RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 SLC4A1APQ9BWU0 796 aaKnown RBP20.95■□□□□ 0.94
CSNK1D-211ENST00000579316 APBA3O96018 575 aa20.92■□□□□ 0.94
CSNK1D-211ENST00000579316 SPATA31A1Q5TZJ5 1347 aa20.92■□□□□ 0.94
CSNK1D-211ENST00000579316 PMFBP1Q8TBY8 1022 aa20.9■□□□□ 0.94
CSNK1D-211ENST00000579316 SPON1Q9HCB6 807 aa20.9■□□□□ 0.94
CSNK1D-211ENST00000579316 DCAF8L1A6NGE4 600 aa20.89■□□□□ 0.93
CSNK1D-211ENST00000579316 NBPF8Q3BBV2 869 aa20.89■□□□□ 0.93
CSNK1D-211ENST00000579316 RGL3Q3MIN7 710 aa20.89■□□□□ 0.93
CSNK1D-211ENST00000579316 NBPF14Q5TI25 921 aa20.89■□□□□ 0.93
CSNK1D-211ENST00000579316 C14orf93Q9H972 538 aaKnown RBP20.89■□□□□ 0.93
CSNK1D-211ENST00000579316 GPRASP1Q5JY77 1395 aa20.88■□□□□ 0.93
CSNK1D-211ENST00000579316 PRDM11Q9NQV5 511 aa20.88■□□□□ 0.93
CSNK1D-211ENST00000579316 DLC1Q96QB1 1528 aa20.88■□□□□ 0.93
CSNK1D-211ENST00000579316 DHX57Q6P158 1386 aaKnown RBP20.87■□□□□ 0.93
CSNK1D-211ENST00000579316 ACIN1Q9UKV3 1341 aaKnown RBP20.87■□□□□ 0.93
CSNK1D-211ENST00000579316 KCNQ2O43526 872 aa20.87■□□□□ 0.93
CSNK1D-211ENST00000579316 PRAM1Q96QH2 718 aa20.87■□□□□ 0.93
CSNK1D-211ENST00000579316 PPP1R1BQ9UD71 204 aaPredicted RBP20.87■□□□□ 0.93
CSNK1D-211ENST00000579316 UTRNP46939 3433 aa20.84■□□□□ 0.93
CSNK1D-211ENST00000579316 BARGINQ6ZT62 677 aa20.83■□□□□ 0.93
CSNK1D-211ENST00000579316 EIF3AQ14152 1382 aaKnown RBP20.83■□□□□ 0.92
CSNK1D-211ENST00000579316 KIAA0232Q92628 1395 aa20.83■□□□□ 0.92
CSNK1D-211ENST00000579316 CAMTA1Q9Y6Y1 1673 aa20.83■□□□□ 0.92
CSNK1D-211ENST00000579316 SAFB2Q14151 953 aaKnown RBP eCLIP20.82■□□□□ 0.921e-12■■■■■ 37.9
CSNK1D-211ENST00000579316 TULP4Q9NRJ4 1543 aa20.82■□□□□ 0.92
CSNK1D-211ENST00000579316 PRR36Q9H6K5 1346 aa20.8■□□□□ 0.92
CSNK1D-211ENST00000579316 CFAP70Q5T0N1 1121 aa20.8■□□□□ 0.92
CSNK1D-211ENST00000579316 RGPD3A6NKT7 1758 aaPredicted RBP20.8■□□□□ 0.92
CSNK1D-211ENST00000579316 RGPD4Q7Z3J3 1758 aa20.8■□□□□ 0.92
CSNK1D-211ENST00000579316 PHRF1Q9P1Y6 1649 aaKnown RBP20.79■□□□□ 0.92
CSNK1D-211ENST00000579316 PDE3BQ13370 1112 aa20.79■□□□□ 0.92
CSNK1D-211ENST00000579316 ZNF784Q8NCA9 323 aaPredicted RBP20.79■□□□□ 0.92
CSNK1D-211ENST00000579316 SSH2Q76I76 1423 aa20.78■□□□□ 0.92
CSNK1D-211ENST00000579316 POGKQ9P215 609 aa20.78■□□□□ 0.92
CSNK1D-211ENST00000579316 CASZ1Q86V15 1759 aa20.77■□□□□ 0.92
CSNK1D-211ENST00000579316 STRN4Q9NRL3 753 aa20.77■□□□□ 0.92
CSNK1D-211ENST00000579316 CHRNA2Q15822 529 aa20.76■□□□□ 0.91
CSNK1D-211ENST00000579316 ADGRB1O14514 1584 aa20.76■□□□□ 0.91
CSNK1D-211ENST00000579316 NRKQ7Z2Y5 1582 aa20.75■□□□□ 0.91
CSNK1D-211ENST00000579316 ATP7BP35670 1465 aa20.75■□□□□ 0.91
CSNK1D-211ENST00000579316 C11orf95C9JLR9 678 aaPredicted RBP20.74■□□□□ 0.91
CSNK1D-211ENST00000579316 PAK3O75914 559 aaPredicted RBP20.74■□□□□ 0.91
CSNK1D-211ENST00000579316 PPARGC1BQ86YN6 1023 aaKnown RBP20.74■□□□□ 0.91
CSNK1D-211ENST00000579316 PARP4Q9UKK3 1724 aaKnown RBP20.73■□□□□ 0.91
CSNK1D-211ENST00000579316 NGDNQ8NEJ9 315 aaKnown RBP20.73■□□□□ 0.91
CSNK1D-211ENST00000579316 USP35Q9P2H5 1018 aa20.73■□□□□ 0.91
CSNK1D-211ENST00000579316 TCP11L2Q8N4U5 519 aa20.72■□□□□ 0.91
CSNK1D-211ENST00000579316 HIRIP3Q9BW71 556 aaPredicted RBP20.72■□□□□ 0.91
CSNK1D-211ENST00000579316 LMO7Q8WWI1 1683 aa20.72■□□□□ 0.91
CSNK1D-211ENST00000579316 PEAK1Q9H792 1746 aa20.72■□□□□ 0.91
CSNK1D-211ENST00000579316 WASLO00401 505 aaPredicted RBP20.71■□□□□ 0.91
CSNK1D-211ENST00000579316 IFFO2Q5TF58 517 aa20.71■□□□□ 0.91
CSNK1D-211ENST00000579316 THRAP3Q9Y2W1 955 aaKnown RBP20.71■□□□□ 0.91
CSNK1D-211ENST00000579316 SENP3-EIF4A1A0A087X0R7 540 aa20.7■□□□□ 0.9
CSNK1D-211ENST00000579316 PLSCR1O15162 318 aa20.7■□□□□ 0.9
CSNK1D-211ENST00000579316 MPHOSPH9Q99550 1183 aa20.7■□□□□ 0.9
CSNK1D-211ENST00000579316 MINK1Q8N4C8 1332 aaPredicted RBP20.7■□□□□ 0.9
CSNK1D-211ENST00000579316 MYOM1P52179 1685 aa20.7■□□□□ 0.9
CSNK1D-211ENST00000579316 ITSN1Q15811 1721 aa20.7■□□□□ 0.9
CSNK1D-211ENST00000579316 EVA1CP58658 441 aa20.69■□□□□ 0.9
CSNK1D-211ENST00000579316 ZC3H6P61129 1189 aaKnown RBP20.69■□□□□ 0.9
CSNK1D-211ENST00000579316 LARP1Q6PKG0 1096 aaKnown RBP20.69■□□□□ 0.9
CSNK1D-211ENST00000579316 ANO8Q9HCE9 1232 aaPredicted RBP20.69■□□□□ 0.9
CSNK1D-211ENST00000579316 CPDO75976 1380 aa20.69■□□□□ 0.9
CSNK1D-211ENST00000579316 C1QTNF8P60827 252 aa20.68■□□□□ 0.9
CSNK1D-211ENST00000579316 OVOS2A0A0G2JMS6 1433 aa20.68■□□□□ 0.9
CSNK1D-211ENST00000579316 OVOS2A0A0J9YW53 1432 aa20.68■□□□□ 0.9
CSNK1D-211ENST00000579316 OVOS2Q6IE36 1432 aa20.68■□□□□ 0.9
CSNK1D-211ENST00000579316 PTGER2P43116 358 aa20.67■□□□□ 0.9
CSNK1D-211ENST00000579316 CHD4Q14839 1912 aa20.66■□□□□ 0.9
CSNK1D-211ENST00000579316 SBF2Q86WG5 1849 aa20.65■□□□□ 0.9
CSNK1D-211ENST00000579316 TRAK1Q9UPV9 953 aa20.65■□□□□ 0.9
CSNK1D-211ENST00000579316 PDGFDQ9GZP0 370 aaPredicted RBP20.64■□□□□ 0.89
CSNK1D-211ENST00000579316 POLR3AO14802 1390 aaPredicted RBP20.63■□□□□ 0.89
CSNK1D-211ENST00000579316 COL5A2P05997 1499 aaPredicted RBP20.62■□□□□ 0.89
CSNK1D-211ENST00000579316 USP19O94966 1318 aa20.62■□□□□ 0.89
CSNK1D-211ENST00000579316 LRRC37A3O60309 1634 aa20.61■□□□□ 0.89
CSNK1D-211ENST00000579316 ZBTB7AO95365 584 aa20.61■□□□□ 0.89
CSNK1D-211ENST00000579316 NUTM2GQ5VZR2 741 aa20.61■□□□□ 0.89
CSNK1D-211ENST00000579316 NUDT16Q96DE0 195 aaKnown RBP20.61■□□□□ 0.89
CSNK1D-211ENST00000579316 SYT17Q9BSW7 474 aa20.6■□□□□ 0.89
CSNK1D-211ENST00000579316 BCL11BQ9C0K0 894 aaPredicted RBP20.6■□□□□ 0.89
CSNK1D-211ENST00000579316 TOPAZ1Q8N9V7 1692 aa20.6■□□□□ 0.89
CSNK1D-211ENST00000579316 BCL9O00512 1426 aa20.6■□□□□ 0.89
CSNK1D-211ENST00000579316 CRB1P82279 1406 aa20.6■□□□□ 0.89
CSNK1D-211ENST00000579316 PROM2Q8N271 834 aa20.59■□□□□ 0.89
CSNK1D-211ENST00000579316 FHDC1Q9C0D6 1143 aaPredicted RBP20.59■□□□□ 0.89
CSNK1D-211ENST00000579316 CEP350Q5VT06 3117 aa20.59■□□□□ 0.89
CSNK1D-211ENST00000579316 SGIP1Q9BQI5 828 aa20.57■□□□□ 0.88
CSNK1D-211ENST00000579316 PTF1AQ7RTS3 328 aa20.56■□□□□ 0.88
CSNK1D-211ENST00000579316 ATF5Q9Y2D1 282 aaPredicted RBP20.56■□□□□ 0.88
CSNK1D-211ENST00000579316 MAP3K5Q99683 1374 aa20.56■□□□□ 0.88
CSNK1D-211ENST00000579316 ARHGEF28Q8N1W1 1705 aaKnown RBP20.56■□□□□ 0.88
CSNK1D-211ENST00000579316 ACEP12821 1306 aa20.55■□□□□ 0.88
CSNK1D-211ENST00000579316 PLEKHG3A1L390 1219 aa20.54■□□□□ 0.88
CSNK1D-211ENST00000579316 MTFR1LQ9H019 292 aa20.54■□□□□ 0.88
CSNK1D-211ENST00000579316 AATKQ6ZMQ8 1374 aa20.54■□□□□ 0.88
CSNK1D-211ENST00000579316 GCP02774 474 aa20.53■□□□□ 0.88
CSNK1D-211ENST00000579316 DDB1Q16531 1140 aa20.53■□□□□ 0.88
CSNK1D-211ENST00000579316 ABTB2Q8N961 1025 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms