RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 IFT172Q9UG01 1749 aa15.14■□□□□ 0.01
SMCO4P1-201ENST00000592909 SPATA31A1Q5TZJ5 1347 aa15.14■□□□□ 0.01
SMCO4P1-201ENST00000592909 ACIN1Q9UKV3 1341 aaKnown RBP15.14■□□□□ 0.01
SMCO4P1-201ENST00000592909 RGPD8O14715 1765 aaPredicted RBP15.13■□□□□ 0.01
SMCO4P1-201ENST00000592909 COL14A1Q05707 1796 aaKnown RBP15.13■□□□□ 0.01
SMCO4P1-201ENST00000592909 APBA3O96018 575 aa15.13■□□□□ 0.01
SMCO4P1-201ENST00000592909 PRDM11Q9NQV5 511 aa15.13■□□□□ 0.01
SMCO4P1-201ENST00000592909 THSD7AQ9UPZ6 1657 aa15.12■□□□□ 0.01
SMCO4P1-201ENST00000592909 DLC1Q96QB1 1528 aa15.12■□□□□ 0.01
SMCO4P1-201ENST00000592909 EIF3AQ14152 1382 aaKnown RBP15.11■□□□□ 0.01
SMCO4P1-201ENST00000592909 TRPM3Q9HCF6 1732 aaPredicted RBP15.1■□□□□ 0.01
SMCO4P1-201ENST00000592909 NBPF8Q3BBV2 869 aa15.1■□□□□ 0.01
SMCO4P1-201ENST00000592909 NBPF14Q5TI25 921 aa15.1■□□□□ 0.01
SMCO4P1-201ENST00000592909 PRR36Q9H6K5 1346 aa15.1■□□□□ 0.01
SMCO4P1-201ENST00000592909 TNS1Q9HBL0 1735 aaKnown RBP15.09■□□□□ 0.01
SMCO4P1-201ENST00000592909 NGDNQ8NEJ9 315 aaKnown RBP15.09■□□□□ 0.01
SMCO4P1-201ENST00000592909 ADGRB2O60241 1585 aa15.09■□□□□ 0.01
SMCO4P1-201ENST00000592909 ALS2Q96Q42 1657 aa15.09■□□□□ 0.01
SMCO4P1-201ENST00000592909 WASLO00401 505 aaPredicted RBP15.08■□□□□ 0
SMCO4P1-201ENST00000592909 BARGINQ6ZT62 677 aa15.08■□□□□ 0
SMCO4P1-201ENST00000592909 HIRIP3Q9BW71 556 aaPredicted RBP15.08■□□□□ 0
SMCO4P1-201ENST00000592909 KIAA0232Q92628 1395 aa15.08■□□□□ 0
SMCO4P1-201ENST00000592909 PAK3O75914 559 aaPredicted RBP15.07■□□□□ 0
SMCO4P1-201ENST00000592909 SPON1Q9HCB6 807 aa15.07■□□□□ 0
SMCO4P1-201ENST00000592909 PDE3BQ13370 1112 aa15.06■□□□□ 0
SMCO4P1-201ENST00000592909 CHRNA2Q15822 529 aa15.06■□□□□ 0
SMCO4P1-201ENST00000592909 STRN4Q9NRL3 753 aa15.06■□□□□ 0
SMCO4P1-201ENST00000592909 TRAK1Q9UPV9 953 aa15.06■□□□□ 0
SMCO4P1-201ENST00000592909 MINK1Q8N4C8 1332 aaPredicted RBP15.06■□□□□ 0
SMCO4P1-201ENST00000592909 DCAF8L1A6NGE4 600 aa15.05■□□□□ -0
SMCO4P1-201ENST00000592909 KCNQ2O43526 872 aa15.05■□□□□ -0
SMCO4P1-201ENST00000592909 TULP4Q9NRJ4 1543 aa15.05■□□□□ -0
SMCO4P1-201ENST00000592909 NINLQ9Y2I6 1382 aa15.04■□□□□ -0
SMCO4P1-201ENST00000592909 USP35Q9P2H5 1018 aa15.04■□□□□ -0
SMCO4P1-201ENST00000592909 PPP1R1BQ9UD71 204 aaPredicted RBP15.04■□□□□ -0
SMCO4P1-201ENST00000592909 EVA1CP58658 441 aa15.03■□□□□ -0
SMCO4P1-201ENST00000592909 ZC3H6P61129 1189 aaKnown RBP15.03■□□□□ -0
SMCO4P1-201ENST00000592909 ADGRB1O14514 1584 aa15.02■□□□□ -0
SMCO4P1-201ENST00000592909 TCP11L2Q8N4U5 519 aa15.02■□□□□ -0
SMCO4P1-201ENST00000592909 CRYBG1Q9Y4K1 1723 aa15.02□□□□□ -0.01
SMCO4P1-201ENST00000592909 SSH2Q76I76 1423 aa15.01□□□□□ -0.01
SMCO4P1-201ENST00000592909 C11orf95C9JLR9 678 aaPredicted RBP15.01□□□□□ -0.01
SMCO4P1-201ENST00000592909 LARP1Q6PKG0 1096 aaKnown RBP15.01□□□□□ -0.01
SMCO4P1-201ENST00000592909 THRAP3Q9Y2W1 955 aaKnown RBP15.01□□□□□ -0.01
SMCO4P1-201ENST00000592909 NUDT16Q96DE0 195 aaKnown RBP15□□□□□ -0.01
SMCO4P1-201ENST00000592909 RREB1Q92766 1687 aa15□□□□□ -0.01
SMCO4P1-201ENST00000592909 ATP7BP35670 1465 aa14.99□□□□□ -0.01
SMCO4P1-201ENST00000592909 NUP188Q5SRE5 1749 aa14.98□□□□□ -0.01
SMCO4P1-201ENST00000592909 NUTM2GQ5VZR2 741 aa14.98□□□□□ -0.01
SMCO4P1-201ENST00000592909 CPDO75976 1380 aa14.98□□□□□ -0.01
SMCO4P1-201ENST00000592909 PLSCR1O15162 318 aa14.97□□□□□ -0.01
SMCO4P1-201ENST00000592909 POLR3AO14802 1390 aaPredicted RBP14.97□□□□□ -0.01
SMCO4P1-201ENST00000592909 STAC3Q96MF2 364 aa14.96□□□□□ -0.01
SMCO4P1-201ENST00000592909 CAMTA1Q9Y6Y1 1673 aa14.96□□□□□ -0.01
SMCO4P1-201ENST00000592909 PLEKHG3A1L390 1219 aa14.95□□□□□ -0.02
SMCO4P1-201ENST00000592909 CCDC61Q9Y6R9 512 aa14.95□□□□□ -0.02
SMCO4P1-201ENST00000592909 USP19O94966 1318 aa14.94□□□□□ -0.02
SMCO4P1-201ENST00000592909 ACEP12821 1306 aa14.94□□□□□ -0.02
SMCO4P1-201ENST00000592909 ABTB2Q8N961 1025 aa14.94□□□□□ -0.02
SMCO4P1-201ENST00000592909 CDK19Q9BWU1 502 aa14.94□□□□□ -0.02
SMCO4P1-201ENST00000592909 PHRF1Q9P1Y6 1649 aaKnown RBP14.93□□□□□ -0.02
SMCO4P1-201ENST00000592909 ZNF784Q8NCA9 323 aaPredicted RBP14.93□□□□□ -0.02
SMCO4P1-201ENST00000592909 DCAF11Q8TEB1 546 aa14.93□□□□□ -0.02
SMCO4P1-201ENST00000592909 KDM2AQ9Y2K7 1162 aa14.93□□□□□ -0.02
SMCO4P1-201ENST00000592909 GCP02774 474 aa14.92□□□□□ -0.02
SMCO4P1-201ENST00000592909 ANO8Q9HCE9 1232 aaPredicted RBP14.92□□□□□ -0.02
SMCO4P1-201ENST00000592909 OVOS2A0A0G2JMS6 1433 aa14.92□□□□□ -0.02
SMCO4P1-201ENST00000592909 OVOS2A0A0J9YW53 1432 aa14.92□□□□□ -0.02
SMCO4P1-201ENST00000592909 OVOS2Q6IE36 1432 aa14.92□□□□□ -0.02
SMCO4P1-201ENST00000592909 NLRP13Q86W25 1043 aa14.91□□□□□ -0.02
SMCO4P1-201ENST00000592909 BCL11BQ9C0K0 894 aaPredicted RBP14.91□□□□□ -0.02
SMCO4P1-201ENST00000592909 LMO7Q8WWI1 1683 aa14.9□□□□□ -0.02
SMCO4P1-201ENST00000592909 COL5A2P05997 1499 aaPredicted RBP14.9□□□□□ -0.02
SMCO4P1-201ENST00000592909 PTGER2P43116 358 aa14.9□□□□□ -0.02
SMCO4P1-201ENST00000592909 PROM2Q8N271 834 aa14.9□□□□□ -0.02
SMCO4P1-201ENST00000592909 PDGFDQ9GZP0 370 aaPredicted RBP14.9□□□□□ -0.02
SMCO4P1-201ENST00000592909 NRKQ7Z2Y5 1582 aa14.9□□□□□ -0.02
SMCO4P1-201ENST00000592909 DDB1Q16531 1140 aa14.89□□□□□ -0.03
SMCO4P1-201ENST00000592909 CRB1P82279 1406 aa14.89□□□□□ -0.03
SMCO4P1-201ENST00000592909 ZBTB7AO95365 584 aa14.88□□□□□ -0.03
SMCO4P1-201ENST00000592909 PTF1AQ7RTS3 328 aa14.88□□□□□ -0.03
SMCO4P1-201ENST00000592909 ITSN1Q15811 1721 aa14.88□□□□□ -0.03
SMCO4P1-201ENST00000592909 PARP4Q9UKK3 1724 aaKnown RBP14.87□□□□□ -0.03
SMCO4P1-201ENST00000592909 BCL9O00512 1426 aa14.87□□□□□ -0.03
SMCO4P1-201ENST00000592909 SYT17Q9BSW7 474 aa14.86□□□□□ -0.03
SMCO4P1-201ENST00000592909 PEAK1Q9H792 1746 aa14.86□□□□□ -0.03
SMCO4P1-201ENST00000592909 BRD4O60885 1362 aaPredicted RBP14.85□□□□□ -0.03
SMCO4P1-201ENST00000592909 AATKQ6ZMQ8 1374 aa14.85□□□□□ -0.03
SMCO4P1-201ENST00000592909 RGPD3A6NKT7 1758 aaPredicted RBP14.85□□□□□ -0.03
SMCO4P1-201ENST00000592909 RGPD4Q7Z3J3 1758 aa14.85□□□□□ -0.03
SMCO4P1-201ENST00000592909 MARCH10Q8NA82 808 aaPredicted RBP14.85□□□□□ -0.03
SMCO4P1-201ENST00000592909 CDCA7Q9BWT1 371 aaPredicted RBP14.85□□□□□ -0.03
SMCO4P1-201ENST00000592909 STK32BQ9NY57 414 aa14.85□□□□□ -0.03
SMCO4P1-201ENST00000592909 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
SMCO4P1-201ENST00000592909 CASZ1Q86V15 1759 aa14.85□□□□□ -0.03
SMCO4P1-201ENST00000592909 C1QTNF8P60827 252 aa14.84□□□□□ -0.03
SMCO4P1-201ENST00000592909 SLC15A2Q16348 729 aa14.84□□□□□ -0.03
SMCO4P1-201ENST00000592909 TOM1L2Q6ZVM7 507 aa14.84□□□□□ -0.03
SMCO4P1-201ENST00000592909 FHDC1Q9C0D6 1143 aaPredicted RBP14.84□□□□□ -0.03
SMCO4P1-201ENST00000592909 SENP3-EIF4A1A0A087X0R7 540 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms