RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 DIP2AQ14689 1571 aa12.4□□□□□ -0.42
PPP4R1-225ENST00000583438 POTEB2H3BUK9 544 aa12.4□□□□□ -0.42
PPP4R1-225ENST00000583438 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
PPP4R1-225ENST00000583438 KCNA6P17658 529 aa12.4□□□□□ -0.42
PPP4R1-225ENST00000583438 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.42
PPP4R1-225ENST00000583438 ARHGEF1Q92888 912 aaKnown RBP12.4□□□□□ -0.42
PPP4R1-225ENST00000583438 RPRD2Q5VT52 1461 aaKnown RBP12.4□□□□□ -0.43
PPP4R1-225ENST00000583438 XRN1Q8IZH2 1706 aaKnown RBP12.4□□□□□ -0.43
PPP4R1-225ENST00000583438 SHPRHQ149N8 1683 aa12.39□□□□□ -0.43
PPP4R1-225ENST00000583438 PLPP6Q8IY26 295 aa12.39□□□□□ -0.43
PPP4R1-225ENST00000583438 ANKRD50Q9ULJ7 1429 aa12.38□□□□□ -0.43
PPP4R1-225ENST00000583438 RIMS2Q9UQ26 1411 aa12.38□□□□□ -0.43
PPP4R1-225ENST00000583438 KANK1Q14678 1352 aa12.38□□□□□ -0.43
PPP4R1-225ENST00000583438 PTPRUQ92729 1446 aa12.37□□□□□ -0.43
PPP4R1-225ENST00000583438 EID1Q9Y6B2 187 aa12.37□□□□□ -0.43
PPP4R1-225ENST00000583438 PLEKHG1Q9ULL1 1385 aa12.37□□□□□ -0.43
PPP4R1-225ENST00000583438 SPHKAPQ2M3C7 1700 aa12.37□□□□□ -0.43
PPP4R1-225ENST00000583438 AHDC1Q5TGY3 1603 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-225ENST00000583438 EMILIN3Q9NT22 766 aa12.36□□□□□ -0.43
PPP4R1-225ENST00000583438 NALCNQ8IZF0 1738 aa12.35□□□□□ -0.43
PPP4R1-225ENST00000583438 PROSER2Q86WR7 435 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-225ENST00000583438 NHSL1Q5SYE7 1610 aa12.35□□□□□ -0.43
PPP4R1-225ENST00000583438 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
PPP4R1-225ENST00000583438 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-225ENST00000583438 ARIH1Q9Y4X5 557 aaPredicted RBP12.33□□□□□ -0.44
PPP4R1-225ENST00000583438 CLTCL1P53675 1640 aa12.33□□□□□ -0.44
PPP4R1-225ENST00000583438 MSH6P52701 1360 aa12.3□□□□□ -0.44
PPP4R1-225ENST00000583438 SETBP1Q9Y6X0 1596 aa12.3□□□□□ -0.44
PPP4R1-225ENST00000583438 FAM50AQ14320 339 aaKnown RBP12.3□□□□□ -0.44
PPP4R1-225ENST00000583438 SLC52A1Q9NWF4 448 aa12.3□□□□□ -0.44
PPP4R1-225ENST00000583438 SLAIN2Q9P270 581 aa12.3□□□□□ -0.44
PPP4R1-225ENST00000583438 TRPM2O94759 1503 aa12.3□□□□□ -0.44
PPP4R1-225ENST00000583438 NEXMIFQ5QGS0 1516 aa12.29□□□□□ -0.44
PPP4R1-225ENST00000583438 JCADQ9P266 1359 aa12.29□□□□□ -0.44
PPP4R1-225ENST00000583438 ASXL1Q8IXJ9 1541 aa12.28□□□□□ -0.44
PPP4R1-225ENST00000583438 DPYSL4O14531 572 aa12.28□□□□□ -0.44
PPP4R1-225ENST00000583438 SEMA3EO15041 775 aa12.28□□□□□ -0.44
PPP4R1-225ENST00000583438 TBX22Q9Y458 520 aa12.26□□□□□ -0.45
PPP4R1-225ENST00000583438 MST1RQ04912 1400 aa12.26□□□□□ -0.45
PPP4R1-225ENST00000583438 LAMC1P11047 1609 aa12.26□□□□□ -0.45
PPP4R1-225ENST00000583438 METP08581 1390 aa12.25□□□□□ -0.45
PPP4R1-225ENST00000583438 ROCK1Q13464 1354 aa12.25□□□□□ -0.45
PPP4R1-225ENST00000583438 NCOA3Q9Y6Q9 1424 aa12.25□□□□□ -0.45
PPP4R1-225ENST00000583438 KIF1BO60333 1816 aa12.24□□□□□ -0.45
PPP4R1-225ENST00000583438 UPF1Q92900 1129 aaKnown RBP eCLIP12.24□□□□□ -0.45
PPP4R1-225ENST00000583438 BRINP3Q76B58 766 aa12.23□□□□□ -0.45
PPP4R1-225ENST00000583438 DDX17Q92841 729 aaKnown RBP12.23□□□□□ -0.45
PPP4R1-225ENST00000583438 PPLO60437 1756 aa12.23□□□□□ -0.45
PPP4R1-225ENST00000583438 PIK3R4Q99570 1358 aa12.22□□□□□ -0.45
PPP4R1-225ENST00000583438 TESPA1A2RU30 521 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-225ENST00000583438 PPP1R15AO75807 674 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-225ENST00000583438 PRKCSHP14314 528 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-225ENST00000583438 OXER1Q8TDS5 423 aa12.22□□□□□ -0.45
PPP4R1-225ENST00000583438 NUP155O75694 1391 aa12.2□□□□□ -0.46
PPP4R1-225ENST00000583438 MAP3K9P80192 1104 aa12.2□□□□□ -0.46
PPP4R1-225ENST00000583438 PPARGC1BQ86YN6 1023 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-225ENST00000583438 AMOTL2Q9Y2J4 779 aa12.2□□□□□ -0.46
PPP4R1-225ENST00000583438 DCCP43146 1447 aa12.2□□□□□ -0.46
PPP4R1-225ENST00000583438 SETD5Q9C0A6 1442 aa12.2□□□□□ -0.46
PPP4R1-225ENST00000583438 PDIA6Q15084 440 aa12.19□□□□□ -0.46
PPP4R1-225ENST00000583438 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
PPP4R1-225ENST00000583438 MAMSTRQ6ZN01 415 aa12.19□□□□□ -0.46
PPP4R1-225ENST00000583438 SLAIN1Q8ND83 568 aa12.19□□□□□ -0.46
PPP4R1-225ENST00000583438 SCUBE2Q9NQ36 999 aa12.19□□□□□ -0.46
PPP4R1-225ENST00000583438 MARF1Q9Y4F3 1742 aaKnown RBP12.19□□□□□ -0.46
PPP4R1-225ENST00000583438 RGS12O14924 1447 aa12.19□□□□□ -0.46
PPP4R1-225ENST00000583438 ADGRL3Q9HAR2 1447 aa12.19□□□□□ -0.46
PPP4R1-225ENST00000583438 SPATA31A6Q5VVP1 1343 aa12.18□□□□□ -0.46
PPP4R1-225ENST00000583438 IFT172Q9UG01 1749 aa12.18□□□□□ -0.46
PPP4R1-225ENST00000583438 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.18□□□□□ -0.46
PPP4R1-225ENST00000583438 TRIM52Q96A61 297 aa12.18□□□□□ -0.46
PPP4R1-225ENST00000583438 C19orf44Q9H6X5 657 aa12.18□□□□□ -0.46
PPP4R1-225ENST00000583438 SPDYE16A6NNV3 312 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-225ENST00000583438 SLC34A2O95436 690 aa12.17□□□□□ -0.46
PPP4R1-225ENST00000583438 PTCD2Q8WV60 388 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-225ENST00000583438 PNPLA6Q8IY17 1366 aa12.17□□□□□ -0.46
PPP4R1-225ENST00000583438 COL22A1Q8NFW1 1626 aaPredicted RBP12.16□□□□□ -0.46
PPP4R1-225ENST00000583438 ITGAEP38570 1179 aa12.16□□□□□ -0.46
PPP4R1-225ENST00000583438 MLLT3P42568 568 aaPredicted RBP12.16□□□□□ -0.46
PPP4R1-225ENST00000583438 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.16□□□□□ -0.46
PPP4R1-225ENST00000583438 CDK12Q9NYV4 1490 aaPredicted RBP12.15□□□□□ -0.46
PPP4R1-225ENST00000583438 NAIPQ13075 1403 aa12.15□□□□□ -0.46
PPP4R1-225ENST00000583438 C14orf37Q86TY3 774 aa12.15□□□□□ -0.46
PPP4R1-225ENST00000583438 EP400Q96L91 3159 aa12.15□□□□□ -0.46
PPP4R1-225ENST00000583438 NUTM2BA6NNL0 878 aaPredicted RBP12.14□□□□□ -0.47
PPP4R1-225ENST00000583438 NUTM2EB1AL46 878 aaPredicted RBP12.14□□□□□ -0.47
PPP4R1-225ENST00000583438 LMOD2Q6P5Q4 547 aa12.14□□□□□ -0.47
PPP4R1-225ENST00000583438 NUTM2AQ8IVF1 878 aaPredicted RBP12.14□□□□□ -0.47
PPP4R1-225ENST00000583438 RGPD8O14715 1765 aaPredicted RBP12.14□□□□□ -0.47
PPP4R1-225ENST00000583438 ROBO2Q9HCK4 1378 aa12.14□□□□□ -0.47
PPP4R1-225ENST00000583438 C1orf167Q5SNV9 1468 aa12.14□□□□□ -0.47
PPP4R1-225ENST00000583438 AFF2P51816 1311 aa12.13□□□□□ -0.47
PPP4R1-225ENST00000583438 ATF3P18847 181 aa12.13□□□□□ -0.47
PPP4R1-225ENST00000583438 PRAG1Q86YV5 1406 aa12.12□□□□□ -0.47
PPP4R1-225ENST00000583438 PTCH1Q13635 1447 aa12.11□□□□□ -0.47
PPP4R1-225ENST00000583438 RRBP1Q9P2E9 1410 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-225ENST00000583438 SRCAPQ6ZRS2 3230 aa12.11□□□□□ -0.47
PPP4R1-225ENST00000583438 HOXB3P14651 431 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-225ENST00000583438 MEX3CQ5U5Q3 659 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-225ENST00000583438 OTUD5Q96G74 571 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms