTS3	P53289	263 aa		4.86	□□□□□ -1.63
NUG1	YER006W	NOP8	Q08287	484 aa	Predicted RBP	4.86	□□□□□ -1.63
NUG1	YER006W	RAD26	P40352	1085 aa		4.85	□□□□□ -1.63
NUG1	YER006W	APL5	Q08951	932 aa	Known RBP	4.85	□□□□□ -1.63
NUG1	YER006W	HOS4	P40480	1083 aa		4.84	□□□□□ -1.63
NUG1	YER006W	YFL066C	P43538	392 aa		4.84	□□□□□ -1.63
NUG1	YER006W	HGH1	P48362	394 aa	Known RBP	4.84	□□□□□ -1.63
NUG1	YER006W	TPO2	P53283	614 aa		4.84	□□□□□ -1.63
NUG1	YER006W	ECM16	Q04217	1267 aa	Known RBP	4.84	□□□□□ -1.63
NUG1	YER006W	SWI5	P08153	709 aa		4.83	□□□□□ -1.64
NUG1	YER006W	RDS2	P19541	446 aa	Known RBP	4.83	□□□□□ -1.64
NUG1	YER006W	DEP1	P31385	405 aa		4.83	□□□□□ -1.64
NUG1	YER006W	KIP3	P53086	805 aa	Known RBP	4.83	□□□□□ -1.64
NUG1	YER006W	YVC1	Q12324	675 aa		4.83	□□□□□ -1.64
NUG1	YER006W	RPC31	P17890	251 aa		4.82	□□□□□ -1.64
NUG1	YER006W	BYE1	P36106	594 aa		4.82	□□□□□ -1.64
NUG1	YER006W	SHM1	P37292	490 aa	Predicted RBP	4.82	□□□□□ -1.64
NUG1	YER006W	AIM9	P40053	627 aa	Known RBP	4.82	□□□□□ -1.64
NUG1	YER006W	YFL034W	P43564	1073 aa		4.82	□□□□□ -1.64
NUG1	YER006W	OSW7	P43611	510 aa		4.82	□□□□□ -1.64
NUG1	YER006W	CTR9	P89105	1077 aa		4.82	□□□□□ -1.64
NUG1	YER006W	YLL054C	Q12244	843 aa		4.82	□□□□□ -1.64
NUG1	YER006W	YRF1-2	P40105	1681 aa		4.82	□□□□□ -1.64
NUG1	YER006W	PRS1	P32895	427 aa	Known RBP	4.82	□□□□□ -1.64
NUG1	YER006W	CAT8	P39113	1433 aa		4.82	□□□□□ -1.64
NUG1	YER006W	BIM1	P40013	344 aa		4.82	□□□□□ -1.64
NUG1	YER006W	SEC9	P40357	651 aa		4.82	□□□□□ -1.64
NUG1	YER006W	RRP15	Q06511	250 aa	Predicted RBP	4.82	□□□□□ -1.64
NUG1	YER006W	FPS1	P23900	669 aa		4.81	□□□□□ -1.64
NUG1	YER006W	PDC6	P26263	563 aa	Known RBP	4.81	□□□□□ -1.64
NUG1	YER006W	SAP190	P36123	1033 aa		4.81	□□□□□ -1.64
NUG1	YER006W	MRPL16	P38064	232 aa		4.81	□□□□□ -1.64
NUG1	YER006W	ISW1	P38144	1129 aa		4.81	□□□□□ -1.64
NUG1	YER006W	SIC1	P38634	284 aa		4.81	□□□□□ -1.64
NUG1	YER006W	YPQ2	Q06328	317 aa		4.81	□□□□□ -1.64
NUG1	YER006W	OPY1	P38271	328 aa		4.8	□□□□□ -1.64
NUG1	YER006W	ATG32	P40458	529 aa		4.8	□□□□□ -1.64
NUG1	YER006W	RPL34B	P40525	121 aa	Known RBP	4.8	□□□□□ -1.64
NUG1	YER006W	RCF1	Q03713	159 aa		4.8	□□□□□ -1.64
NUG1	YER006W	MRX10	Q05648	414 aa		4.8	□□□□□ -1.64
NUG1	YER006W	BUD21	Q08492	214 aa	Predicted RBP	4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms