RNA–Protein interactions for RNA: ENST00000623316.1

ATRX-210, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 803 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-210ENST00000623316 ZFRQ96KR1 1074 aaKnown RBP9.8□□□□□ -0.84
ATRX-210ENST00000623316 ACTN4O43707 911 aaKnown RBP9.79□□□□□ -0.84
ATRX-210ENST00000623316 ATG7O95352 703 aa9.79□□□□□ -0.84
ATRX-210ENST00000623316 TBC1D9Q6ZT07 1266 aa9.79□□□□□ -0.84
ATRX-210ENST00000623316 ATP9BO43861 1147 aa9.78□□□□□ -0.84
ATRX-210ENST00000623316 NR1H3Q13133 447 aa9.78□□□□□ -0.84
ATRX-210ENST00000623316 LYPD8Q6UX82 237 aa9.78□□□□□ -0.84
ATRX-210ENST00000623316 LRCH3Q96II8 777 aa9.77□□□□□ -0.85
ATRX-210ENST00000623316 VRTNQ9H8Y1 702 aa9.77□□□□□ -0.85
ATRX-210ENST00000623316 FANCD2Q9BXW9 1451 aa9.77□□□□□ -0.85
ATRX-210ENST00000623316 PRR14Q9BWN1 585 aa9.76□□□□□ -0.85
ATRX-210ENST00000623316 KIF21AQ7Z4S6 1674 aa9.76□□□□□ -0.85
ATRX-210ENST00000623316 THOC2Q8NI27 1593 aaKnown RBP9.75□□□□□ -0.85
ATRX-210ENST00000623316 ZBBXA8MT70 800 aa9.75□□□□□ -0.85
ATRX-210ENST00000623316 BHMG1C9JSJ3 638 aaPredicted RBP9.75□□□□□ -0.85
ATRX-210ENST00000623316 FBXO45P0C2W1 286 aa9.75□□□□□ -0.85
ATRX-210ENST00000623316 FOXD4L5Q5VV16 416 aaPredicted RBP9.75□□□□□ -0.85
ATRX-210ENST00000623316 RNF19BQ6ZMZ0 732 aa9.75□□□□□ -0.85
ATRX-210ENST00000623316 MRPL50Q8N5N7 158 aaKnown RBP9.75□□□□□ -0.85
ATRX-210ENST00000623316 FOXD4L4Q8WXT5 416 aaPredicted RBP9.75□□□□□ -0.85
ATRX-210ENST00000623316 TMEM88BA6NKF7 163 aa9.74□□□□□ -0.85
ATRX-210ENST00000623316 USB1Q9BQ65 265 aaKnown RBP9.74□□□□□ -0.85
ATRX-210ENST00000623316 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.74□□□□□ -0.85
ATRX-210ENST00000623316 FKBPLQ9UIM3 349 aa9.74□□□□□ -0.85
ATRX-210ENST00000623316 IVNS1ABPQ9Y6Y0 642 aa9.74□□□□□ -0.85
ATRX-210ENST00000623316 BLOC1S3Q6QNY0 202 aa9.73□□□□□ -0.85
ATRX-210ENST00000623316 MRC2Q9UBG0 1479 aa9.72□□□□□ -0.85
ATRX-210ENST00000623316 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
ATRX-210ENST00000623316 ZNF687Q8N1G0 1237 aa9.72□□□□□ -0.85
ATRX-210ENST00000623316 PIK3CDO00329 1044 aa9.71□□□□□ -0.86
ATRX-210ENST00000623316 EMP3P54852 163 aa9.71□□□□□ -0.86
ATRX-210ENST00000623316 TK2O00142 265 aa9.7□□□□□ -0.86
ATRX-210ENST00000623316 B4GALNT3Q6L9W6 998 aa9.7□□□□□ -0.86
ATRX-210ENST00000623316 BRICD5Q6PL45 260 aa9.7□□□□□ -0.86
ATRX-210ENST00000623316 SALL2Q9Y467 1007 aaPredicted RBP9.7□□□□□ -0.86
ATRX-210ENST00000623316 WDR62O43379 1518 aa9.69□□□□□ -0.86
ATRX-210ENST00000623316 FMNL1O95466 1100 aaPredicted RBP9.69□□□□□ -0.86
ATRX-210ENST00000623316 F12P00748 615 aaPredicted RBP9.69□□□□□ -0.86
ATRX-210ENST00000623316 SKIP12755 728 aa9.69□□□□□ -0.86
ATRX-210ENST00000623316 RBM25P49756 843 aaKnown RBP9.69□□□□□ -0.86
ATRX-210ENST00000623316 URB2Q14146 1524 aaKnown RBP9.69□□□□□ -0.86
ATRX-210ENST00000623316 KANK4Q5T7N3 995 aaPredicted RBP9.69□□□□□ -0.86
ATRX-210ENST00000623316 NFATC2IPQ8NCF5 419 aa9.69□□□□□ -0.86
ATRX-210ENST00000623316 MAP10Q9P2G4 905 aa9.69□□□□□ -0.86
ATRX-210ENST00000623316 ZC3H4Q9UPT8 1303 aaKnown RBP9.69□□□□□ -0.86
ATRX-210ENST00000623316 USP17L3A6NCW0 530 aa9.68□□□□□ -0.86
ATRX-210ENST00000623316 USP17L4A6NCW7 530 aa9.68□□□□□ -0.86
ATRX-210ENST00000623316 JUNDP17535 347 aa9.68□□□□□ -0.86
ATRX-210ENST00000623316 CTHP32929 405 aa9.68□□□□□ -0.86
ATRX-210ENST00000623316 PPP4CP60510 307 aa9.68□□□□□ -0.86
ATRX-210ENST00000623316 ELOAQ14241 798 aaKnown RBP9.68□□□□□ -0.86
ATRX-210ENST00000623316 PTPRNQ16849 979 aa9.68□□□□□ -0.86
ATRX-210ENST00000623316 CCDC27Q2M243 656 aa9.68□□□□□ -0.86
ATRX-210ENST00000623316 USP17L2Q6R6M4 530 aa9.68□□□□□ -0.86
ATRX-210ENST00000623316 USP17L1Q7RTZ2 530 aa9.68□□□□□ -0.86
ATRX-210ENST00000623316 SCUBE3Q8IX30 993 aa9.68□□□□□ -0.86
ATRX-210ENST00000623316 OTUD5Q96G74 571 aa9.68□□□□□ -0.86
ATRX-210ENST00000623316 FAM205CA6NFA0 338 aa9.67□□□□□ -0.86
ATRX-210ENST00000623316 SND1Q7KZF4 910 aaKnown RBP eCLIP9.67□□□□□ -0.86
ATRX-210ENST00000623316 MARVELD3Q96A59 401 aa9.67□□□□□ -0.86
ATRX-210ENST00000623316 GOLGA8CPA6NN73 597 aa9.66□□□□□ -0.86
ATRX-210ENST00000623316 USP17L5A8MUK1 530 aa9.66□□□□□ -0.86
ATRX-210ENST00000623316 NR1I2O75469 434 aa9.66□□□□□ -0.86
ATRX-210ENST00000623316 ANKK1Q8NFD2 765 aa9.66□□□□□ -0.86
ATRX-210ENST00000623316 ZMIZ1Q9ULJ6 1067 aa9.66□□□□□ -0.86
ATRX-210ENST00000623316 NOVA2Q9UNW9 492 aaKnown RBP9.66□□□□□ -0.86
ATRX-210ENST00000623316 PCDHB3Q9Y5E6 796 aa9.66□□□□□ -0.86
ATRX-210ENST00000623316 ST18O60284 1047 aa9.65□□□□□ -0.86
ATRX-210ENST00000623316 TMEM164Q5U3C3 297 aa9.65□□□□□ -0.86
ATRX-210ENST00000623316 ADGRD1Q6QNK2 874 aa9.65□□□□□ -0.86
ATRX-210ENST00000623316 PLEKHM2Q8IWE5 1019 aa9.65□□□□□ -0.86
ATRX-210ENST00000623316 DEPDC4Q8N2C3 294 aa9.65□□□□□ -0.86
ATRX-210ENST00000623316 STAC3Q96MF2 364 aa9.65□□□□□ -0.86
ATRX-210ENST00000623316 HPS5Q9UPZ3 1129 aa9.65□□□□□ -0.86
ATRX-210ENST00000623316 APLP1P51693 650 aa9.64□□□□□ -0.87
ATRX-210ENST00000623316 SLFNL1Q499Z3 407 aa9.64□□□□□ -0.87
ATRX-210ENST00000623316 FAM174AQ8TBP5 190 aa9.64□□□□□ -0.87
ATRX-210ENST00000623316 STK32AQ8WU08 396 aa9.64□□□□□ -0.87
ATRX-210ENST00000623316 ZNF592Q92610 1267 aa9.64□□□□□ -0.87
ATRX-210ENST00000623316 ZNF428Q96B54 188 aa9.64□□□□□ -0.87
ATRX-210ENST00000623316 THAP11Q96EK4 314 aa9.64□□□□□ -0.87
ATRX-210ENST00000623316 PTK2Q05397 1052 aa9.63□□□□□ -0.87
ATRX-210ENST00000623316 ARMC2Q8NEN0 867 aa9.63□□□□□ -0.87
ATRX-210ENST00000623316 MKRN1Q9UHC7 482 aaKnown RBP9.63□□□□□ -0.87
ATRX-210ENST00000623316 PRDM2Q13029 1718 aa9.62□□□□□ -0.87
ATRX-210ENST00000623316 SOWAHBA6NEL2 793 aa9.62□□□□□ -0.87
ATRX-210ENST00000623316 LARP1Q6PKG0 1096 aaKnown RBP9.62□□□□□ -0.87
ATRX-210ENST00000623316 TSR3Q9UJK0 312 aaKnown RBP9.62□□□□□ -0.87
ATRX-210ENST00000623316 GNEQ9Y223 722 aaKnown RBP9.62□□□□□ -0.87
ATRX-210ENST00000623316 PCDHB9Q9Y5E1 797 aa9.62□□□□□ -0.87
ATRX-210ENST00000623316 TOPBP1Q92547 1522 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 FAM196BA6NMK8 535 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 USP17L15C9J2P7 530 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 USP17L10C9JJH3 530 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 USP17L13C9JLJ4 530 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 USP17L12C9JPN9 530 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 USP17L11C9JVI0 530 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 USP17L21D6R901 530 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 USP17L18D6R9N7 530 aa9.61□□□□□ -0.87
ATRX-210ENST00000623316 USP17L22D6RA61 530 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms