RNA–Protein interactions for RNA: ENST00000635786.1

CACNA1A-217, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,840 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-217ENST00000635786 AAMPQ13685 434 aa13.21□□□□□ -0.29
CACNA1A-217ENST00000635786 EFCAB5A4FU69 1503 aa13.21□□□□□ -0.29
CACNA1A-217ENST00000635786 RALBP1Q15311 655 aa13.21□□□□□ -0.29
CACNA1A-217ENST00000635786 NLGN1Q8N2Q7 840 aa13.21□□□□□ -0.29
CACNA1A-217ENST00000635786 ANKRD33BA6NCL7 494 aa13.21□□□□□ -0.3
CACNA1A-217ENST00000635786 FRAT1Q92837 279 aaPredicted RBP13.21□□□□□ -0.3
CACNA1A-217ENST00000635786 PMM1Q92871 262 aa13.21□□□□□ -0.3
CACNA1A-217ENST00000635786 SPACA7Q96KW9 195 aa13.21□□□□□ -0.3
CACNA1A-217ENST00000635786 CHMP7Q8WUX9 453 aaPredicted RBP13.2□□□□□ -0.3
CACNA1A-217ENST00000635786 SERPINB4P48594 390 aa13.2□□□□□ -0.3
CACNA1A-217ENST00000635786 KIF7Q2M1P5 1343 aa13.19□□□□□ -0.3
CACNA1A-217ENST00000635786 ERCC5P28715 1186 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-217ENST00000635786 RRP1P56182 461 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-217ENST00000635786 NPAS4Q8IUM7 802 aa13.19□□□□□ -0.3
CACNA1A-217ENST00000635786 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
CACNA1A-217ENST00000635786 PSME1Q06323 249 aa13.19□□□□□ -0.3
CACNA1A-217ENST00000635786 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
CACNA1A-217ENST00000635786 PHOX2BQ99453 314 aa13.19□□□□□ -0.3
CACNA1A-217ENST00000635786 C7P10643 843 aa13.18□□□□□ -0.3
CACNA1A-217ENST00000635786 PAX3P23760 479 aa13.18□□□□□ -0.3
CACNA1A-217ENST00000635786 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-217ENST00000635786 OS9Q13438 667 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-217ENST00000635786 PIF1Q9H611 641 aa13.18□□□□□ -0.3
CACNA1A-217ENST00000635786 PPFIA4O75335 1185 aa13.18□□□□□ -0.3
CACNA1A-217ENST00000635786 EFCAB3Q8N7B9 438 aa13.18□□□□□ -0.3
CACNA1A-217ENST00000635786 IQSEC3Q9UPP2 1182 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-217ENST00000635786 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
CACNA1A-217ENST00000635786 GCC2Q8IWJ2 1684 aa13.18□□□□□ -0.3
CACNA1A-217ENST00000635786 MAGI1Q96QZ7 1491 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-217ENST00000635786 FOXD4Q12950 439 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-217ENST00000635786 DHX29Q7Z478 1369 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-217ENST00000635786 NME8Q8N427 588 aa13.16□□□□□ -0.3
CACNA1A-217ENST00000635786 EGFLAMQ63HQ2 1017 aa13.16□□□□□ -0.3
CACNA1A-217ENST00000635786 MORC4Q8TE76 937 aa13.16□□□□□ -0.3
CACNA1A-217ENST00000635786 UCN2Q96RP3 112 aa13.16□□□□□ -0.3
CACNA1A-217ENST00000635786 TANGO6Q9C0B7 1094 aa13.16□□□□□ -0.3
CACNA1A-217ENST00000635786 MIA2Q96PC5 1412 aa13.15□□□□□ -0.3
CACNA1A-217ENST00000635786 hCG_2014768A0A024R1R8 64 aa13.15□□□□□ -0.3
CACNA1A-217ENST00000635786 CCDC144BQ3MJ40 725 aa13.15□□□□□ -0.3
CACNA1A-217ENST00000635786 TMA7Q9Y2S6 64 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-217ENST00000635786 SYNJ2O15056 1496 aa13.15□□□□□ -0.3
CACNA1A-217ENST00000635786 DENND4BO75064 1496 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-217ENST00000635786 MYOM3Q5VTT5 1437 aa13.15□□□□□ -0.3
CACNA1A-217ENST00000635786 MNX1P50219 401 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-217ENST00000635786 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
CACNA1A-217ENST00000635786 L3MBTL2Q969R5 705 aa13.15□□□□□ -0.3
CACNA1A-217ENST00000635786 IQGAP2Q13576 1575 aa13.15□□□□□ -0.31
CACNA1A-217ENST00000635786 SAMD9Q5K651 1589 aa13.15□□□□□ -0.31
CACNA1A-217ENST00000635786 MARSP56192 900 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-217ENST00000635786 PNISRQ8TF01 805 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-217ENST00000635786 STK32AQ8WU08 396 aa13.14□□□□□ -0.31
CACNA1A-217ENST00000635786 TFIP11Q9UBB9 837 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-217ENST00000635786 PNMA2Q9UL42 364 aa13.14□□□□□ -0.31
CACNA1A-217ENST00000635786 SSTR3P32745 418 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-217ENST00000635786 CCDC194A0A1B0GVG4 234 aa13.13□□□□□ -0.31
CACNA1A-217ENST00000635786 CAPN15O75808 1086 aa13.13□□□□□ -0.31
CACNA1A-217ENST00000635786 PDIA6Q15084 440 aa13.13□□□□□ -0.31
CACNA1A-217ENST00000635786 FAN1Q9Y2M0 1017 aa13.13□□□□□ -0.31
CACNA1A-217ENST00000635786 PTPROQ16827 1216 aa13.12□□□□□ -0.31
CACNA1A-217ENST00000635786 KIAA0586Q9BVV6 1533 aa13.12□□□□□ -0.31
CACNA1A-217ENST00000635786 LRPPRCP42704 1394 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-217ENST00000635786 MTUS2Q5JR59 1369 aa13.12□□□□□ -0.31
CACNA1A-217ENST00000635786 SPOCK3Q9BQ16 436 aa13.12□□□□□ -0.31
CACNA1A-217ENST00000635786 RCAN3Q9UKA8 241 aa13.12□□□□□ -0.31
CACNA1A-217ENST00000635786 G3BP2Q9UN86 482 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-217ENST00000635786 CREB3O43889 395 aa13.11□□□□□ -0.31
CACNA1A-217ENST00000635786 PDE3BQ13370 1112 aa13.11□□□□□ -0.31
CACNA1A-217ENST00000635786 WWC1Q8IX03 1113 aa13.11□□□□□ -0.31
CACNA1A-217ENST00000635786 CHPF2Q9P2E5 772 aa13.11□□□□□ -0.31
CACNA1A-217ENST00000635786 TCEAL1Q15170 157 aa13.11□□□□□ -0.31
CACNA1A-217ENST00000635786 CEP170Q5SW79 1584 aa13.11□□□□□ -0.31
CACNA1A-217ENST00000635786 RPRD2Q5VT52 1461 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-217ENST00000635786 TLDC2A0PJX2 215 aa13.1□□□□□ -0.31
CACNA1A-217ENST00000635786 CLK2P49760 499 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-217ENST00000635786 IGBP1P78318 339 aa13.1□□□□□ -0.31
CACNA1A-217ENST00000635786 KTN1Q86UP2 1357 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-217ENST00000635786 SUPT6HQ7KZ85 1726 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-217ENST00000635786 PDAP1Q13442 181 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-217ENST00000635786 HIC1Q14526 733 aa13.09□□□□□ -0.31
CACNA1A-217ENST00000635786 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-217ENST00000635786 TEX14Q8IWB6 1497 aa13.09□□□□□ -0.31
CACNA1A-217ENST00000635786 GTF2F1P35269 517 aaKnown RBP eCLIP13.09□□□□□ -0.31
CACNA1A-217ENST00000635786 SDE2Q6IQ49 451 aa13.09□□□□□ -0.31
CACNA1A-217ENST00000635786 BANK1Q8NDB2 785 aa13.09□□□□□ -0.31
CACNA1A-217ENST00000635786 U2SURPO15042 1029 aaKnown RBP13.08□□□□□ -0.31
CACNA1A-217ENST00000635786 TMEM164Q5U3C3 297 aa13.08□□□□□ -0.31
CACNA1A-217ENST00000635786 TMC1Q8TDI8 760 aa13.08□□□□□ -0.31
CACNA1A-217ENST00000635786 LIMD1Q9UGP4 676 aa13.08□□□□□ -0.31
CACNA1A-217ENST00000635786 ROCK2O75116 1388 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-217ENST00000635786 VAC14Q08AM6 782 aa13.08□□□□□ -0.32
CACNA1A-217ENST00000635786 MPHOSPH9Q99550 1183 aa13.08□□□□□ -0.32
CACNA1A-217ENST00000635786 UGGT2Q9NYU1 1516 aa13.08□□□□□ -0.32
CACNA1A-217ENST00000635786 BIN2Q9UBW5 565 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-217ENST00000635786 NBPF8Q3BBV2 869 aa13.07□□□□□ -0.32
CACNA1A-217ENST00000635786 SLAIN2Q9P270 581 aa13.07□□□□□ -0.32
CACNA1A-217ENST00000635786 BRD4O60885 1362 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-217ENST00000635786 TCOF1Q13428 1488 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-217ENST00000635786 NUP160Q12769 1436 aa13.07□□□□□ -0.32
CACNA1A-217ENST00000635786 TMUB1Q9BVT8 246 aa13.07□□□□□ -0.32
CACNA1A-217ENST00000635786 HDLBPQ00341 1268 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms