RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	TY1B-DR3	Q99231	1755 aa		4.7	□□□□□ -1.66
YAL004W	YAL004W	ULS1	Q08562	1619 aa		4.69	□□□□□ -1.66
YAL004W	YAL004W	PDR12	Q02785	1511 aa		4.69	□□□□□ -1.66
YAL004W	YAL004W	TY3B-G	Q99315	1547 aa		4.69	□□□□□ -1.66
YAL004W	YAL004W	RGP1	P16664	663 aa		4.69	□□□□□ -1.66
YAL004W	YAL004W	PUP1	P25043	261 aa		4.69	□□□□□ -1.66
YAL004W	YAL004W	PPG1	P32838	368 aa		4.69	□□□□□ -1.66
YAL004W	YAL004W	TOM20	P35180	183 aa		4.69	□□□□□ -1.66
YAL004W	YAL004W	SIS2	P36024	562 aa		4.69	□□□□□ -1.66
YAL004W	YAL004W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
YAL004W	YAL004W	RNH70	P53331	553 aa		4.69	□□□□□ -1.66
YAL004W	YAL004W	BUD21	Q08492	214 aa	Predicted RBP	4.69	□□□□□ -1.66
YAL004W	YAL004W	SRB8	P25648	1427 aa		4.69	□□□□□ -1.66
YAL004W	YAL004W	FPR3	P38911	411 aa	Known RBP	4.68	□□□□□ -1.66
YAL004W	YAL004W	UBX5	Q06682	500 aa		4.68	□□□□□ -1.66
YAL004W	YAL004W	YBL113C	Q7M4S9	792 aa		4.68	□□□□□ -1.66
YAL004W	YAL004W	NHA1	Q99271	985 aa		4.68	□□□□□ -1.66
YAL004W	YAL004W	IRC20	Q06554	1556 aa		4.68	□□□□□ -1.66
YAL004W	YAL004W	MMS1	Q06211	1407 aa		4.67	□□□□□ -1.66
YAL004W	YAL004W	SWI5	P08153	709 aa		4.67	□□□□□ -1.66
YAL004W	YAL004W	PGM2	P37012	569 aa	Known RBP	4.67	□□□□□ -1.66
YAL004W	YAL004W	TPO2	P53283	614 aa		4.67	□□□□□ -1.66
YAL004W	YAL004W	YNL108C	P53929	270 aa		4.67	□□□□□ -1.66
YAL004W	YAL004W	YOL098C	Q12496	1037 aa		4.67	□□□□□ -1.66
YAL004W	YAL004W	TY2B-B	Q12491	1770 aa		4.67	□□□□□ -1.66
YAL004W	YAL004W	TY1B-BR	Q12193	1756 aa		4.66	□□□□□ -1.66
YAL004W	YAL004W	TY1B-GR3	Q12316	1755 aa		4.66	□□□□□ -1.66
YAL004W	YAL004W	TY1B-OR	Q92393	1755 aa		4.66	□□□□□ -1.66
YAL004W	YAL004W	AI3	P03877	415 aa		4.66	□□□□□ -1.66
YAL004W	YAL004W	TSR4	P25040	408 aa		4.66	□□□□□ -1.66
YAL004W	YAL004W	POL32	P47110	350 aa		4.66	□□□□□ -1.66
YAL004W	YAL004W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
YAL004W	YAL004W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
YAL004W	YAL004W	NUP157	P40064	1391 aa	Known RBP	4.65	□□□□□ -1.66
YAL004W	YAL004W	YSP2	Q06681	1438 aa		4.65	□□□□□ -1.66
YAL004W	YAL004W	MCM1	P11746	286 aa		4.65	□□□□□ -1.67
YAL004W	YAL004W	PRK1	P40494	810 aa		4.65	□□□□□ -1.67
YAL004W	YAL004W	MSC6	Q08818	692 aa	Known RBP	4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-H	O13535	1793 aa		4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-DR5	P0C2I2	1755 aa		4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-DR6	P0C2I3	1755 aa		4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-LR2	P0C2I5	1755 aa		4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-PR2	P0C2J0	1756 aa		4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-JR1	P47098	1755 aa		4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-ER1	Q03612	1755 aa		4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-ML1	Q04711	1755 aa	Known RBP	4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-GR2	Q12269	1755 aa		4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-OL	Q12273	1755 aa		4.65	□□□□□ -1.67
YAL004W	YAL004W	TY1B-PL	Q12414	1755 aa	Known RBP	4.65	□□□□□ -1.67
YAL004W	YAL004W	RPP1A	P05318	106 aa	Predicted RBP	4.64	□□□□□ -1.67
YAL004W	YAL004W	NAR1	P23503	491 aa	Known RBP	4.64	□□□□□ -1.67
YAL004W	YAL004W	ALG14	P38242	237 aa		4.64	□□□□□ -1.67
YAL004W	YAL004W	ATG3	P40344	310 aa		4.64	□□□□□ -1.67
YAL004W	YAL004W	JIP5	Q06214	492 aa	Predicted RBP	4.64	□□□□□ -1.67
YAL004W	YAL004W	RRP15	Q06511	250 aa	Predicted RBP	4.64	□□□□□ -1.67
YAL004W	YAL004W	PDR10	P51533	1564 aa		4.64	□□□□□ -1.67
YAL004W	YAL004W	ENO1	P00924	437 aa	Known RBP	4.63	□□□□□ -1.67
YAL004W	YAL004W	ATE1	P16639	503 aa		4.63	□□□□□ -1.67
YAL004W	YAL004W	MNN4	P36044	1178 aa		4.63	□□□□□ -1.67
YAL004W	YAL004W	ERP5	P38819	212 aa		4.63	□□□□□ -1.67
YAL004W	YAL004W	AVT1	P47082	602 aa		4.63	□□□□□ -1.67
YAL004W	YAL004W	GIS4	Q04233	774 aa		4.63	□□□□□ -1.67
YAL004W	YAL004W	GAS5	Q08193	484 aa		4.63	□□□□□ -1.67
YAL004W	YAL004W	IQG1	Q12280	1495 aa		4.62	□□□□□ -1.67
YAL004W	YAL004W	YKR073C	P36153	106 aa		4.62	□□□□□ -1.67
YAL004W	YAL004W	TGL4	P36165	910 aa		4.62	□□□□□ -1.67
YAL004W	YAL004W	YHL050C	P38721	697 aa		4.62	□□□□□ -1.67
YAL004W	YAL004W	YHR219W	P38900	624 aa		4.62	□□□□□ -1.67
YAL004W	YAL004W	HEH2	Q03281	663 aa		4.62	□□□□□ -1.67
YAL004W	YAL004W	OYE2	Q03558	400 aa	Known RBP	4.62	□□□□□ -1.67
YAL004W	YAL004W	GDB1	Q06625	1536 aa		4.62	□□□□□ -1.67
YAL004W	YAL004W	SUP45	P12385	437 aa	Known RBP	4.61	□□□□□ -1.67
YAL004W	YAL004W	RDS2	P19541	446 aa	Known RBP	4.61	□□□□□ -1.67
YAL004W	YAL004W	MLF3	P32047	452 aa		4.61	□□□□□ -1.67
YAL004W	YAL004W	SRP40	P32583	406 aa	Predicted RBP	4.61	□□□□□ -1.67
YAL004W	YAL004W	YKL091C	P33324	310 aa	Known RBP	4.61	□□□□□ -1.67
YAL004W	YAL004W	AIM9	P40053	627 aa	Known RBP	4.61	□□□□□ -1.67
YAL004W	YAL004W	THI12	P42883	340 aa		4.61	□□□□□ -1.67
YAL004W	YAL004W	THI5	P43534	340 aa		4.61	□□□□□ -1.67
YAL004W	YAL004W	YPP1	P46951	817 aa		4.61	□□□□□ -1.67
YAL004W	YAL004W	THI11	P47183	340 aa		4.61	□□□□□ -1.67
YAL004W	YAL004W	ARI1	P53111	347 aa	Known RBP	4.61	□□□□□ -1.67
YAL004W	YAL004W	THI13	Q07748	340 aa		4.61	□□□□□ -1.67
YAL004W	YAL004W	RPA190	P10964	1664 aa	Known RBP	4.61	□□□□□ -1.67
YAL004W	YAL004W	ENO2	P00925	437 aa	Known RBP	4.6	□□□□□ -1.67
YAL004W	YAL004W	TRP3	P00937	484 aa		4.6	□□□□□ -1.67
YAL004W	YAL004W	SSB1	P11484	613 aa	Known RBP	4.6	□□□□□ -1.67
YAL004W	YAL004W	SAC7	P17121	654 aa		4.6	□□□□□ -1.67
YAL004W	YAL004W	SEC8	P32855	1065 aa		4.6	□□□□□ -1.67
YAL004W	YAL004W	SSB2	P40150	613 aa	Known RBP	4.6	□□□□□ -1.67
YAL004W	YAL004W	ZDS1	P50111	915 aa	Known RBP	4.6	□□□□□ -1.67
YAL004W	YAL004W	SKP1	P52286	194 aa		4.6	□□□□□ -1.67
YAL004W	YAL004W	MAG2	Q06436	670 aa	Known RBP	4.6	□□□□□ -1.67
YAL004W	YAL004W	ESC1	Q03661	1658 aa	Known RBP	4.6	□□□□□ -1.67
YAL004W	YAL004W	LTE1	P07866	1435 aa		4.59	□□□□□ -1.67
YAL004W	YAL004W	RPS6A	P0CX37	236 aa	Known RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms