RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeastyeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR2YDL042C JIP5Q06214 492 aaPredicted RBP8.59□□□□□ -1.03
SIR2YDL042C RSC2Q06488 889 aa8.59□□□□□ -1.03
SIR2YDL042C CYC8P14922 966 aa8.58□□□□□ -1.04
SIR2YDL042C IDI1P15496 288 aa8.58□□□□□ -1.04
SIR2YDL042C NAP1P25293 417 aaKnown RBP8.58□□□□□ -1.04
SIR2YDL042C MSC7P38694 644 aa8.58□□□□□ -1.04
SIR2YDL042C FAA3P39002 694 aa8.58□□□□□ -1.04
SIR2YDL042C ACO2P39533 789 aa8.58□□□□□ -1.04
SIR2YDL042C YIR007WP40566 764 aa8.58□□□□□ -1.04
SIR2YDL042C ADE12P80210 433 aaKnown RBP8.58□□□□□ -1.04
SIR2YDL042C CCP1P00431 361 aa8.57□□□□□ -1.04
SIR2YDL042C HXK1P04806 485 aaKnown RBP8.57□□□□□ -1.04
SIR2YDL042C PRP40P33203 583 aaKnown RBP8.57□□□□□ -1.04
SIR2YDL042C RMD1Q03441 430 aa8.57□□□□□ -1.04
SIR2YDL042C NUT1P53114 1132 aa8.56□□□□□ -1.04
SIR2YDL042C YDR461C-AQ2V2P7 80 aa8.56□□□□□ -1.04
SIR2YDL042C RAD2P07276 1031 aa8.56□□□□□ -1.04
SIR2YDL042C KAR2P16474 682 aaKnown RBP8.56□□□□□ -1.04
SIR2YDL042C MON1P53129 644 aa8.56□□□□□ -1.04
SIR2YDL042C CAF120P53836 1060 aa8.56□□□□□ -1.04
SIR2YDL042C MSH6Q03834 1242 aa8.56□□□□□ -1.04
SIR2YDL042C ESF1Q06344 628 aaKnown RBP8.56□□□□□ -1.04
SIR2YDL042C DUR3P33413 735 aa8.55□□□□□ -1.04
SIR2YDL042C CEM1P39525 442 aa8.54□□□□□ -1.04
SIR2YDL042C RVS167P39743 482 aaKnown RBP8.54□□□□□ -1.04
SIR2YDL042C YJL181WP46987 611 aa8.54□□□□□ -1.04
SIR2YDL042C FUS1P11710 512 aa8.53□□□□□ -1.04
SIR2YDL042C MRPS18P42847 217 aa8.53□□□□□ -1.04
SIR2YDL042C TY1A-DR2Q03964 440 aaKnown RBP8.53□□□□□ -1.04
SIR2YDL042C SYT1Q06836 1226 aa8.53□□□□□ -1.04
SIR2YDL042C UGA4P32837 571 aa8.52□□□□□ -1.05
SIR2YDL042C INP51P40559 946 aaKnown RBP8.52□□□□□ -1.05
SIR2YDL042C PMT7Q06644 662 aa8.52□□□□□ -1.05
SIR2YDL042C MCD1Q12158 566 aa8.52□□□□□ -1.05
SIR2YDL042C GAR1P28007 205 aaKnown RBP8.51□□□□□ -1.05
SIR2YDL042C PRK1P40494 810 aa8.51□□□□□ -1.05
SIR2YDL042C LYS5P50113 272 aa8.51□□□□□ -1.05
SIR2YDL042C ULP1Q02724 621 aa8.51□□□□□ -1.05
SIR2YDL042C MCM5P29496 775 aaKnown RBP8.5□□□□□ -1.05
SIR2YDL042C SAP155P43612 1002 aa8.5□□□□□ -1.05
SIR2YDL042C ALD3P54114 506 aa8.5□□□□□ -1.05
SIR2YDL042C PRE9P23638 258 aaKnown RBP8.49□□□□□ -1.05
SIR2YDL042C RIM11P38615 370 aa8.49□□□□□ -1.05
SIR2YDL042C YPL109CQ02981 657 aa8.49□□□□□ -1.05
SIR2YDL042C NPR1P22211 790 aa8.49□□□□□ -1.05
SIR2YDL042C MAD1P40957 749 aa8.49□□□□□ -1.05
SIR2YDL042C MAG2Q06436 670 aaKnown RBP8.49□□□□□ -1.05
SIR2YDL042C CMR1Q12510 522 aaKnown RBP8.49□□□□□ -1.05
SIR2YDL042C MRP10O75012 95 aa8.48□□□□□ -1.05
SIR2YDL042C PET112P33893 541 aa8.48□□□□□ -1.05
SIR2YDL042C BIO5P53744 561 aaKnown RBP8.48□□□□□ -1.05
SIR2YDL042C YAF9P53930 226 aa8.48□□□□□ -1.05
SIR2YDL042C ADI1Q03677 179 aa8.48□□□□□ -1.05
SIR2YDL042C GLO4Q12320 285 aa8.48□□□□□ -1.05
SIR2YDL042C CLN2P20438 545 aa8.46□□□□□ -1.05
SIR2YDL042C PIN2Q12057 282 aa8.46□□□□□ -1.05
SIR2YDL042C YJR124CP47159 448 aa8.46□□□□□ -1.06
SIR2YDL042C PRP5P21372 849 aaPredicted RBP8.45□□□□□ -1.06
SIR2YDL042C MNR2P35724 969 aa8.45□□□□□ -1.06
SIR2YDL042C TFA2P36145 328 aa8.45□□□□□ -1.06
SIR2YDL042C RSM26P47141 266 aa8.45□□□□□ -1.06
SIR2YDL042C VPS16Q03308 798 aa8.45□□□□□ -1.06
SIR2YDL042C SQT1P35184 431 aa8.44□□□□□ -1.06
SIR2YDL042C SOG2Q08817 791 aa8.44□□□□□ -1.06
SIR2YDL042C HVG1P0CE11 249 aa8.43□□□□□ -1.06
SIR2YDL042C PIC2P40035 300 aa8.43□□□□□ -1.06
SIR2YDL042C YNR065CP53751 1116 aa8.43□□□□□ -1.06
SIR2YDL042C YDL176WQ12027 708 aa8.43□□□□□ -1.06
SIR2YDL042C AMN1P38285 549 aaPredicted RBP8.43□□□□□ -1.06
SIR2YDL042C GBP2P25555 427 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
SIR2YDL042C VAC8P39968 578 aa8.41□□□□□ -1.06
SIR2YDL042C LSB6P42951 607 aa8.41□□□□□ -1.06
SIR2YDL042C ALD6P54115 500 aaKnown RBP8.41□□□□□ -1.06
SIR2YDL042C PDC5P16467 563 aaKnown RBP8.4□□□□□ -1.06
SIR2YDL042C FET4P40988 552 aa8.4□□□□□ -1.06
SIR2YDL042C GUP1P53154 560 aa8.4□□□□□ -1.06
SIR2YDL042C PEX13P80667 386 aa8.4□□□□□ -1.06
SIR2YDL042C NOG1Q02892 647 aaKnown RBP8.4□□□□□ -1.06
SIR2YDL042C KNS1P32350 737 aaPredicted RBP8.4□□□□□ -1.07
SIR2YDL042C SHU2P38957 223 aa8.4□□□□□ -1.07
SIR2YDL042C GPM1P00950 247 aaKnown RBP8.39□□□□□ -1.07
SIR2YDL042C PEX28P38848 579 aa8.39□□□□□ -1.07
SIR2YDL042C CWC24P53769 259 aa8.39□□□□□ -1.07
SIR2YDL042C MSH3P25336 1018 aa8.38□□□□□ -1.07
SIR2YDL042C NEO1P40527 1151 aa8.38□□□□□ -1.07
SIR2YDL042C LEM3P42838 414 aa8.37□□□□□ -1.07
SIR2YDL042C SOK2P53438 785 aaPredicted RBP8.37□□□□□ -1.07
SIR2YDL042C GCR1P07261 785 aa8.37□□□□□ -1.07
SIR2YDL042C HTS1P07263 546 aaKnown RBP8.37□□□□□ -1.07
SIR2YDL042C JJJ3P47138 172 aa8.37□□□□□ -1.07
SIR2YDL042C ORC1P54784 914 aaPredicted RBP8.37□□□□□ -1.07
SIR2YDL042C CDC34P14682 295 aa8.36□□□□□ -1.07
SIR2YDL042C YKL077WP36081 392 aa8.36□□□□□ -1.07
SIR2YDL042C XKS1P42826 600 aa8.36□□□□□ -1.07
SIR2YDL042C YGL140CP53120 1219 aa8.36□□□□□ -1.07
SIR2YDL042C HAS1Q03532 505 aaKnown RBP8.36□□□□□ -1.07
SIR2YDL042C HPF1Q05164 967 aa8.36□□□□□ -1.07
SIR2YDL042C NNF1P47149 201 aa8.35□□□□□ -1.07
SIR2YDL042C MRL1Q06815 381 aa8.35□□□□□ -1.07
SIR2YDL042C DPH6Q12429 685 aa8.35□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms