RNA–Protein interactions for RNA: ENST00000615288.4

RDM1-218, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-218ENST00000615288 SNX21Q969T3 373 aa12.57□□□□□ -0.4
RDM1-218ENST00000615288 TBC1D2Q9BYX2 928 aa12.57□□□□□ -0.4
RDM1-218ENST00000615288 ATP7BP35670 1465 aa12.57□□□□□ -0.4
RDM1-218ENST00000615288 CD109Q6YHK3 1445 aa12.56□□□□□ -0.4
RDM1-218ENST00000615288 YEATS2Q9ULM3 1422 aa12.56□□□□□ -0.4
RDM1-218ENST00000615288 TMEM131LA2VDJ0 1609 aa12.56□□□□□ -0.4
RDM1-218ENST00000615288 RLBP1P12271 317 aa12.56□□□□□ -0.4
RDM1-218ENST00000615288 RBM25P49756 843 aaKnown RBP12.56□□□□□ -0.4
RDM1-218ENST00000615288 KIF24Q5T7B8 1368 aa12.56□□□□□ -0.4
RDM1-218ENST00000615288 PTCH1Q13635 1447 aa12.55□□□□□ -0.4
RDM1-218ENST00000615288 PREX1Q8TCU6 1659 aa12.55□□□□□ -0.4
RDM1-218ENST00000615288 CALD1Q05682 793 aaKnown RBP12.55□□□□□ -0.4
RDM1-218ENST00000615288 A0A1W2PP64 1363 aa12.55□□□□□ -0.4
RDM1-218ENST00000615288 SEC24BO95487 1268 aa12.54□□□□□ -0.4
RDM1-218ENST00000615288 MCM4P33991 863 aa12.54□□□□□ -0.4
RDM1-218ENST00000615288 ATF7IPQ6VMQ6 1270 aa12.54□□□□□ -0.4
RDM1-218ENST00000615288 PLEKHF1Q96S99 279 aa12.54□□□□□ -0.4
RDM1-218ENST00000615288 C22orf23Q9BZE7 217 aa12.54□□□□□ -0.4
RDM1-218ENST00000615288 RICTORQ6R327 1708 aa12.54□□□□□ -0.4
RDM1-218ENST00000615288 LRRC7Q96NW7 1537 aa12.53□□□□□ -0.4
RDM1-218ENST00000615288 ARHGAP45Q92619 1136 aa12.53□□□□□ -0.4
RDM1-218ENST00000615288 SLC12A5Q9H2X9 1139 aa12.53□□□□□ -0.4
RDM1-218ENST00000615288 SLC52A1Q9NWF4 448 aa12.53□□□□□ -0.4
RDM1-218ENST00000615288 TERF2IPQ9NYB0 399 aa12.53□□□□□ -0.4
RDM1-218ENST00000615288 FAM135BQ49AJ0 1406 aa12.53□□□□□ -0.4
RDM1-218ENST00000615288 CD163L1Q9NR16 1453 aa12.53□□□□□ -0.4
RDM1-218ENST00000615288 GOLGA6L3A6NEY3 463 aa12.52□□□□□ -0.41
RDM1-218ENST00000615288 DDIT3P35638 169 aa12.52□□□□□ -0.41
RDM1-218ENST00000615288 TMPOP42166 694 aaKnown RBP12.52□□□□□ -0.41
RDM1-218ENST00000615288 MRE11P49959 708 aa12.52□□□□□ -0.41
RDM1-218ENST00000615288 HSCBQ8IWL3 235 aa12.52□□□□□ -0.41
RDM1-218ENST00000615288 SMC4Q9NTJ3 1288 aa12.52□□□□□ -0.41
RDM1-218ENST00000615288 POGKQ9P215 609 aa12.52□□□□□ -0.41
RDM1-218ENST00000615288 TRAK1Q9UPV9 953 aa12.52□□□□□ -0.41
RDM1-218ENST00000615288 U2AF1L5P0DN76 240 aaPredicted RBP12.51□□□□□ -0.41
RDM1-218ENST00000615288 TRIM27P14373 513 aa12.51□□□□□ -0.41
RDM1-218ENST00000615288 U2AF1Q01081 240 aaKnown RBP eCLIP12.51□□□□□ -0.41
RDM1-218ENST00000615288 NUCB1Q02818 461 aa12.51□□□□□ -0.41
RDM1-218ENST00000615288 SKOR2Q2VWA4 1001 aaPredicted RBP12.51□□□□□ -0.41
RDM1-218ENST00000615288 BMP2KLQ5H9B9 411 aa12.51□□□□□ -0.41
RDM1-218ENST00000615288 ANO8Q9HCE9 1232 aaPredicted RBP12.51□□□□□ -0.41
RDM1-218ENST00000615288 ZBTB40Q9NUA8 1239 aa12.51□□□□□ -0.41
RDM1-218ENST00000615288 IBTKQ9P2D0 1353 aaPredicted RBP12.51□□□□□ -0.41
RDM1-218ENST00000615288 CDK12Q9NYV4 1490 aaPredicted RBP12.51□□□□□ -0.41
RDM1-218ENST00000615288 ARHGEF40Q8TER5 1519 aa12.51□□□□□ -0.41
RDM1-218ENST00000615288 GCC1Q96CN9 775 aa12.5□□□□□ -0.41
RDM1-218ENST00000615288 FCHSD2O94868 740 aa12.49□□□□□ -0.41
RDM1-218ENST00000615288 NRKQ7Z2Y5 1582 aa12.48□□□□□ -0.41
RDM1-218ENST00000615288 YTHDC2Q9H6S0 1430 aaKnown RBP12.48□□□□□ -0.41
RDM1-218ENST00000615288 CLEC17AQ6ZS10 378 aa12.48□□□□□ -0.41
RDM1-218ENST00000615288 GBP4Q96PP9 640 aa12.48□□□□□ -0.41
RDM1-218ENST00000615288 ZNF692Q9BU19 519 aaPredicted RBP12.48□□□□□ -0.41
RDM1-218ENST00000615288 SLKQ9H2G2 1235 aaPredicted RBP12.48□□□□□ -0.41
RDM1-218ENST00000615288 RTN4Q9NQC3 1192 aaKnown RBP12.48□□□□□ -0.41
RDM1-218ENST00000615288 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
RDM1-218ENST00000615288 RRP7AQ9Y3A4 280 aaKnown RBP12.48□□□□□ -0.41
RDM1-218ENST00000615288 KNDC1Q76NI1 1749 aa12.48□□□□□ -0.41
RDM1-218ENST00000615288 CLCN1P35523 988 aa12.47□□□□□ -0.41
RDM1-218ENST00000615288 SSH1Q8WYL5 1049 aa12.47□□□□□ -0.41
RDM1-218ENST00000615288 ALKQ9UM73 1620 aa12.47□□□□□ -0.41
RDM1-218ENST00000615288 CPSF1Q10570 1443 aaKnown RBP12.46□□□□□ -0.41
RDM1-218ENST00000615288 SETD1AO15047 1707 aaKnown RBP12.46□□□□□ -0.41
RDM1-218ENST00000615288 PRKCSHP14314 528 aaPredicted RBP12.46□□□□□ -0.41
RDM1-218ENST00000615288 EXOSC9Q06265 439 aaKnown RBP12.46□□□□□ -0.41
RDM1-218ENST00000615288 AGLP35573 1532 aa12.46□□□□□ -0.42
RDM1-218ENST00000615288 AATKQ6ZMQ8 1374 aa12.45□□□□□ -0.42
RDM1-218ENST00000615288 TRAK2O60296 914 aa12.45□□□□□ -0.42
RDM1-218ENST00000615288 DIAPH1O60610 1272 aaKnown RBP12.45□□□□□ -0.42
RDM1-218ENST00000615288 HAP1P54257 671 aaPredicted RBP12.45□□□□□ -0.42
RDM1-218ENST00000615288 LMOD3Q0VAK6 560 aa12.45□□□□□ -0.42
RDM1-218ENST00000615288 HDGFL2Q7Z4V5 671 aaPredicted RBP12.45□□□□□ -0.42
RDM1-218ENST00000615288 ITPRIPQ8IWB1 547 aa12.45□□□□□ -0.42
RDM1-218ENST00000615288 RIMBP3CA6NJZ7 1639 aa12.44□□□□□ -0.42
RDM1-218ENST00000615288 RIMBP3BA6NNM3 1639 aa12.44□□□□□ -0.42
RDM1-218ENST00000615288 RIMBP3Q9UFD9 1639 aa12.44□□□□□ -0.42
RDM1-218ENST00000615288 NEUROD2Q15784 382 aa12.44□□□□□ -0.42
RDM1-218ENST00000615288 CHD1LQ86WJ1 897 aa12.44□□□□□ -0.42
RDM1-218ENST00000615288 UBE2Q2Q8WVN8 375 aa12.44□□□□□ -0.42
RDM1-218ENST00000615288 MON2Q7Z3U7 1717 aa12.44□□□□□ -0.42
RDM1-218ENST00000615288 EDC4Q6P2E9 1401 aaKnown RBP12.44□□□□□ -0.42
RDM1-218ENST00000615288 ABCC4O15439 1325 aa12.43□□□□□ -0.42
RDM1-218ENST00000615288 XRCC6P12956 609 aaKnown RBP eCLIP12.43□□□□□ -0.42
RDM1-218ENST00000615288 BCL2L13Q9BXK5 485 aa12.43□□□□□ -0.42
RDM1-218ENST00000615288 IFT57Q9NWB7 429 aa12.43□□□□□ -0.42
RDM1-218ENST00000615288 TNNQ9UQP3 1299 aa12.43□□□□□ -0.42
RDM1-218ENST00000615288 MYO5BQ9ULV0 1848 aa12.42□□□□□ -0.42
RDM1-218ENST00000615288 MFAP1P55081 439 aaKnown RBP12.42□□□□□ -0.42
RDM1-218ENST00000615288 RAB3GAP1Q15042 981 aa12.42□□□□□ -0.42
RDM1-218ENST00000615288 TMEM57Q8N5G2 664 aa12.42□□□□□ -0.42
RDM1-218ENST00000615288 NOB1Q9ULX3 412 aaKnown RBP12.42□□□□□ -0.42
RDM1-218ENST00000615288 PPP6R1Q9UPN7 881 aa12.42□□□□□ -0.42
RDM1-218ENST00000615288 SPATA31D1Q6ZQQ2 1576 aa12.42□□□□□ -0.42
RDM1-218ENST00000615288 FYB1O15117 783 aa12.41□□□□□ -0.42
RDM1-218ENST00000615288 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
RDM1-218ENST00000615288 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
RDM1-218ENST00000615288 TNNT2P45379 298 aaPredicted RBP12.41□□□□□ -0.42
RDM1-218ENST00000615288 GNAI1P63096 354 aa12.41□□□□□ -0.42
RDM1-218ENST00000615288 TSR2Q969E8 191 aaKnown RBP12.41□□□□□ -0.42
RDM1-218ENST00000615288 RIPK4P57078 832 aa12.4□□□□□ -0.42
RDM1-218ENST00000615288 NFE2L2Q16236 605 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms