RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 DMTNQ08495 405 aa19.83■□□□□ 0.77
SYDE1-204ENST00000600440 HS1BP3Q53T59 392 aa19.83■□□□□ 0.77
SYDE1-204ENST00000600440 BBXQ8WY36 941 aaPredicted RBP19.83■□□□□ 0.77
SYDE1-204ENST00000600440 CCDC141Q6ZP82 1450 aa19.83■□□□□ 0.77
SYDE1-204ENST00000600440 PDLIM2Q96JY6 352 aa19.83■□□□□ 0.76
SYDE1-204ENST00000600440 ZSCAN20P17040 1043 aaPredicted RBP19.82■□□□□ 0.76
SYDE1-204ENST00000600440 NOL8Q76FK4 1167 aaKnown RBP19.82■□□□□ 0.76
SYDE1-204ENST00000600440 CDC42BPAQ5VT25 1732 aa19.82■□□□□ 0.76
SYDE1-204ENST00000600440 KIAA2012Q0VF49 1180 aa19.82■□□□□ 0.76
SYDE1-204ENST00000600440 BMP2KLQ5H9B9 411 aa19.82■□□□□ 0.76
SYDE1-204ENST00000600440 PPP4R3BQ5MIZ7 849 aa19.82■□□□□ 0.76
SYDE1-204ENST00000600440 ZBTB40Q9NUA8 1239 aa19.82■□□□□ 0.76
SYDE1-204ENST00000600440 ABCC10Q5T3U5 1492 aa19.81■□□□□ 0.76
SYDE1-204ENST00000600440 NUCB2P80303 420 aa19.81■□□□□ 0.76
SYDE1-204ENST00000600440 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.81■□□□□ 0.76
SYDE1-204ENST00000600440 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
SYDE1-204ENST00000600440 TARBP1Q13395 1621 aaKnown RBP19.8■□□□□ 0.76
SYDE1-204ENST00000600440 SHANK2Q9UPX8 1470 aa19.8■□□□□ 0.76
SYDE1-204ENST00000600440 MYO5CQ9NQX4 1742 aa19.79■□□□□ 0.76
SYDE1-204ENST00000600440 EIF2AK4Q9P2K8 1649 aaKnown RBP19.79■□□□□ 0.76
SYDE1-204ENST00000600440 ELL2O00472 640 aaPredicted RBP19.79■□□□□ 0.76
SYDE1-204ENST00000600440 SYNMO15061 1565 aa19.79■□□□□ 0.76
SYDE1-204ENST00000600440 PLXNC1O60486 1568 aa19.79■□□□□ 0.76
SYDE1-204ENST00000600440 POLR3AO14802 1390 aaPredicted RBP19.79■□□□□ 0.76
SYDE1-204ENST00000600440 SCAF11Q99590 1463 aaKnown RBP19.78■□□□□ 0.76
SYDE1-204ENST00000600440 BCL11BQ9C0K0 894 aaPredicted RBP19.78■□□□□ 0.76
SYDE1-204ENST00000600440 IBTKQ9P2D0 1353 aaPredicted RBP19.78■□□□□ 0.76
SYDE1-204ENST00000600440 NSD3Q9BZ95 1437 aa19.78■□□□□ 0.76
SYDE1-204ENST00000600440 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
SYDE1-204ENST00000600440 LRSAM1Q6UWE0 723 aa19.78■□□□□ 0.76
SYDE1-204ENST00000600440 NPC1L1Q9UHC9 1359 aa19.77■□□□□ 0.76
SYDE1-204ENST00000600440 NUP160Q12769 1436 aa19.77■□□□□ 0.76
SYDE1-204ENST00000600440 ATP2B3Q16720 1220 aa19.77■□□□□ 0.76
SYDE1-204ENST00000600440 TTC12Q9H892 705 aaPredicted RBP19.77■□□□□ 0.76
SYDE1-204ENST00000600440 PBRM1Q86U86 1689 aa19.76■□□□□ 0.75
SYDE1-204ENST00000600440 CDC45O75419 566 aa19.76■□□□□ 0.75
SYDE1-204ENST00000600440 CHGAP10645 457 aaKnown RBP19.76■□□□□ 0.75
SYDE1-204ENST00000600440 TRAK1Q9UPV9 953 aa19.76■□□□□ 0.75
SYDE1-204ENST00000600440 GDPD2Q9HCC8 539 aa19.75■□□□□ 0.75
SYDE1-204ENST00000600440 MAPK8IP2Q13387 824 aaPredicted RBP19.75■□□□□ 0.75
SYDE1-204ENST00000600440 ZNF710Q8N1W2 664 aa19.75■□□□□ 0.75
SYDE1-204ENST00000600440 MAGI1Q96QZ7 1491 aaPredicted RBP19.75■□□□□ 0.75
SYDE1-204ENST00000600440 IPO8O15397 1037 aaKnown RBP19.74■□□□□ 0.75
SYDE1-204ENST00000600440 MYRIPQ8NFW9 859 aa19.74■□□□□ 0.75
SYDE1-204ENST00000600440 PHF23Q9BUL5 403 aaPredicted RBP19.74■□□□□ 0.75
SYDE1-204ENST00000600440 RABEP1Q15276 862 aa19.73■□□□□ 0.75
SYDE1-204ENST00000600440 MCM5P33992 734 aa19.73■□□□□ 0.75
SYDE1-204ENST00000600440 USP25Q9UHP3 1055 aa19.73■□□□□ 0.75
SYDE1-204ENST00000600440 LAMC1P11047 1609 aa19.72■□□□□ 0.75
SYDE1-204ENST00000600440 PDE4CQ08493 712 aa19.72■□□□□ 0.75
SYDE1-204ENST00000600440 JPH4Q96JJ6 628 aa19.72■□□□□ 0.75
SYDE1-204ENST00000600440 TSPY26PQ9H489 355 aa19.71■□□□□ 0.75
SYDE1-204ENST00000600440 UTP14CQ5TAP6 766 aaKnown RBP19.71■□□□□ 0.75
SYDE1-204ENST00000600440 C16orf71Q8IYS4 520 aaPredicted RBP19.71■□□□□ 0.75
SYDE1-204ENST00000600440 CLEC17AQ6ZS10 378 aa19.7■□□□□ 0.74
SYDE1-204ENST00000600440 KIF3AQ9Y496 699 aa19.7■□□□□ 0.74
SYDE1-204ENST00000600440 VGLL3A8MV65 326 aa19.7■□□□□ 0.74
SYDE1-204ENST00000600440 ZDHHC9Q9Y397 364 aa19.7■□□□□ 0.74
SYDE1-204ENST00000600440 NOLC1Q14978 699 aaKnown RBP eCLIP19.7■□□□□ 0.74
SYDE1-204ENST00000600440 SYNJ2O15056 1496 aa19.69■□□□□ 0.74
SYDE1-204ENST00000600440 ST18O60284 1047 aa19.69■□□□□ 0.74
SYDE1-204ENST00000600440 GSPT1P15170 499 aaKnown RBP19.69■□□□□ 0.74
SYDE1-204ENST00000600440 U2AF2P26368 475 aaKnown RBP eCLIP19.69■□□□□ 0.74
SYDE1-204ENST00000600440 TMPOP42166 694 aaKnown RBP19.69■□□□□ 0.74
SYDE1-204ENST00000600440 CGNQ9P2M7 1197 aaKnown RBP19.69■□□□□ 0.74
SYDE1-204ENST00000600440 SAFB2Q14151 953 aaKnown RBP eCLIP19.69■□□□□ 0.74
SYDE1-204ENST00000600440 CCDC27Q2M243 656 aa19.68■□□□□ 0.74
SYDE1-204ENST00000600440 SCAPERQ9BY12 1400 aa19.68■□□□□ 0.74
SYDE1-204ENST00000600440 ZNF771Q7L3S4 317 aaPredicted RBP19.68■□□□□ 0.74
SYDE1-204ENST00000600440 PDCL2Q8N4E4 241 aa19.68■□□□□ 0.74
SYDE1-204ENST00000600440 ZBTB22O15209 634 aa19.67■□□□□ 0.74
SYDE1-204ENST00000600440 ADGRF5Q8IZF2 1346 aa19.67■□□□□ 0.74
SYDE1-204ENST00000600440 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
SYDE1-204ENST00000600440 ATAD2Q6PL18 1390 aa19.67■□□□□ 0.74
SYDE1-204ENST00000600440 BCL2L12Q9HB09 334 aa19.67■□□□□ 0.74
SYDE1-204ENST00000600440 OTUD7AQ8TE49 926 aaPredicted RBP19.66■□□□□ 0.74
SYDE1-204ENST00000600440 MYOM1P52179 1685 aa19.66■□□□□ 0.74
SYDE1-204ENST00000600440 CYP2E1P05181 493 aaPredicted RBP19.66■□□□□ 0.74
SYDE1-204ENST00000600440 GCC1Q96CN9 775 aa19.65■□□□□ 0.74
SYDE1-204ENST00000600440 THUMPD2Q9BTF0 503 aaKnown RBP19.65■□□□□ 0.74
SYDE1-204ENST00000600440 TRIM35Q9UPQ4 493 aa19.65■□□□□ 0.74
SYDE1-204ENST00000600440 ATP10BO94823 1461 aa19.65■□□□□ 0.74
SYDE1-204ENST00000600440 ERVK-7P63135 1459 aa19.65■□□□□ 0.74
SYDE1-204ENST00000600440 GTF2E1P29083 439 aaPredicted RBP19.65■□□□□ 0.74
SYDE1-204ENST00000600440 CHMP4BQ9H444 224 aaKnown RBP19.65■□□□□ 0.74
SYDE1-204ENST00000600440 PPIP5K1Q6PFW1 1433 aa19.64■□□□□ 0.74
SYDE1-204ENST00000600440 HMGN5P82970 282 aaKnown RBP19.64■□□□□ 0.73
SYDE1-204ENST00000600440 TMEM132EQ6IEE7 984 aa19.64■□□□□ 0.73
SYDE1-204ENST00000600440 KDM5AP29375 1690 aaKnown RBP19.64■□□□□ 0.73
SYDE1-204ENST00000600440 SYCP2Q9BX26 1530 aa19.64■□□□□ 0.73
SYDE1-204ENST00000600440 IQSEC2Q5JU85 1478 aa19.63■□□□□ 0.73
SYDE1-204ENST00000600440 NEK4P51957 841 aa19.63■□□□□ 0.73
SYDE1-204ENST00000600440 RSPH4AQ5TD94 716 aa19.63■□□□□ 0.73
SYDE1-204ENST00000600440 SIRT2Q8IXJ6 389 aa19.63■□□□□ 0.73
SYDE1-204ENST00000600440 USP26Q9BXU7 913 aa19.63■□□□□ 0.73
SYDE1-204ENST00000600440 GTPBP4Q9BZE4 634 aaKnown RBP19.63■□□□□ 0.73
SYDE1-204ENST00000600440 CARMIL2Q6F5E8 1435 aa19.63■□□□□ 0.73
SYDE1-204ENST00000600440 SMARCA5O60264 1052 aaPredicted RBP19.62■□□□□ 0.73
SYDE1-204ENST00000600440 GADD45BO75293 160 aaPredicted RBP19.62■□□□□ 0.73
SYDE1-204ENST00000600440 SPC24Q8NBT2 197 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms