RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeast

Gene SPG3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPG3	YDR504C	TSA1	P34760	196 aa	Known RBP	4.8	□□□□□ -1.64
SPG3	YDR504C	YPT53	P36019	220 aa		4.8	□□□□□ -1.64
SPG3	YDR504C	YIL165C	P40446	119 aa		4.8	□□□□□ -1.64
SPG3	YDR504C	INP51	P40559	946 aa	Known RBP	4.8	□□□□□ -1.64
SPG3	YDR504C	FOX2	Q02207	900 aa	Known RBP	4.8	□□□□□ -1.64
SPG3	YDR504C	VAN1	P23642	535 aa		4.79	□□□□□ -1.64
SPG3	YDR504C	FLR1	P38124	548 aa		4.79	□□□□□ -1.64
SPG3	YDR504C	RPL34B	P40525	121 aa	Known RBP	4.79	□□□□□ -1.64
SPG3	YDR504C	TFA2	P36145	328 aa		4.78	□□□□□ -1.64
SPG3	YDR504C	POL5	P39985	1022 aa	Known RBP	4.78	□□□□□ -1.64
SPG3	YDR504C	GAL2	P13181	574 aa		4.77	□□□□□ -1.65
SPG3	YDR504C	MAE1	P36013	669 aa	Known RBP	4.77	□□□□□ -1.65
SPG3	YDR504C	CWH41	P53008	833 aa		4.77	□□□□□ -1.65
SPG3	YDR504C	LDH1	P38139	375 aa		4.76	□□□□□ -1.65
SPG3	YDR504C	ISW1	P38144	1129 aa		4.76	□□□□□ -1.65
SPG3	YDR504C	BIO5	P53744	561 aa	Known RBP	4.76	□□□□□ -1.65
SPG3	YDR504C	GUP1	P53154	560 aa		4.75	□□□□□ -1.65
SPG3	YDR504C	GIC2	Q06648	383 aa		4.75	□□□□□ -1.65
SPG3	YDR504C	ERS1	P17261	260 aa		4.74	□□□□□ -1.65
SPG3	YDR504C	KIP3	P53086	805 aa	Known RBP	4.74	□□□□□ -1.65
SPG3	YDR504C	SOG2	Q08817	791 aa		4.74	□□□□□ -1.65
SPG3	YDR504C	ELG1	Q12050	791 aa		4.74	□□□□□ -1.65
SPG3	YDR504C	TRS33	Q99394	268 aa		4.74	□□□□□ -1.65
SPG3	YDR504C	MSN1	P22148	382 aa		4.73	□□□□□ -1.65
SPG3	YDR504C	YBR197C	P38306	217 aa		4.73	□□□□□ -1.65
SPG3	YDR504C	LEM3	P42838	414 aa		4.73	□□□□□ -1.65
SPG3	YDR504C	ALD3	P54114	506 aa		4.73	□□□□□ -1.65
SPG3	YDR504C	EMG1	Q06287	252 aa	Known RBP	4.73	□□□□□ -1.65
SPG3	YDR504C	HSP78	P33416	811 aa		4.72	□□□□□ -1.65
SPG3	YDR504C	SPO71	Q03868	1245 aa		4.71	□□□□□ -1.66
SPG3	YDR504C	PRP6	P19735	899 aa	Predicted RBP	4.69	□□□□□ -1.66
SPG3	YDR504C	ISC10	P32645	267 aa		4.69	□□□□□ -1.66
SPG3	YDR504C	WHI3	P34761	661 aa	Known RBP	4.69	□□□□□ -1.66
SPG3	YDR504C	NEO1	P40527	1151 aa		4.69	□□□□□ -1.66
SPG3	YDR504C	ECM23	Q02710	187 aa		4.69	□□□□□ -1.66
SPG3	YDR504C	MSH6	Q03834	1242 aa		4.69	□□□□□ -1.66
SPG3	YDR504C	GSF2	Q04697	403 aa	Known RBP	4.69	□□□□□ -1.66
SPG3	YDR504C	FUS1	P11710	512 aa		4.68	□□□□□ -1.66
SPG3	YDR504C	BOI1	P38041	980 aa	Known RBP	4.68	□□□□□ -1.66
SPG3	YDR504C	NSI1	Q12457	570 aa		4.68	□□□□□ -1.66
SPG3	YDR504C	MMM1	P41800	426 aa		4.67	□□□□□ -1.66
SPG3	YDR504C	SIS2	P36024	562 aa		4.66	□□□□□ -1.66
SPG3	YDR504C	TGL4	P36165	910 aa		4.66	□□□□□ -1.66
SPG3	YDR504C	AIM46	P38885	310 aa		4.66	□□□□□ -1.66
SPG3	YDR504C	NFS1	P25374	497 aa		4.65	□□□□□ -1.67
SPG3	YDR504C	ALD4	P46367	519 aa	Known RBP	4.65	□□□□□ -1.67
SPG3	YDR504C	YJR124C	P47159	448 aa		4.65	□□□□□ -1.67
SPG3	YDR504C	HAS1	Q03532	505 aa	Known RBP	4.65	□□□□□ -1.67
SPG3	YDR504C	UBX7	P38349	436 aa		4.64	□□□□□ -1.67
SPG3	YDR504C	CIT3	P43635	486 aa		4.64	□□□□□ -1.67
SPG3	YDR504C	GPT2	P36148	743 aa		4.63	□□□□□ -1.67
SPG3	YDR504C	HVG1	P0CE11	249 aa		4.62	□□□□□ -1.67
SPG3	YDR504C	ABZ1	P37254	787 aa	Predicted RBP	4.62	□□□□□ -1.67
SPG3	YDR504C	FIR1	P40020	876 aa		4.62	□□□□□ -1.67
SPG3	YDR504C	RGD2	P43556	714 aa		4.62	□□□□□ -1.67
SPG3	YDR504C	RCM1	P53972	490 aa		4.62	□□□□□ -1.67
SPG3	YDR504C	AIM3	P38266	947 aa	Known RBP	4.61	□□□□□ -1.67
SPG3	YDR504C	HXT8	P40886	569 aa		4.61	□□□□□ -1.67
SPG3	YDR504C	OYE3	P41816	400 aa	Predicted RBP	4.61	□□□□□ -1.67
SPG3	YDR504C	FAR11	P53917	953 aa		4.61	□□□□□ -1.67
SPG3	YDR504C	YOR223W	Q12015	292 aa		4.61	□□□□□ -1.67
SPG3	YDR504C	YMR074C	Q04773	145 aa		4.6	□□□□□ -1.67
SPG3	YDR504C	KTR2	P33550	425 aa		4.59	□□□□□ -1.67
SPG3	YDR504C	YBR287W	P38355	427 aa		4.59	□□□□□ -1.67
SPG3	YDR504C	YML122C	Q03207	126 aa		4.59	□□□□□ -1.67
SPG3	YDR504C	GLO4	Q12320	285 aa		4.59	□□□□□ -1.67
SPG3	YDR504C	PNS1	Q12412	539 aa		4.58	□□□□□ -1.68
SPG3	YDR504C	FET4	P40988	552 aa		4.57	□□□□□ -1.68
SPG3	YDR504C	DOT1	Q04089	582 aa	Known RBP	4.57	□□□□□ -1.68
SPG3	YDR504C	PUN1	Q06991	263 aa		4.57	□□□□□ -1.68
SPG3	YDR504C	YOR059C	Q08448	450 aa	Known RBP	4.57	□□□□□ -1.68
SPG3	YDR504C	TTI1	P36097	1038 aa		4.56	□□□□□ -1.68
SPG3	YDR504C	ADP1	P25371	1049 aa		4.55	□□□□□ -1.68
SPG3	YDR504C	SUT1	P53032	299 aa	Known RBP	4.55	□□□□□ -1.68
SPG3	YDR504C	ORC3	P54790	616 aa		4.55	□□□□□ -1.68
SPG3	YDR504C	SSY1	Q03770	852 aa		4.55	□□□□□ -1.68
SPG3	YDR504C	TIF6	Q12522	245 aa	Known RBP	4.55	□□□□□ -1.68
SPG3	YDR504C	TUB2	P02557	457 aa	Known RBP	4.54	□□□□□ -1.68
SPG3	YDR504C	PYC2	P32327	1180 aa	Known RBP	4.54	□□□□□ -1.68
SPG3	YDR504C	NTA1	P40354	457 aa		4.54	□□□□□ -1.68
SPG3	YDR504C	HGH1	P48362	394 aa	Known RBP	4.54	□□□□□ -1.68
SPG3	YDR504C	RPS4A	P0CX35	261 aa	Known RBP	4.53	□□□□□ -1.68
SPG3	YDR504C	RPS4B	P0CX36	261 aa	Known RBP	4.53	□□□□□ -1.68
SPG3	YDR504C	RIM8	P53179	542 aa		4.53	□□□□□ -1.68
SPG3	YDR504C	EAR1	Q03212	550 aa		4.53	□□□□□ -1.68
SPG3	YDR504C	LPX1	Q12405	387 aa	Known RBP	4.53	□□□□□ -1.68
SPG3	YDR504C	TOD6	P34219	525 aa		4.51	□□□□□ -1.69
SPG3	YDR504C	RAD55	P38953	406 aa		4.51	□□□□□ -1.69
SPG3	YDR504C	MRPL22	P53881	309 aa		4.51	□□□□□ -1.69
SPG3	YDR504C	PUF6	Q04373	656 aa	Known RBP	4.51	□□□□□ -1.69
SPG3	YDR504C	TRE1	Q08919	783 aa		4.51	□□□□□ -1.69
SPG3	YDR504C	SRS2	P12954	1174 aa		4.5	□□□□□ -1.69
SPG3	YDR504C	RPB10	P22139	70 aa		4.5	□□□□□ -1.69
SPG3	YDR504C	PRO1	P32264	428 aa		4.5	□□□□□ -1.69
SPG3	YDR504C	PSY2	P40164	858 aa		4.5	□□□□□ -1.69
SPG3	YDR504C	YDL177C	Q12257	170 aa		4.5	□□□□□ -1.69
SPG3	YDR504C	IRS4	P36115	615 aa	Known RBP	4.49	□□□□□ -1.69
SPG3	YDR504C	SHM2	P37291	469 aa	Known RBP	4.49	□□□□□ -1.69
SPG3	YDR504C	PEX7	P39108	375 aa		4.49	□□□□□ -1.69
SPG3	YDR504C	APC11	Q12157	165 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 73.2 ms