RNA–Protein interactions for RNA: ENST00000629009.2

CCDC163-206, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,694 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-206ENST00000629009 ADGRF5Q8IZF2 1346 aa12.09□□□□□ -0.47
CCDC163-206ENST00000629009 COL16A1Q07092 1604 aaPredicted RBP12.09□□□□□ -0.47
CCDC163-206ENST00000629009 PDE4DQ08499 809 aa12.09□□□□□ -0.47
CCDC163-206ENST00000629009 GZF1Q9H116 711 aaPredicted RBP12.09□□□□□ -0.47
CCDC163-206ENST00000629009 NRXN1Q9ULB1 1477 aa12.09□□□□□ -0.47
CCDC163-206ENST00000629009 NWD1Q149M9 1564 aa12.08□□□□□ -0.48
CCDC163-206ENST00000629009 PIK3C2GO75747 1445 aa12.08□□□□□ -0.48
CCDC163-206ENST00000629009 NKTRP30414 1462 aaKnown RBP12.07□□□□□ -0.48
CCDC163-206ENST00000629009 DCAF11Q8TEB1 546 aa12.07□□□□□ -0.48
CCDC163-206ENST00000629009 CLUAP1Q96AJ1 413 aa12.07□□□□□ -0.48
CCDC163-206ENST00000629009 CHD2O14647 1828 aaKnown RBP12.07□□□□□ -0.48
CCDC163-206ENST00000629009 METP08581 1390 aa12.06□□□□□ -0.48
CCDC163-206ENST00000629009 SHPRHQ149N8 1683 aa12.05□□□□□ -0.48
CCDC163-206ENST00000629009 E9PSI1 815 aa12.05□□□□□ -0.48
CCDC163-206ENST00000629009 TRIM66O15016 1216 aa12.05□□□□□ -0.48
CCDC163-206ENST00000629009 C14orf93Q9H972 538 aaKnown RBP12.05□□□□□ -0.48
CCDC163-206ENST00000629009 LRP6O75581 1613 aa12.05□□□□□ -0.48
CCDC163-206ENST00000629009 AMOTL2Q9Y2J4 779 aa12.04□□□□□ -0.48
CCDC163-206ENST00000629009 LAMC1P11047 1609 aa12.04□□□□□ -0.48
CCDC163-206ENST00000629009 PRAG1Q86YV5 1406 aa12.03□□□□□ -0.48
CCDC163-206ENST00000629009 PTPRUQ92729 1446 aa12.03□□□□□ -0.48
CCDC163-206ENST00000629009 FAM117AQ9C073 453 aa12.03□□□□□ -0.48
CCDC163-206ENST00000629009 NCOA3Q9Y6Q9 1424 aa12.03□□□□□ -0.48
CCDC163-206ENST00000629009 TMEM94Q12767 1356 aa12.03□□□□□ -0.48
CCDC163-206ENST00000629009 NUBP1P53384 320 aa12.03□□□□□ -0.48
CCDC163-206ENST00000629009 PROSER2Q86WR7 435 aaPredicted RBP12.03□□□□□ -0.48
CCDC163-206ENST00000629009 L3MBTL2Q969R5 705 aa12.03□□□□□ -0.48
CCDC163-206ENST00000629009 XRN1Q8IZH2 1706 aaKnown RBP12.02□□□□□ -0.48
CCDC163-206ENST00000629009 CFAP70Q5T0N1 1121 aa12.01□□□□□ -0.49
CCDC163-206ENST00000629009 UPF1Q92900 1129 aaKnown RBP eCLIP12.01□□□□□ -0.49
CCDC163-206ENST00000629009 PTCH1Q13635 1447 aa12□□□□□ -0.49
CCDC163-206ENST00000629009 LRPPRCP42704 1394 aaKnown RBP12□□□□□ -0.49
CCDC163-206ENST00000629009 ONECUT3O60422 494 aaPredicted RBP12□□□□□ -0.49
CCDC163-206ENST00000629009 SSUH2Q9Y2M2 353 aa12□□□□□ -0.49
CCDC163-206ENST00000629009 TECPR2O15040 1411 aa11.99□□□□□ -0.49
CCDC163-206ENST00000629009 ABCC11Q96J66 1382 aa11.99□□□□□ -0.49
CCDC163-206ENST00000629009 JCADQ9P266 1359 aa11.99□□□□□ -0.49
CCDC163-206ENST00000629009 CCDC97Q96F63 343 aaPredicted RBP11.99□□□□□ -0.49
CCDC163-206ENST00000629009 ASXL1Q8IXJ9 1541 aa11.98□□□□□ -0.49
CCDC163-206ENST00000629009 TMEM132EQ6IEE7 984 aa11.98□□□□□ -0.49
CCDC163-206ENST00000629009 GPIHBP1Q8IV16 184 aa11.98□□□□□ -0.49
CCDC163-206ENST00000629009 SIRT1Q96EB6 747 aa11.98□□□□□ -0.49
CCDC163-206ENST00000629009 SERPINA10Q9UK55 444 aa11.98□□□□□ -0.49
CCDC163-206ENST00000629009 AHDC1Q5TGY3 1603 aaPredicted RBP11.98□□□□□ -0.49
CCDC163-206ENST00000629009 YTHDC2Q9H6S0 1430 aaKnown RBP11.98□□□□□ -0.49
CCDC163-206ENST00000629009 ADGRB1O14514 1584 aa11.97□□□□□ -0.49
CCDC163-206ENST00000629009 KIAA1210Q9ULL0 1709 aa11.97□□□□□ -0.49
CCDC163-206ENST00000629009 MSH6P52701 1360 aa11.97□□□□□ -0.49
CCDC163-206ENST00000629009 KNDC1Q76NI1 1749 aa11.96□□□□□ -0.49
CCDC163-206ENST00000629009 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.96□□□□□ -0.49
CCDC163-206ENST00000629009 CHRM1P11229 460 aaPredicted RBP11.96□□□□□ -0.5
CCDC163-206ENST00000629009 DDRGK1Q96HY6 314 aa11.96□□□□□ -0.5
CCDC163-206ENST00000629009 CHMP4AQ9BY43 222 aa11.96□□□□□ -0.5
CCDC163-206ENST00000629009 C19orf44Q9H6X5 657 aa11.96□□□□□ -0.5
CCDC163-206ENST00000629009 ROBO2Q9HCK4 1378 aa11.96□□□□□ -0.5
CCDC163-206ENST00000629009 CDK12Q9NYV4 1490 aaPredicted RBP11.96□□□□□ -0.5
CCDC163-206ENST00000629009 FBXW7Q969H0 707 aa11.95□□□□□ -0.5
CCDC163-206ENST00000629009 RBM33Q96EV2 1170 aaKnown RBP11.95□□□□□ -0.5
CCDC163-206ENST00000629009 STK26Q9P289 416 aa11.95□□□□□ -0.5
CCDC163-206ENST00000629009 DLC1Q96QB1 1528 aa11.95□□□□□ -0.5
CCDC163-206ENST00000629009 RETREG2Q8NC44 543 aa11.94□□□□□ -0.5
CCDC163-206ENST00000629009 DCCP43146 1447 aa11.94□□□□□ -0.5
CCDC163-206ENST00000629009 PLEKHG3A1L390 1219 aa11.94□□□□□ -0.5
CCDC163-206ENST00000629009 SPDYE2BA6NHP3 402 aa11.94□□□□□ -0.5
CCDC163-206ENST00000629009 SPDYE6P0CI01 402 aa11.94□□□□□ -0.5
CCDC163-206ENST00000629009 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
CCDC163-206ENST00000629009 USP35Q9P2H5 1018 aa11.94□□□□□ -0.5
CCDC163-206ENST00000629009 ADGRL3Q9HAR2 1447 aa11.93□□□□□ -0.5
CCDC163-206ENST00000629009 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
CCDC163-206ENST00000629009 SRCAPQ6ZRS2 3230 aa11.93□□□□□ -0.5
CCDC163-206ENST00000629009 NHSL1Q5SYE7 1610 aa11.92□□□□□ -0.5
CCDC163-206ENST00000629009 ATF3P18847 181 aa11.91□□□□□ -0.5
CCDC163-206ENST00000629009 RBM26Q5T8P6 1007 aaKnown RBP11.91□□□□□ -0.5
CCDC163-206ENST00000629009 SPINK5Q9NQ38 1064 aaPredicted RBP11.91□□□□□ -0.5
CCDC163-206ENST00000629009 SPATA31A6Q5VVP1 1343 aa11.91□□□□□ -0.5
CCDC163-206ENST00000629009 TRPM1Q7Z4N2 1603 aa11.91□□□□□ -0.5
CCDC163-206ENST00000629009 NBPF1Q3BBV0 1214 aa11.91□□□□□ -0.5
CCDC163-206ENST00000629009 NBPF8Q3BBV2 869 aa11.91□□□□□ -0.5
CCDC163-206ENST00000629009 WAPLQ7Z5K2 1190 aa11.91□□□□□ -0.5
CCDC163-206ENST00000629009 TRAK1Q9UPV9 953 aa11.91□□□□□ -0.5
CCDC163-206ENST00000629009 ZNF772Q68DY9 489 aaPredicted RBP11.9□□□□□ -0.5
CCDC163-206ENST00000629009 PRAM1Q96QH2 718 aa11.9□□□□□ -0.5
CCDC163-206ENST00000629009 SLAIN2Q9P270 581 aa11.9□□□□□ -0.5
CCDC163-206ENST00000629009 NALCNQ8IZF0 1738 aa11.89□□□□□ -0.51
CCDC163-206ENST00000629009 GPRASP1Q5JY77 1395 aa11.89□□□□□ -0.51
CCDC163-206ENST00000629009 POGKQ9P215 609 aa11.89□□□□□ -0.51
CCDC163-206ENST00000629009 ROCK2O75116 1388 aaKnown RBP11.89□□□□□ -0.51
CCDC163-206ENST00000629009 PLEKHH1Q9ULM0 1364 aa11.89□□□□□ -0.51
CCDC163-206ENST00000629009 RGS12O14924 1447 aa11.88□□□□□ -0.51
CCDC163-206ENST00000629009 IRF5Q13568 498 aa11.88□□□□□ -0.51
CCDC163-206ENST00000629009 RALGAPBQ86X10 1494 aa11.88□□□□□ -0.51
CCDC163-206ENST00000629009 CDC42BPGQ6DT37 1551 aa11.87□□□□□ -0.51
CCDC163-206ENST00000629009 ARHGEF28Q8N1W1 1705 aaKnown RBP11.87□□□□□ -0.51
CCDC163-206ENST00000629009 MST1RQ04912 1400 aa11.86□□□□□ -0.51
CCDC163-206ENST00000629009 MEX3CQ5U5Q3 659 aaKnown RBP11.85□□□□□ -0.51
CCDC163-206ENST00000629009 RXRBP28702 533 aa11.84□□□□□ -0.51
CCDC163-206ENST00000629009 CARD11Q9BXL7 1154 aa11.84□□□□□ -0.51
CCDC163-206ENST00000629009 EIF3AQ14152 1382 aaKnown RBP11.84□□□□□ -0.51
CCDC163-206ENST00000629009 ADGRB2O60241 1585 aa11.84□□□□□ -0.51
CCDC163-206ENST00000629009 CENPJQ9HC77 1338 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms