RNA–Protein interactions for RNA: ENST00000635786.1

CACNA1A-217, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,840 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-217ENST00000635786 CHIC1Q5VXU3 224 aa22.52■■□□□ 1.2
CACNA1A-217ENST00000635786 SLC24A1O60721 1099 aa21.55■■□□□ 1.04
CACNA1A-217ENST00000635786 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
CACNA1A-217ENST00000635786 EHMT2Q96KQ7 1210 aa21.13■□□□□ 0.97
CACNA1A-217ENST00000635786 PHF23Q9BUL5 403 aaPredicted RBP20.45■□□□□ 0.86
CACNA1A-217ENST00000635786 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
CACNA1A-217ENST00000635786 RTN4Q9NQC3 1192 aaKnown RBP19.99■□□□□ 0.79
CACNA1A-217ENST00000635786 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.73
CACNA1A-217ENST00000635786 KCNA4P22459 653 aa19.6■□□□□ 0.73
CACNA1A-217ENST00000635786 AMER1Q5JTC6 1135 aaPredicted RBP19.27■□□□□ 0.67
CACNA1A-217ENST00000635786 NISCHQ9Y2I1 1504 aa19.21■□□□□ 0.67
CACNA1A-217ENST00000635786 NCBP3Q53F19 620 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-217ENST00000635786 PRKCSHP14314 528 aaPredicted RBP19.04■□□□□ 0.64
CACNA1A-217ENST00000635786 DAXXQ9UER7 740 aaPredicted RBP18.96■□□□□ 0.63
CACNA1A-217ENST00000635786 SLC4A1APQ9BWU0 796 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-217ENST00000635786 ADRA2BP18089 450 aa18.53■□□□□ 0.56
CACNA1A-217ENST00000635786 TIMELESSQ9UNS1 1208 aa18.37■□□□□ 0.53
CACNA1A-217ENST00000635786 TAOK2Q9UL54 1235 aa18.26■□□□□ 0.51
CACNA1A-217ENST00000635786 ZBTB22O15209 634 aa18.23■□□□□ 0.51
CACNA1A-217ENST00000635786 TULP1O00294 542 aaPredicted RBP18.13■□□□□ 0.49
CACNA1A-217ENST00000635786 ARXQ96QS3 562 aa18.06■□□□□ 0.48
CACNA1A-217ENST00000635786 TPRNQ4KMQ1 711 aa18.04■□□□□ 0.48
CACNA1A-217ENST00000635786 BCANQ96GW7 911 aa17.96■□□□□ 0.47
CACNA1A-217ENST00000635786 PLCB2Q00722 1185 aa17.88■□□□□ 0.45
CACNA1A-217ENST00000635786 HAP1P54257 671 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-217ENST00000635786 FKBP8Q14318 412 aa17.61■□□□□ 0.41
CACNA1A-217ENST00000635786 NPM3O75607 178 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-217ENST00000635786 HOMEZQ8IX15 550 aa17.59■□□□□ 0.41
CACNA1A-217ENST00000635786 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
CACNA1A-217ENST00000635786 GTF3C3Q9Y5Q9 886 aa17.5■□□□□ 0.39
CACNA1A-217ENST00000635786 RANGAP1P46060 587 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-217ENST00000635786 PODXL2Q9NZ53 605 aa17.4■□□□□ 0.38
CACNA1A-217ENST00000635786 KLHL34Q8N239 644 aa17.38■□□□□ 0.37
CACNA1A-217ENST00000635786 APLP2Q06481 763 aa17.37■□□□□ 0.37
CACNA1A-217ENST00000635786 PPP4R3CPQ6ZMV5 832 aa17.29■□□□□ 0.36
CACNA1A-217ENST00000635786 KDM2AQ9Y2K7 1162 aa17.27■□□□□ 0.35
CACNA1A-217ENST00000635786 SENP3Q9H4L4 574 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-217ENST00000635786 FBLN2P98095 1184 aa17.2■□□□□ 0.34
CACNA1A-217ENST00000635786 VSIG10Q8N0Z9 540 aa17.15■□□□□ 0.34
CACNA1A-217ENST00000635786 TMEM132AQ24JP5 1023 aa17.11■□□□□ 0.33
CACNA1A-217ENST00000635786 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.32
CACNA1A-217ENST00000635786 C14orf37Q86TY3 774 aa17.01■□□□□ 0.31
CACNA1A-217ENST00000635786 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
CACNA1A-217ENST00000635786 PELP1Q8IZL8 1130 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-217ENST00000635786 ERICH6Q7L0X2 663 aa16.95■□□□□ 0.3
CACNA1A-217ENST00000635786 SUPT5HO00267 1087 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-217ENST00000635786 HRCP23327 699 aa16.89■□□□□ 0.29
CACNA1A-217ENST00000635786 NPM2Q86SE8 214 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-217ENST00000635786 TTBK1Q5TCY1 1321 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-217ENST00000635786 TRIM26Q12899 539 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-217ENST00000635786 UBTFP17480 764 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-217ENST00000635786 CCDC180Q9P1Z9 1646 aa16.6■□□□□ 0.25
CACNA1A-217ENST00000635786 CFAP44Q96MT7 982 aa16.55■□□□□ 0.24
CACNA1A-217ENST00000635786 PAXIP1Q6ZW49 1069 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-217ENST00000635786 MYT1Q01538 1121 aa16.53■□□□□ 0.24
CACNA1A-217ENST00000635786 TSHZ2Q9NRE2 1034 aa16.49■□□□□ 0.23
CACNA1A-217ENST00000635786 EIF5BO60841 1220 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-217ENST00000635786 NBR1Q14596 966 aa16.38■□□□□ 0.21
CACNA1A-217ENST00000635786 NPM1P06748 294 aaKnown RBP eCLIP16.37■□□□□ 0.21
CACNA1A-217ENST00000635786 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
CACNA1A-217ENST00000635786 LOC105371045A0A1W2PR82 267 aa16.34■□□□□ 0.21
CACNA1A-217ENST00000635786 PKD2Q13563 968 aa16.34■□□□□ 0.21
CACNA1A-217ENST00000635786 PCGF6Q9BYE7 350 aa16.32■□□□□ 0.2
CACNA1A-217ENST00000635786 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-217ENST00000635786 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-217ENST00000635786 FOXD1Q16676 465 aa16.22■□□□□ 0.19
CACNA1A-217ENST00000635786 MYO15BQ96JP2 1530 aa16.21■□□□□ 0.19
CACNA1A-217ENST00000635786 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
CACNA1A-217ENST00000635786 TRHP20396 242 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-217ENST00000635786 BBXQ8WY36 941 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-217ENST00000635786 SHROOM4Q9ULL8 1493 aa16.14■□□□□ 0.17
CACNA1A-217ENST00000635786 PLEKHG5O94827 1062 aa16.13■□□□□ 0.17
CACNA1A-217ENST00000635786 ZCCHC6Q5VYS8 1495 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-217ENST00000635786 IFNLR1Q8IU57 520 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-217ENST00000635786 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
CACNA1A-217ENST00000635786 ARID3AQ99856 593 aa16■□□□□ 0.15
CACNA1A-217ENST00000635786 ZEB1P37275 1124 aaPredicted RBP15.98■□□□□ 0.15
CACNA1A-217ENST00000635786 SPRYD3Q8NCJ5 442 aa15.97■□□□□ 0.15
CACNA1A-217ENST00000635786 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
CACNA1A-217ENST00000635786 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
CACNA1A-217ENST00000635786 VASPP50552 380 aaPredicted RBP15.93■□□□□ 0.14
CACNA1A-217ENST00000635786 IGSF3O75054 1194 aa15.86■□□□□ 0.13
CACNA1A-217ENST00000635786 BRPF1P55201 1214 aaPredicted RBP15.85■□□□□ 0.13
CACNA1A-217ENST00000635786 ABCC9O60706 1549 aa15.85■□□□□ 0.13
CACNA1A-217ENST00000635786 DNAJC5Q9H3Z4 198 aa15.83■□□□□ 0.12
CACNA1A-217ENST00000635786 ATXN8OSP0DMR3 200 aa15.82■□□□□ 0.12
CACNA1A-217ENST00000635786 PIAS4Q8N2W9 510 aaPredicted RBP15.76■□□□□ 0.11
CACNA1A-217ENST00000635786 NECTIN2Q92692 538 aa15.73■□□□□ 0.11
CACNA1A-217ENST00000635786 RGL2O15211 777 aa15.72■□□□□ 0.11
CACNA1A-217ENST00000635786 C1orf115Q9H7X2 142 aa15.71■□□□□ 0.11
CACNA1A-217ENST00000635786 ATF5Q9Y2D1 282 aaPredicted RBP15.71■□□□□ 0.1
CACNA1A-217ENST00000635786 CCDC9Q9Y3X0 531 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-217ENST00000635786 ECM2O94769 699 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-217ENST00000635786 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
CACNA1A-217ENST00000635786 ACIN1Q9UKV3 1341 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-217ENST00000635786 MYCNP04198 464 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-217ENST00000635786 CHMP4AQ9BY43 222 aa15.59■□□□□ 0.09
CACNA1A-217ENST00000635786 ARID3CA6NKF2 412 aa15.57■□□□□ 0.08
CACNA1A-217ENST00000635786 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
CACNA1A-217ENST00000635786 CHGAP10645 457 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms