RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C DAL1P32375 460 aa6.77□□□□□ -1.33
SCM3YDL139C SSN3P39073 555 aa6.77□□□□□ -1.33
SCM3YDL139C SLX8P40072 274 aa6.77□□□□□ -1.33
SCM3YDL139C YGR035CP53222 116 aa6.77□□□□□ -1.33
SCM3YDL139C NAM8Q00539 523 aaKnown RBP6.77□□□□□ -1.33
SCM3YDL139C YML020WQ03722 664 aa6.77□□□□□ -1.33
SCM3YDL139C HPF1Q05164 967 aa6.76□□□□□ -1.33
SCM3YDL139C AUS1Q08409 1394 aa6.76□□□□□ -1.33
SCM3YDL139C CCP1P00431 361 aa6.75□□□□□ -1.33
SCM3YDL139C ALA1P40825 983 aaKnown RBP6.75□□□□□ -1.33
SCM3YDL139C VTC4P47075 721 aa6.75□□□□□ -1.33
SCM3YDL139C YNR029CP53729 429 aaKnown RBP6.75□□□□□ -1.33
SCM3YDL139C GAL2P13181 574 aa6.74□□□□□ -1.33
SCM3YDL139C FUN12P39730 1002 aaKnown RBP6.74□□□□□ -1.33
SCM3YDL139C SUM1P46676 1062 aa6.74□□□□□ -1.33
SCM3YDL139C APC1P53886 1748 aa6.73□□□□□ -1.33
SCM3YDL139C PRS1P32895 427 aaKnown RBP6.73□□□□□ -1.33
SCM3YDL139C AIM9P40053 627 aaKnown RBP6.73□□□□□ -1.33
SCM3YDL139C MSN5P52918 1224 aa6.73□□□□□ -1.33
SCM3YDL139C RRP46P53256 223 aaPredicted RBP6.73□□□□□ -1.33
SCM3YDL139C URN1Q06525 465 aaKnown RBP6.73□□□□□ -1.33
SCM3YDL139C TY1A-DR3Q12441 440 aa6.73□□□□□ -1.33
SCM3YDL139C CDC3P32457 520 aaKnown RBP6.72□□□□□ -1.33
SCM3YDL139C UBX7P38349 436 aa6.72□□□□□ -1.33
SCM3YDL139C CHZ1P40019 153 aaPredicted RBP6.72□□□□□ -1.33
SCM3YDL139C NOP8Q08287 484 aaPredicted RBP6.72□□□□□ -1.33
SCM3YDL139C PSK1P31374 1356 aa6.71□□□□□ -1.33
SCM3YDL139C SWI5P08153 709 aa6.71□□□□□ -1.34
SCM3YDL139C PDI1P17967 522 aaKnown RBP6.71□□□□□ -1.34
SCM3YDL139C SLA1P32790 1244 aa6.71□□□□□ -1.34
SCM3YDL139C AHP1P38013 176 aaKnown RBP6.71□□□□□ -1.34
SCM3YDL139C PHO87P25360 923 aa6.7□□□□□ -1.34
SCM3YDL139C TRK2P28584 889 aa6.7□□□□□ -1.34
SCM3YDL139C NTH2P35172 780 aa6.7□□□□□ -1.34
SCM3YDL139C THI12P42883 340 aa6.7□□□□□ -1.34
SCM3YDL139C THI5P43534 340 aa6.7□□□□□ -1.34
SCM3YDL139C THI11P47183 340 aa6.7□□□□□ -1.34
SCM3YDL139C ACS2P52910 683 aaKnown RBP6.7□□□□□ -1.34
SCM3YDL139C THI13Q07748 340 aa6.7□□□□□ -1.34
SCM3YDL139C FKS3Q04952 1785 aa6.69□□□□□ -1.34
SCM3YDL139C RPS6AP0CX37 236 aaKnown RBP6.69□□□□□ -1.34
SCM3YDL139C RPS6BP0CX38 236 aaPredicted RBP6.69□□□□□ -1.34
SCM3YDL139C CUZ1P53899 274 aa6.69□□□□□ -1.34
SCM3YDL139C HIM1Q06674 414 aa6.69□□□□□ -1.34
SCM3YDL139C ENP1P38333 483 aaKnown RBP6.68□□□□□ -1.34
SCM3YDL139C YFL034WP43564 1073 aa6.68□□□□□ -1.34
SCM3YDL139C JJJ2P46997 583 aa6.68□□□□□ -1.34
SCM3YDL139C UBP15P50101 1230 aa6.68□□□□□ -1.34
SCM3YDL139C SHM1P37292 490 aaPredicted RBP6.67□□□□□ -1.34
SCM3YDL139C ROM1P53046 1155 aa6.67□□□□□ -1.34
SCM3YDL139C YRF1-3P0CX14 1859 aa6.66□□□□□ -1.34
SCM3YDL139C YRF1-7P0CX15 1859 aa6.66□□□□□ -1.34
SCM3YDL139C YRF1-6P53819 1859 aa6.66□□□□□ -1.34
SCM3YDL139C HAP4P14064 554 aa6.66□□□□□ -1.34
SCM3YDL139C IRE1P32361 1115 aa6.66□□□□□ -1.34
SCM3YDL139C TSC13Q99190 310 aa6.66□□□□□ -1.34
SCM3YDL139C SEC3P33332 1336 aaKnown RBP6.66□□□□□ -1.34
SCM3YDL139C ADE6P38972 1358 aaKnown RBP6.66□□□□□ -1.34
SCM3YDL139C TPS3P38426 1054 aaKnown RBP6.65□□□□□ -1.34
SCM3YDL139C YMR265CQ03508 461 aaKnown RBP6.65□□□□□ -1.34
SCM3YDL139C YPQ2Q06328 317 aa6.65□□□□□ -1.34
SCM3YDL139C HAT1Q12341 374 aa6.65□□□□□ -1.34
SCM3YDL139C RPS24AP0CX31 135 aaKnown RBP6.64□□□□□ -1.35
SCM3YDL139C RPS24BP0CX32 135 aaKnown RBP6.64□□□□□ -1.35
SCM3YDL139C SSF1P38789 453 aaPredicted RBP6.64□□□□□ -1.35
SCM3YDL139C LYS5P50113 272 aa6.64□□□□□ -1.35
SCM3YDL139C GAS4Q08271 471 aa6.64□□□□□ -1.35
SCM3YDL139C CEM1P39525 442 aa6.63□□□□□ -1.35
SCM3YDL139C CWC15Q03772 175 aaKnown RBP6.63□□□□□ -1.35
SCM3YDL139C DPH6Q12429 685 aa6.63□□□□□ -1.35
SCM3YDL139C RPS31P05759 152 aaKnown RBP6.61□□□□□ -1.35
SCM3YDL139C CYT1P07143 309 aa6.61□□□□□ -1.35
SCM3YDL139C DIT1P21623 536 aa6.61□□□□□ -1.35
SCM3YDL139C MPP10P47083 593 aaKnown RBP6.61□□□□□ -1.35
SCM3YDL139C KRE33P53914 1056 aaKnown RBP6.61□□□□□ -1.35
SCM3YDL139C PUF6Q04373 656 aaKnown RBP6.61□□□□□ -1.35
SCM3YDL139C PSH1Q12161 406 aa6.61□□□□□ -1.35
SCM3YDL139C SUI2P20459 304 aaKnown RBP6.6□□□□□ -1.35
SCM3YDL139C PDC6P26263 563 aaKnown RBP6.6□□□□□ -1.35
SCM3YDL139C JJJ3P47138 172 aa6.6□□□□□ -1.35
SCM3YDL139C YNL165WP53891 406 aa6.6□□□□□ -1.35
SCM3YDL139C ADE12P80210 433 aaKnown RBP6.6□□□□□ -1.35
SCM3YDL139C YRF1-4O13559 1382 aa6.59□□□□□ -1.35
SCM3YDL139C VAN1P23642 535 aa6.58□□□□□ -1.36
SCM3YDL139C PUN1Q06991 263 aa6.58□□□□□ -1.36
SCM3YDL139C MCM1P11746 286 aa6.57□□□□□ -1.36
SCM3YDL139C MRPL16P38064 232 aa6.57□□□□□ -1.36
SCM3YDL139C KAR5Q04746 504 aa6.57□□□□□ -1.36
SCM3YDL139C PNP1Q05788 311 aa6.57□□□□□ -1.36
SCM3YDL139C THI22Q06490 572 aa6.57□□□□□ -1.36
SCM3YDL139C SYT1Q06836 1226 aa6.57□□□□□ -1.36
SCM3YDL139C YBL113CQ7M4S9 792 aa6.57□□□□□ -1.36
SCM3YDL139C MLF3P32047 452 aa6.56□□□□□ -1.36
SCM3YDL139C SEN54Q02825 467 aaPredicted RBP6.56□□□□□ -1.36
SCM3YDL139C STB3Q12427 513 aa6.56□□□□□ -1.36
SCM3YDL139C RVB2Q12464 471 aaKnown RBP6.56□□□□□ -1.36
SCM3YDL139C Q0182Q9ZZW1 134 aa6.56□□□□□ -1.36
SCM3YDL139C SRS2P12954 1174 aa6.55□□□□□ -1.36
SCM3YDL139C UBP1P25037 809 aa6.55□□□□□ -1.36
SCM3YDL139C SUV3P32580 737 aa6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms