RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 MYOM1P52179 1685 aa21.69■■□□□ 1.06
CSNK1D-213ENST00000580446 GIGYF1O75420 1035 aaPredicted RBP21.68■■□□□ 1.06
CSNK1D-213ENST00000580446 SPATA31A1Q5TZJ5 1347 aa21.68■■□□□ 1.06
CSNK1D-213ENST00000580446 COL14A1Q05707 1796 aaKnown RBP21.67■■□□□ 1.06
CSNK1D-213ENST00000580446 FHDC1Q9C0D6 1143 aaPredicted RBP21.67■■□□□ 1.06
CSNK1D-213ENST00000580446 CHRNA2Q15822 529 aa21.66■■□□□ 1.06
CSNK1D-213ENST00000580446 NRXN1Q9ULB1 1477 aa21.65■■□□□ 1.06
CSNK1D-213ENST00000580446 TECPR2O15040 1411 aa21.65■■□□□ 1.06
CSNK1D-213ENST00000580446 PTGER2P43116 358 aa21.65■■□□□ 1.06
CSNK1D-213ENST00000580446 PRDM11Q9NQV5 511 aa21.65■■□□□ 1.06
CSNK1D-213ENST00000580446 ROCK1Q13464 1354 aa21.64■■□□□ 1.06
CSNK1D-213ENST00000580446 ADGRF5Q8IZF2 1346 aa21.64■■□□□ 1.05
CSNK1D-213ENST00000580446 PDE3BQ13370 1112 aa21.63■■□□□ 1.05
CSNK1D-213ENST00000580446 SYT17Q9BSW7 474 aa21.63■■□□□ 1.05
CSNK1D-213ENST00000580446 RGPD8O14715 1765 aaPredicted RBP21.63■■□□□ 1.05
CSNK1D-213ENST00000580446 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
CSNK1D-213ENST00000580446 KIF1BO60333 1816 aa21.62■■□□□ 1.05
CSNK1D-213ENST00000580446 SAFB2Q14151 953 aaKnown RBP eCLIP21.62■■□□□ 1.051e-12■■■■■ 37.9
CSNK1D-213ENST00000580446 CASZ1Q86V15 1759 aa21.59■■□□□ 1.05
CSNK1D-213ENST00000580446 PTF1AQ7RTS3 328 aa21.58■■□□□ 1.05
CSNK1D-213ENST00000580446 RPGRIP1LQ68CZ1 1315 aa21.57■■□□□ 1.04
CSNK1D-213ENST00000580446 KIAA0232Q92628 1395 aa21.57■■□□□ 1.04
CSNK1D-213ENST00000580446 ABCC11Q96J66 1382 aa21.56■■□□□ 1.04
CSNK1D-213ENST00000580446 PPLO60437 1756 aa21.56■■□□□ 1.04
CSNK1D-213ENST00000580446 IFT172Q9UG01 1749 aa21.55■■□□□ 1.04
CSNK1D-213ENST00000580446 BCL11BQ9C0K0 894 aaPredicted RBP21.55■■□□□ 1.04
CSNK1D-213ENST00000580446 TRPM3Q9HCF6 1732 aaPredicted RBP21.53■■□□□ 1.04
CSNK1D-213ENST00000580446 PAK3O75914 559 aaPredicted RBP21.52■■□□□ 1.04
CSNK1D-213ENST00000580446 ZC3H6P61129 1189 aaKnown RBP21.52■■□□□ 1.04
CSNK1D-213ENST00000580446 YTHDC2Q9H6S0 1430 aaKnown RBP21.52■■□□□ 1.04
CSNK1D-213ENST00000580446 LARP1Q6PKG0 1096 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-213ENST00000580446 RGL3Q3MIN7 710 aa21.5■■□□□ 1.03
CSNK1D-213ENST00000580446 ALS2Q96Q42 1657 aa21.5■■□□□ 1.03
CSNK1D-213ENST00000580446 GPR162Q16538 588 aa21.49■■□□□ 1.03
CSNK1D-213ENST00000580446 NUTM2GQ5VZR2 741 aa21.49■■□□□ 1.03
CSNK1D-213ENST00000580446 PELP1Q8IZL8 1130 aaKnown RBP21.49■■□□□ 1.03
CSNK1D-213ENST00000580446 EVA1CP58658 441 aa21.48■■□□□ 1.03
CSNK1D-213ENST00000580446 BARGINQ6ZT62 677 aa21.48■■□□□ 1.03
CSNK1D-213ENST00000580446 PROM2Q8N271 834 aa21.48■■□□□ 1.03
CSNK1D-213ENST00000580446 KNDC1Q76NI1 1749 aa21.48■■□□□ 1.03
CSNK1D-213ENST00000580446 ACIN1Q9UKV3 1341 aaKnown RBP21.48■■□□□ 1.03
CSNK1D-213ENST00000580446 SSH2Q76I76 1423 aa21.47■■□□□ 1.03
CSNK1D-213ENST00000580446 CHD4Q14839 1912 aa21.47■■□□□ 1.03
CSNK1D-213ENST00000580446 DLC1Q96QB1 1528 aa21.47■■□□□ 1.03
CSNK1D-213ENST00000580446 GPRASP1Q5JY77 1395 aa21.47■■□□□ 1.03
CSNK1D-213ENST00000580446 CRYBG1Q9Y4K1 1723 aa21.46■■□□□ 1.03
CSNK1D-213ENST00000580446 PRAM1Q96QH2 718 aa21.46■■□□□ 1.03
CSNK1D-213ENST00000580446 HIRIP3Q9BW71 556 aaPredicted RBP21.46■■□□□ 1.03
CSNK1D-213ENST00000580446 KLHL34Q8N239 644 aa21.45■■□□□ 1.02
CSNK1D-213ENST00000580446 SGIP1Q9BQI5 828 aa21.45■■□□□ 1.02
CSNK1D-213ENST00000580446 TCP11L2Q8N4U5 519 aa21.44■■□□□ 1.02
CSNK1D-213ENST00000580446 PRR36Q9H6K5 1346 aa21.44■■□□□ 1.02
CSNK1D-213ENST00000580446 SHANK3Q9BYB0 1731 aa21.43■■□□□ 1.02
CSNK1D-213ENST00000580446 ARXQ96QS3 562 aa21.42■■□□□ 1.02
CSNK1D-213ENST00000580446 STK32BQ9NY57 414 aa21.42■■□□□ 1.02
CSNK1D-213ENST00000580446 PLSCR1O15162 318 aa21.41■■□□□ 1.02
CSNK1D-213ENST00000580446 CAPN15O75808 1086 aa21.41■■□□□ 1.02
CSNK1D-213ENST00000580446 ANKARQ7Z5J8 1434 aa21.4■■□□□ 1.02
CSNK1D-213ENST00000580446 MTFR1LQ9H019 292 aa21.4■■□□□ 1.02
CSNK1D-213ENST00000580446 NGDNQ8NEJ9 315 aaKnown RBP21.39■■□□□ 1.01
CSNK1D-213ENST00000580446 OVOS2A0A0G2JMS6 1433 aa21.38■■□□□ 1.01
CSNK1D-213ENST00000580446 OVOS2A0A0J9YW53 1432 aa21.38■■□□□ 1.01
CSNK1D-213ENST00000580446 PIK3C2GO75747 1445 aa21.38■■□□□ 1.01
CSNK1D-213ENST00000580446 OVOS2Q6IE36 1432 aa21.38■■□□□ 1.01
CSNK1D-213ENST00000580446 SLC15A2Q16348 729 aa21.38■■□□□ 1.01
CSNK1D-213ENST00000580446 PEAK1Q9H792 1746 aa21.36■■□□□ 1.01
CSNK1D-213ENST00000580446 POGKQ9P215 609 aa21.36■■□□□ 1.01
CSNK1D-213ENST00000580446 MINK1Q8N4C8 1332 aaPredicted RBP21.35■■□□□ 1.01
CSNK1D-213ENST00000580446 TXNRD1Q16881 649 aa21.35■■□□□ 1.01
CSNK1D-213ENST00000580446 SIRT1Q96EB6 747 aa21.35■■□□□ 1.01
CSNK1D-213ENST00000580446 PHRF1Q9P1Y6 1649 aaKnown RBP21.35■■□□□ 1.01
CSNK1D-213ENST00000580446 CFAP70Q5T0N1 1121 aa21.34■■□□□ 1.01
CSNK1D-213ENST00000580446 HSPA6P17066 643 aa21.33■■□□□ 1.01
CSNK1D-213ENST00000580446 SLC4A1APQ9BWU0 796 aaKnown RBP21.33■■□□□ 1.01
CSNK1D-213ENST00000580446 RGPD3A6NKT7 1758 aaPredicted RBP21.33■■□□□ 1
CSNK1D-213ENST00000580446 RGPD4Q7Z3J3 1758 aa21.33■■□□□ 1
CSNK1D-213ENST00000580446 ZNF526Q8TF50 670 aaPredicted RBP21.32■■□□□ 1
CSNK1D-213ENST00000580446 ATP10DQ9P241 1426 aa21.31■■□□□ 1
CSNK1D-213ENST00000580446 ZBTB7CA1YPR0 619 aa21.31■■□□□ 1
CSNK1D-213ENST00000580446 NLGN2Q8NFZ4 835 aa21.31■■□□□ 1
CSNK1D-213ENST00000580446 ANKRD30BQ9BXX2 1392 aa21.31■■□□□ 1
CSNK1D-213ENST00000580446 SPATA31E1Q6ZUB1 1445 aa21.3■■□□□ 1
CSNK1D-213ENST00000580446 GOLGB1Q14789 3259 aaKnown RBP21.3■■□□□ 1
CSNK1D-213ENST00000580446 PARP4Q9UKK3 1724 aaKnown RBP21.29■■□□□ 1
CSNK1D-213ENST00000580446 ATP7BP35670 1465 aa21.29■■□□□ 1
CSNK1D-213ENST00000580446 DHX57Q6P158 1386 aaKnown RBP21.29■■□□□ 1
CSNK1D-213ENST00000580446 MAP3K5Q99683 1374 aa21.29■■□□□ 1
CSNK1D-213ENST00000580446 PPARGC1BQ86YN6 1023 aaKnown RBP21.29■■□□□ 1
CSNK1D-213ENST00000580446 DDB1Q16531 1140 aa21.28■■□□□ 1
CSNK1D-213ENST00000580446 MARCH10Q8NA82 808 aaPredicted RBP21.28■■□□□ 1
CSNK1D-213ENST00000580446 C14orf93Q9H972 538 aaKnown RBP21.28■■□□□ 1
CSNK1D-213ENST00000580446 LRRC37A3O60309 1634 aa21.28■■□□□ 1
CSNK1D-213ENST00000580446 YBX3P16989 372 aaKnown RBP eCLIP21.27■■□□□ 12e-6■■■□□ 17
CSNK1D-213ENST00000580446 THRAP3Q9Y2W1 955 aaKnown RBP21.27■■□□□ 1
CSNK1D-213ENST00000580446 TULP4Q9NRJ4 1543 aa21.25■□□□□ 0.99
CSNK1D-213ENST00000580446 SBF2Q86WG5 1849 aa21.25■□□□□ 0.99
CSNK1D-213ENST00000580446 COL5A2P05997 1499 aaPredicted RBP21.25■□□□□ 0.99
CSNK1D-213ENST00000580446 LMO7Q8WWI1 1683 aa21.24■□□□□ 0.99
CSNK1D-213ENST00000580446 TRAK1Q9UPV9 953 aa21.24■□□□□ 0.99
CSNK1D-213ENST00000580446 C11orf95C9JLR9 678 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms