RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C TFA2P36145 328 aa6.2□□□□□ -1.42
SPR28YDR218C SSF1P38789 453 aaPredicted RBP6.2□□□□□ -1.42
SPR28YDR218C NUG1P40010 520 aaKnown RBP6.2□□□□□ -1.42
SPR28YDR218C DOS2P54858 310 aa6.2□□□□□ -1.42
SPR28YDR218C TY1A-NL1Q12391 440 aaKnown RBP6.2□□□□□ -1.42
SPR28YDR218C TY4A-HQ6Q5P6 413 aa6.2□□□□□ -1.42
SPR28YDR218C RPB10P22139 70 aa6.19□□□□□ -1.42
SPR28YDR218C RGD2P43556 714 aa6.19□□□□□ -1.42
SPR28YDR218C INP52P50942 1183 aa6.19□□□□□ -1.42
SPR28YDR218C MAC1P35192 417 aa6.18□□□□□ -1.42
SPR28YDR218C SPC42P36094 363 aa6.18□□□□□ -1.42
SPR28YDR218C HXT8P40886 569 aa6.18□□□□□ -1.42
SPR28YDR218C RTS3P53289 263 aa6.18□□□□□ -1.42
SPR28YDR218C PNP1Q05788 311 aa6.18□□□□□ -1.42
SPR28YDR218C FPR4Q06205 392 aaPredicted RBP6.18□□□□□ -1.42
SPR28YDR218C RSC2Q06488 889 aa6.18□□□□□ -1.42
SPR28YDR218C APC11Q12157 165 aa6.18□□□□□ -1.42
SPR28YDR218C INP51P40559 946 aaKnown RBP6.17□□□□□ -1.42
SPR28YDR218C ALD3P54114 506 aa6.17□□□□□ -1.42
SPR28YDR218C SUT1P53032 299 aaKnown RBP6.16□□□□□ -1.42
SPR28YDR218C VPS72Q03388 795 aa6.16□□□□□ -1.42
SPR28YDR218C YKR073CP36153 106 aa6.15□□□□□ -1.42
SPR28YDR218C OMA1P36163 345 aa6.15□□□□□ -1.42
SPR28YDR218C BIO5P53744 561 aaKnown RBP6.15□□□□□ -1.42
SPR28YDR218C FAR11P53917 953 aa6.15□□□□□ -1.42
SPR28YDR218C YLR122CQ12312 125 aa6.15□□□□□ -1.42
SPR28YDR218C TRP3P00937 484 aa6.14□□□□□ -1.43
SPR28YDR218C PAN5P38787 379 aa6.14□□□□□ -1.43
SPR28YDR218C BOL3P39724 118 aa6.14□□□□□ -1.43
SPR28YDR218C SEN54Q02825 467 aaPredicted RBP6.14□□□□□ -1.43
SPR28YDR218C HAT1Q12341 374 aa6.14□□□□□ -1.43
SPR28YDR218C AIM46P38885 310 aa6.13□□□□□ -1.43
SPR28YDR218C FUS1P11710 512 aa6.12□□□□□ -1.43
SPR28YDR218C RSC6P25632 483 aa6.12□□□□□ -1.43
SPR28YDR218C COQ2P32378 372 aa6.12□□□□□ -1.43
SPR28YDR218C OCA5P38738 679 aa6.12□□□□□ -1.43
SPR28YDR218C NNF1P47149 201 aa6.12□□□□□ -1.43
SPR28YDR218C YAF9P53930 226 aa6.12□□□□□ -1.43
SPR28YDR218C SOG2Q08817 791 aa6.12□□□□□ -1.43
SPR28YDR218C TIF6Q12522 245 aaKnown RBP6.12□□□□□ -1.43
SPR28YDR218C LSO1Q3E827 93 aa6.12□□□□□ -1.43
SPR28YDR218C SEC20P28791 383 aa6.11□□□□□ -1.43
SPR28YDR218C NMD2P38798 1089 aaKnown RBP6.11□□□□□ -1.43
SPR28YDR218C STM1P39015 273 aaKnown RBP6.11□□□□□ -1.43
SPR28YDR218C FIR1P40020 876 aa6.11□□□□□ -1.43
SPR28YDR218C NTA1P40354 457 aa6.11□□□□□ -1.43
SPR28YDR218C REC8Q12188 680 aa6.11□□□□□ -1.43
SPR28YDR218C NAM7P30771 971 aaKnown RBP6.1□□□□□ -1.43
SPR28YDR218C AKR1P39010 764 aa6.1□□□□□ -1.43
SPR28YDR218C DSE4P53753 1117 aa6.1□□□□□ -1.43
SPR28YDR218C KAE1P36132 386 aa6.09□□□□□ -1.43
SPR28YDR218C SAF1P38352 637 aa6.09□□□□□ -1.43
SPR28YDR218C RAD55P38953 406 aa6.09□□□□□ -1.43
SPR28YDR218C POL5P39985 1022 aaKnown RBP6.09□□□□□ -1.43
SPR28YDR218C YJR008WP47085 338 aa6.09□□□□□ -1.43
SPR28YDR218C HVG1P0CE11 249 aa6.08□□□□□ -1.44
SPR28YDR218C GUP1P53154 560 aa6.08□□□□□ -1.44
SPR28YDR218C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
SPR28YDR218C PSY2P40164 858 aa6.07□□□□□ -1.44
SPR28YDR218C SVF1Q05515 481 aa6.07□□□□□ -1.44
SPR28YDR218C MED7Q08278 222 aa6.07□□□□□ -1.44
SPR28YDR218C PYC2P32327 1180 aaKnown RBP6.06□□□□□ -1.44
SPR28YDR218C RRP14P36080 434 aaKnown RBP6.06□□□□□ -1.44
SPR28YDR218C TOS1P38288 455 aa6.06□□□□□ -1.44
SPR28YDR218C YJR124CP47159 448 aa6.06□□□□□ -1.44
SPR28YDR218C CTH1P47976 325 aa6.06□□□□□ -1.44
SPR28YDR218C YGR130CP53278 816 aa6.06□□□□□ -1.44
SPR28YDR218C YNR065CP53751 1116 aa6.06□□□□□ -1.44
SPR28YDR218C ERS1P17261 260 aa6.05□□□□□ -1.44
SPR28YDR218C SWE1P32944 819 aa6.05□□□□□ -1.44
SPR28YDR218C IRS4P36115 615 aaKnown RBP6.05□□□□□ -1.44
SPR28YDR218C NCE103P53615 221 aa6.05□□□□□ -1.44
SPR28YDR218C GLO4Q12320 285 aa6.05□□□□□ -1.44
SPR28YDR218C FUR4P05316 633 aaKnown RBP6.04□□□□□ -1.44
SPR28YDR218C YBR287WP38355 427 aa6.04□□□□□ -1.44
SPR28YDR218C IPL1P38991 367 aa6.04□□□□□ -1.44
SPR28YDR218C LEM3P42838 414 aa6.04□□□□□ -1.44
SPR28YDR218C OSW7P43611 510 aa6.04□□□□□ -1.44
SPR28YDR218C HAS1Q03532 505 aaKnown RBP6.04□□□□□ -1.44
SPR28YDR218C ELG1Q12050 791 aa6.04□□□□□ -1.44
SPR28YDR218C CHS2P14180 963 aa6.03□□□□□ -1.44
SPR28YDR218C SMC1P32908 1225 aa6.03□□□□□ -1.44
SPR28YDR218C NEO1P40527 1151 aa6.03□□□□□ -1.44
SPR28YDR218C CTR9P89105 1077 aa6.03□□□□□ -1.44
SPR28YDR218C COBP00163 385 aa6.02□□□□□ -1.45
SPR28YDR218C MAE1P36013 669 aaKnown RBP6.02□□□□□ -1.45
SPR28YDR218C NAB3P38996 802 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
SPR28YDR218C ATG36P46983 293 aa6.02□□□□□ -1.45
SPR28YDR218C SPO71Q03868 1245 aa6.02□□□□□ -1.45
SPR28YDR218C PUB1P32588 453 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
SPR28YDR218C PPG1P32838 368 aa6.01□□□□□ -1.45
SPR28YDR218C LIP5P32875 414 aa6.01□□□□□ -1.45
SPR28YDR218C SEA4P38164 1038 aa6.01□□□□□ -1.45
SPR28YDR218C FPR3P38911 411 aaKnown RBP6.01□□□□□ -1.45
SPR28YDR218C KIP3P53086 805 aaKnown RBP6□□□□□ -1.45
SPR28YDR218C MAG2Q06436 670 aaKnown RBP6□□□□□ -1.45
SPR28YDR218C BRE4Q07660 1125 aa6□□□□□ -1.45
SPR28YDR218C TOM20P35180 183 aa5.99□□□□□ -1.45
SPR28YDR218C SPO74P45819 413 aa5.99□□□□□ -1.45
SPR28YDR218C POL32P47110 350 aa5.99□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms