RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 HNRNPUQ00839 825 aaKnown RBP eCLIP8.83□□□□□ -1
CDKAL1-204ENST00000613575 FAM43AQ8N2R8 423 aa8.83□□□□□ -1
CDKAL1-204ENST00000613575 PLA2R1Q13018 1463 aa8.82□□□□□ -1
CDKAL1-204ENST00000613575 CARD11Q9BXL7 1154 aa8.82□□□□□ -1
CDKAL1-204ENST00000613575 PREX2Q70Z35 1606 aa8.82□□□□□ -1
CDKAL1-204ENST00000613575 PTGER2P43116 358 aa8.81□□□□□ -1
CDKAL1-204ENST00000613575 DCAF11Q8TEB1 546 aa8.81□□□□□ -1
CDKAL1-204ENST00000613575 STAC3Q96MF2 364 aa8.81□□□□□ -1
CDKAL1-204ENST00000613575 USP35Q9P2H5 1018 aa8.81□□□□□ -1
CDKAL1-204ENST00000613575 GPRASP1Q5JY77 1395 aa8.81□□□□□ -1
CDKAL1-204ENST00000613575 FAM135AQ9P2D6 1515 aa8.81□□□□□ -1
CDKAL1-204ENST00000613575 NCLP19338 710 aaKnown RBP8.81□□□□□ -1
CDKAL1-204ENST00000613575 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
CDKAL1-204ENST00000613575 MRS2Q9HD23 443 aa8.81□□□□□ -1
CDKAL1-204ENST00000613575 CDC42BPBQ9Y5S2 1711 aa8.81□□□□□ -1
CDKAL1-204ENST00000613575 ZBED9Q6R2W3 1325 aa8.8□□□□□ -1
CDKAL1-204ENST00000613575 KTN1Q86UP2 1357 aaKnown RBP8.8□□□□□ -1
CDKAL1-204ENST00000613575 CLASP1Q7Z460 1538 aa8.8□□□□□ -1
CDKAL1-204ENST00000613575 RTEL1-TNFRSF6BF6WH68 1400 aa8.8□□□□□ -1
CDKAL1-204ENST00000613575 CALD1Q05682 793 aaKnown RBP8.8□□□□□ -1
CDKAL1-204ENST00000613575 LMOD2Q6P5Q4 547 aa8.8□□□□□ -1
CDKAL1-204ENST00000613575 LHX6Q9UPM6 363 aa8.8□□□□□ -1
CDKAL1-204ENST00000613575 ERBINQ96RT1 1412 aa8.79□□□□□ -1
CDKAL1-204ENST00000613575 ST20-MTHFSA0A0A6YYL1 179 aa8.79□□□□□ -1
CDKAL1-204ENST00000613575 CANXP27824 592 aaKnown RBP8.79□□□□□ -1
CDKAL1-204ENST00000613575 KDM5CP41229 1560 aa8.79□□□□□ -1
CDKAL1-204ENST00000613575 CNGB1Q14028 1251 aaPredicted RBP8.78□□□□□ -1
CDKAL1-204ENST00000613575 ZNF454Q8N9F8 522 aa8.78□□□□□ -1
CDKAL1-204ENST00000613575 CHD1O14646 1710 aa8.78□□□□□ -1
CDKAL1-204ENST00000613575 ARHGAP5Q13017 1502 aa8.78□□□□□ -1
CDKAL1-204ENST00000613575 ARAP3Q8WWN8 1544 aa8.78□□□□□ -1
CDKAL1-204ENST00000613575 DUOX2Q9NRD8 1548 aa8.78□□□□□ -1
CDKAL1-204ENST00000613575 CCDC144AA2RUR9 1427 aa8.78□□□□□ -1
CDKAL1-204ENST00000613575 PRAG1Q86YV5 1406 aa8.78□□□□□ -1
CDKAL1-204ENST00000613575 MAGI2Q86UL8 1455 aa8.78□□□□□ -1
CDKAL1-204ENST00000613575 PHF14O94880 888 aa8.78□□□□□ -1
CDKAL1-204ENST00000613575 RALBP1Q15311 655 aa8.78□□□□□ -1
CDKAL1-204ENST00000613575 RBM26Q5T8P6 1007 aaKnown RBP8.78□□□□□ -1
CDKAL1-204ENST00000613575 TEX2Q8IWB9 1127 aa8.78□□□□□ -1
CDKAL1-204ENST00000613575 PNISRQ8TF01 805 aaKnown RBP8.78□□□□□ -1
CDKAL1-204ENST00000613575 SYCP2Q9BX26 1530 aa8.78□□□□□ -1
CDKAL1-204ENST00000613575 PLXNC1O60486 1568 aa8.77□□□□□ -1
CDKAL1-204ENST00000613575 HSP90AA1P07900 732 aaKnown RBP8.77□□□□□ -1.01
CDKAL1-204ENST00000613575 RBM33Q96EV2 1170 aaKnown RBP8.77□□□□□ -1.01
CDKAL1-204ENST00000613575 EPAS1Q99814 870 aa8.77□□□□□ -1.01
CDKAL1-204ENST00000613575 UNC13BO14795 1591 aa8.77□□□□□ -1.01
CDKAL1-204ENST00000613575 TTC37Q6PGP7 1564 aa8.77□□□□□ -1.01
CDKAL1-204ENST00000613575 PER1O15534 1290 aaPredicted RBP8.76□□□□□ -1.01
CDKAL1-204ENST00000613575 OSBPP22059 807 aa8.76□□□□□ -1.01
CDKAL1-204ENST00000613575 FAM9BQ8IZU0 186 aa8.76□□□□□ -1.01
CDKAL1-204ENST00000613575 PCDHGA10Q9Y5H3 936 aa8.76□□□□□ -1.01
CDKAL1-204ENST00000613575 CENPJQ9HC77 1338 aaPredicted RBP8.76□□□□□ -1.01
CDKAL1-204ENST00000613575 POLR1AO95602 1720 aaPredicted RBP8.75□□□□□ -1.01
CDKAL1-204ENST00000613575 BCORL1Q5H9F3 1711 aa8.75□□□□□ -1.01
CDKAL1-204ENST00000613575 FOSBP53539 338 aa8.75□□□□□ -1.01
CDKAL1-204ENST00000613575 TYW1BQ6NUM6 668 aa8.75□□□□□ -1.01
CDKAL1-204ENST00000613575 ERBB3P21860 1342 aa8.75□□□□□ -1.01
CDKAL1-204ENST00000613575 TRAPPC8Q9Y2L5 1435 aa8.75□□□□□ -1.01
CDKAL1-204ENST00000613575 TPRNQ4KMQ1 711 aa8.75□□□□□ -1.01
CDKAL1-204ENST00000613575 FTSJ3Q8IY81 847 aaKnown RBP8.75□□□□□ -1.01
CDKAL1-204ENST00000613575 TESK2Q96S53 571 aa8.75□□□□□ -1.01
CDKAL1-204ENST00000613575 NUTM2FA1L443 756 aa8.74□□□□□ -1.01
CDKAL1-204ENST00000613575 PSDA5PKW4 1024 aaPredicted RBP8.74□□□□□ -1.01
CDKAL1-204ENST00000613575 NBPF1Q3BBV0 1214 aa8.74□□□□□ -1.01
CDKAL1-204ENST00000613575 PPP4R3BQ5MIZ7 849 aa8.74□□□□□ -1.01
CDKAL1-204ENST00000613575 ZDHHC16Q969W1 377 aa8.74□□□□□ -1.01
CDKAL1-204ENST00000613575 CHMP4BQ9H444 224 aaKnown RBP8.74□□□□□ -1.01
CDKAL1-204ENST00000613575 SPAG9O60271 1321 aaKnown RBP8.74□□□□□ -1.01
CDKAL1-204ENST00000613575 RNF123Q5XPI4 1314 aa8.74□□□□□ -1.01
CDKAL1-204ENST00000613575 PTPRTO14522 1441 aa8.74□□□□□ -1.01
CDKAL1-204ENST00000613575 IQGAP3Q86VI3 1631 aa8.74□□□□□ -1.01
CDKAL1-204ENST00000613575 A2MP01023 1474 aa8.73□□□□□ -1.01
CDKAL1-204ENST00000613575 BRD4O60885 1362 aaPredicted RBP8.73□□□□□ -1.01
CDKAL1-204ENST00000613575 LRPPRCP42704 1394 aaKnown RBP8.73□□□□□ -1.01
CDKAL1-204ENST00000613575 MAP3K7O43318 606 aa8.73□□□□□ -1.01
CDKAL1-204ENST00000613575 FBXW7Q969H0 707 aa8.73□□□□□ -1.01
CDKAL1-204ENST00000613575 ABCC1P33527 1531 aa8.73□□□□□ -1.01
CDKAL1-204ENST00000613575 SMG6Q86US8 1419 aaKnown RBP8.72□□□□□ -1.01
CDKAL1-204ENST00000613575 RGL3Q3MIN7 710 aa8.72□□□□□ -1.01
CDKAL1-204ENST00000613575 GPIHBP1Q8IV16 184 aa8.72□□□□□ -1.01
CDKAL1-204ENST00000613575 AFAP1Q8N556 730 aa8.72□□□□□ -1.01
CDKAL1-204ENST00000613575 PPP4R2Q9NY27 417 aa8.72□□□□□ -1.01
CDKAL1-204ENST00000613575 INSRP06213 1382 aa8.72□□□□□ -1.01
CDKAL1-204ENST00000613575 MYBBP1AQ9BQG0 1328 aaKnown RBP8.72□□□□□ -1.01
CDKAL1-204ENST00000613575 PPM1GO15355 546 aaPredicted RBP8.72□□□□□ -1.01
CDKAL1-204ENST00000613575 NEFMP07197 916 aa8.72□□□□□ -1.01
CDKAL1-204ENST00000613575 GTF2E1P29083 439 aaPredicted RBP8.72□□□□□ -1.01
CDKAL1-204ENST00000613575 PRIM1P49642 420 aaKnown RBP8.72□□□□□ -1.01
CDKAL1-204ENST00000613575 EN1Q05925 392 aaPredicted RBP8.72□□□□□ -1.01
CDKAL1-204ENST00000613575 PRDM4Q9UKN5 801 aa8.72□□□□□ -1.01
CDKAL1-204ENST00000613575 MYO5CQ9NQX4 1742 aa8.71□□□□□ -1.02
CDKAL1-204ENST00000613575 VARS2Q5ST30 1063 aaKnown RBP8.71□□□□□ -1.02
CDKAL1-204ENST00000613575 TMC1Q8TDI8 760 aa8.71□□□□□ -1.02
CDKAL1-204ENST00000613575 ZCCHC11Q5TAX3 1644 aaKnown RBP8.71□□□□□ -1.02
CDKAL1-204ENST00000613575 PARD3Q8TEW0 1356 aa8.7□□□□□ -1.02
CDKAL1-204ENST00000613575 WDR7Q9Y4E6 1490 aa8.7□□□□□ -1.02
CDKAL1-204ENST00000613575 LAMC1P11047 1609 aa8.7□□□□□ -1.02
CDKAL1-204ENST00000613575 NLRP13Q86W25 1043 aa8.69□□□□□ -1.02
CDKAL1-204ENST00000613575 ADAM33Q9BZ11 813 aa8.69□□□□□ -1.02
CDKAL1-204ENST00000613575 NUDCQ9Y266 331 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms