RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 NBPF8Q3BBV2 869 aa15.22■□□□□ 0.03
SDF2-209ENST00000591903 NBPF14Q5TI25 921 aa15.22■□□□□ 0.03
SDF2-209ENST00000591903 NINLQ9Y2I6 1382 aa15.22■□□□□ 0.03
SDF2-209ENST00000591903 TRIM37O94972 964 aa15.21■□□□□ 0.03
SDF2-209ENST00000591903 GPRASP1Q5JY77 1395 aa15.21■□□□□ 0.02
SDF2-209ENST00000591903 DHX57Q6P158 1386 aaKnown RBP15.21■□□□□ 0.02
SDF2-209ENST00000591903 APBA3O96018 575 aa15.2■□□□□ 0.02
SDF2-209ENST00000591903 RGL3Q3MIN7 710 aa15.2■□□□□ 0.02
SDF2-209ENST00000591903 PPP1R1BQ9UD71 204 aaPredicted RBP15.2■□□□□ 0.02
SDF2-209ENST00000591903 EIF3AQ14152 1382 aaKnown RBP15.2■□□□□ 0.02
SDF2-209ENST00000591903 PPARGC1BQ86YN6 1023 aaKnown RBP15.19■□□□□ 0.02
SDF2-209ENST00000591903 SPON1Q9HCB6 807 aa15.19■□□□□ 0.02
SDF2-209ENST00000591903 SPATA31A1Q5TZJ5 1347 aa15.18■□□□□ 0.02
SDF2-209ENST00000591903 DLC1Q96QB1 1528 aa15.18■□□□□ 0.02
SDF2-209ENST00000591903 PMFBP1Q8TBY8 1022 aa15.18■□□□□ 0.02
SDF2-209ENST00000591903 C14orf93Q9H972 538 aaKnown RBP15.17■□□□□ 0.02
SDF2-209ENST00000591903 PRDM11Q9NQV5 511 aa15.17■□□□□ 0.02
SDF2-209ENST00000591903 PRAM1Q96QH2 718 aa15.16■□□□□ 0.02
SDF2-209ENST00000591903 RGPD3A6NKT7 1758 aaPredicted RBP15.16■□□□□ 0.02
SDF2-209ENST00000591903 RGPD4Q7Z3J3 1758 aa15.16■□□□□ 0.02
SDF2-209ENST00000591903 ACIN1Q9UKV3 1341 aaKnown RBP15.16■□□□□ 0.02
SDF2-209ENST00000591903 ITSN1Q15811 1721 aa15.15■□□□□ 0.02
SDF2-209ENST00000591903 PHRF1Q9P1Y6 1649 aaKnown RBP15.15■□□□□ 0.02
SDF2-209ENST00000591903 KCNQ2O43526 872 aa15.15■□□□□ 0.02
SDF2-209ENST00000591903 TULP4Q9NRJ4 1543 aa15.14■□□□□ 0.01
SDF2-209ENST00000591903 PDE3BQ13370 1112 aa15.14■□□□□ 0.01
SDF2-209ENST00000591903 POGKQ9P215 609 aa15.14■□□□□ 0.01
SDF2-209ENST00000591903 C11orf95C9JLR9 678 aaPredicted RBP15.13■□□□□ 0.01
SDF2-209ENST00000591903 SAFB2Q14151 953 aaKnown RBP eCLIP15.13■□□□□ 0.01
SDF2-209ENST00000591903 BARGINQ6ZT62 677 aa15.13■□□□□ 0.01
SDF2-209ENST00000591903 CAMTA1Q9Y6Y1 1673 aa15.12■□□□□ 0.01
SDF2-209ENST00000591903 CHD4Q14839 1912 aa15.11■□□□□ 0.01
SDF2-209ENST00000591903 KIAA0232Q92628 1395 aa15.11■□□□□ 0.01
SDF2-209ENST00000591903 ATP7BP35670 1465 aa15.11■□□□□ 0.01
SDF2-209ENST00000591903 PARP4Q9UKK3 1724 aaKnown RBP15.1■□□□□ 0.01
SDF2-209ENST00000591903 PAK3O75914 559 aaPredicted RBP15.1■□□□□ 0.01
SDF2-209ENST00000591903 CFAP70Q5T0N1 1121 aa15.1■□□□□ 0.01
SDF2-209ENST00000591903 STRN4Q9NRL3 753 aa15.1■□□□□ 0.01
SDF2-209ENST00000591903 CASZ1Q86V15 1759 aa15.09■□□□□ 0.01
SDF2-209ENST00000591903 NGDNQ8NEJ9 315 aaKnown RBP15.09■□□□□ 0.01
SDF2-209ENST00000591903 SSH2Q76I76 1423 aa15.09■□□□□ 0.01
SDF2-209ENST00000591903 EVA1CP58658 441 aa15.08■□□□□ 0
SDF2-209ENST00000591903 SBF2Q86WG5 1849 aa15.08■□□□□ 0
SDF2-209ENST00000591903 CHRNA2Q15822 529 aa15.07■□□□□ 0
SDF2-209ENST00000591903 USP35Q9P2H5 1018 aa15.07■□□□□ 0
SDF2-209ENST00000591903 THRAP3Q9Y2W1 955 aaKnown RBP15.07■□□□□ 0
SDF2-209ENST00000591903 PRR36Q9H6K5 1346 aa15.07■□□□□ 0
SDF2-209ENST00000591903 NRKQ7Z2Y5 1582 aa15.07■□□□□ 0
SDF2-209ENST00000591903 TCP11L2Q8N4U5 519 aa15.06■□□□□ 0
SDF2-209ENST00000591903 ZNF784Q8NCA9 323 aaPredicted RBP15.06■□□□□ 0
SDF2-209ENST00000591903 MPHOSPH9Q99550 1183 aa15.06■□□□□ 0
SDF2-209ENST00000591903 ADGRB1O14514 1584 aa15.06■□□□□ 0
SDF2-209ENST00000591903 LMO7Q8WWI1 1683 aa15.06■□□□□ 0
SDF2-209ENST00000591903 WASLO00401 505 aaPredicted RBP15.05■□□□□ -0
SDF2-209ENST00000591903 TRIM26Q12899 539 aaPredicted RBP15.05■□□□□ -0
SDF2-209ENST00000591903 HIRIP3Q9BW71 556 aaPredicted RBP15.05■□□□□ -0
SDF2-209ENST00000591903 PEAK1Q9H792 1746 aa15.04■□□□□ -0
SDF2-209ENST00000591903 MYOM1P52179 1685 aa15.04■□□□□ -0
SDF2-209ENST00000591903 MINK1Q8N4C8 1332 aaPredicted RBP15.04■□□□□ -0
SDF2-209ENST00000591903 PLSCR1O15162 318 aa15.04■□□□□ -0
SDF2-209ENST00000591903 ZC3H6P61129 1189 aaKnown RBP15.04■□□□□ -0
SDF2-209ENST00000591903 OVOS2A0A0G2JMS6 1433 aa15.03■□□□□ -0
SDF2-209ENST00000591903 OVOS2A0A0J9YW53 1432 aa15.03■□□□□ -0
SDF2-209ENST00000591903 OVOS2Q6IE36 1432 aa15.03■□□□□ -0
SDF2-209ENST00000591903 SENP3-EIF4A1A0A087X0R7 540 aa15.03■□□□□ -0
SDF2-209ENST00000591903 CPDO75976 1380 aa15.02■□□□□ -0
SDF2-209ENST00000591903 TRAK1Q9UPV9 953 aa15.02■□□□□ -0
SDF2-209ENST00000591903 UTRNP46939 3433 aa15.01□□□□□ -0.01
SDF2-209ENST00000591903 IFFO2Q5TF58 517 aa15.01□□□□□ -0.01
SDF2-209ENST00000591903 LARP1Q6PKG0 1096 aaKnown RBP15.01□□□□□ -0.01
SDF2-209ENST00000591903 TOPAZ1Q8N9V7 1692 aa15□□□□□ -0.01
SDF2-209ENST00000591903 C1QTNF8P60827 252 aa15□□□□□ -0.01
SDF2-209ENST00000591903 ARHGEF28Q8N1W1 1705 aaKnown RBP15□□□□□ -0.01
SDF2-209ENST00000591903 LRRC37A3O60309 1634 aa14.99□□□□□ -0.01
SDF2-209ENST00000591903 AKAP12Q02952 1782 aa14.99□□□□□ -0.01
SDF2-209ENST00000591903 POLR3AO14802 1390 aaPredicted RBP14.98□□□□□ -0.01
SDF2-209ENST00000591903 COL5A2P05997 1499 aaPredicted RBP14.98□□□□□ -0.01
SDF2-209ENST00000591903 WNK3Q9BYP7 1800 aa14.98□□□□□ -0.01
SDF2-209ENST00000591903 CRB1P82279 1406 aa14.98□□□□□ -0.01
SDF2-209ENST00000591903 NUDT16Q96DE0 195 aaKnown RBP14.97□□□□□ -0.01
SDF2-209ENST00000591903 BCL11BQ9C0K0 894 aaPredicted RBP14.97□□□□□ -0.01
SDF2-209ENST00000591903 ANO8Q9HCE9 1232 aaPredicted RBP14.97□□□□□ -0.01
SDF2-209ENST00000591903 PTGER2P43116 358 aa14.96□□□□□ -0.01
SDF2-209ENST00000591903 NUTM2GQ5VZR2 741 aa14.96□□□□□ -0.01
SDF2-209ENST00000591903 USP19O94966 1318 aa14.95□□□□□ -0.02
SDF2-209ENST00000591903 BCL9O00512 1426 aa14.95□□□□□ -0.02
SDF2-209ENST00000591903 ZBTB7AO95365 584 aa14.95□□□□□ -0.02
SDF2-209ENST00000591903 ABTB2Q8N961 1025 aa14.95□□□□□ -0.02
SDF2-209ENST00000591903 SYT17Q9BSW7 474 aa14.95□□□□□ -0.02
SDF2-209ENST00000591903 DDB1Q16531 1140 aa14.94□□□□□ -0.02
SDF2-209ENST00000591903 STAC3Q96MF2 364 aa14.94□□□□□ -0.02
SDF2-209ENST00000591903 FHDC1Q9C0D6 1143 aaPredicted RBP14.94□□□□□ -0.02
SDF2-209ENST00000591903 ACEP12821 1306 aa14.93□□□□□ -0.02
SDF2-209ENST00000591903 NLRP13Q86W25 1043 aa14.93□□□□□ -0.02
SDF2-209ENST00000591903 STK32BQ9NY57 414 aa14.93□□□□□ -0.02
SDF2-209ENST00000591903 GCP02774 474 aa14.92□□□□□ -0.02
SDF2-209ENST00000591903 PDGFDQ9GZP0 370 aaPredicted RBP14.92□□□□□ -0.02
SDF2-209ENST00000591903 MTFR1LQ9H019 292 aa14.92□□□□□ -0.02
SDF2-209ENST00000591903 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
SDF2-209ENST00000591903 CCDC61Q9Y6R9 512 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms