RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 NBPF14Q5TI25 921 aa21.29■■□□□ 1
PPP4R1-206ENST00000577779 RREB1Q92766 1687 aa21.28■■□□□ 1
PPP4R1-206ENST00000577779 UTRNP46939 3433 aa21.28■■□□□ 1
PPP4R1-206ENST00000577779 PIK3C2GO75747 1445 aa21.28■■□□□ 1
PPP4R1-206ENST00000577779 TRPM3Q9HCF6 1732 aaPredicted RBP21.27■■□□□ 1
PPP4R1-206ENST00000577779 SPON1Q9HCB6 807 aa21.27■■□□□ 1
PPP4R1-206ENST00000577779 NUP188Q5SRE5 1749 aa21.26■□□□□ 0.99
PPP4R1-206ENST00000577779 SAFB2Q14151 953 aaKnown RBP eCLIP21.26■□□□□ 0.99
PPP4R1-206ENST00000577779 NINLQ9Y2I6 1382 aa21.25■□□□□ 0.99
PPP4R1-206ENST00000577779 ALS2Q96Q42 1657 aa21.25■□□□□ 0.99
PPP4R1-206ENST00000577779 PRDM11Q9NQV5 511 aa21.25■□□□□ 0.99
PPP4R1-206ENST00000577779 SPATA31A1Q5TZJ5 1347 aa21.25■□□□□ 0.99
PPP4R1-206ENST00000577779 SPATA31E1Q6ZUB1 1445 aa21.24■□□□□ 0.99
PPP4R1-206ENST00000577779 ANKARQ7Z5J8 1434 aa21.24■□□□□ 0.99
PPP4R1-206ENST00000577779 GPRASP1Q5JY77 1395 aa21.23■□□□□ 0.99
PPP4R1-206ENST00000577779 KCNQ2O43526 872 aa21.23■□□□□ 0.99
PPP4R1-206ENST00000577779 PPARGC1BQ86YN6 1023 aaKnown RBP21.23■□□□□ 0.99
PPP4R1-206ENST00000577779 PRAM1Q96QH2 718 aa21.23■□□□□ 0.99
PPP4R1-206ENST00000577779 DHX57Q6P158 1386 aaKnown RBP21.21■□□□□ 0.99
PPP4R1-206ENST00000577779 STRN4Q9NRL3 753 aa21.2■□□□□ 0.98
PPP4R1-206ENST00000577779 CAMTA1Q9Y6Y1 1673 aa21.2■□□□□ 0.98
PPP4R1-206ENST00000577779 CRYBG1Q9Y4K1 1723 aa21.2■□□□□ 0.98
PPP4R1-206ENST00000577779 PDE3BQ13370 1112 aa21.19■□□□□ 0.98
PPP4R1-206ENST00000577779 ACIN1Q9UKV3 1341 aaKnown RBP21.19■□□□□ 0.98
PPP4R1-206ENST00000577779 C14orf93Q9H972 538 aaKnown RBP21.18■□□□□ 0.98
PPP4R1-206ENST00000577779 POGKQ9P215 609 aa21.18■□□□□ 0.98
PPP4R1-206ENST00000577779 PAK3O75914 559 aaPredicted RBP21.17■□□□□ 0.98
PPP4R1-206ENST00000577779 USP35Q9P2H5 1018 aa21.17■□□□□ 0.98
PPP4R1-206ENST00000577779 KIAA0232Q92628 1395 aa21.17■□□□□ 0.98
PPP4R1-206ENST00000577779 CHRNA2Q15822 529 aa21.16■□□□□ 0.98
PPP4R1-206ENST00000577779 ZNF784Q8NCA9 323 aaPredicted RBP21.16■□□□□ 0.98
PPP4R1-206ENST00000577779 CFAP70Q5T0N1 1121 aa21.15■□□□□ 0.98
PPP4R1-206ENST00000577779 SENP3-EIF4A1A0A087X0R7 540 aa21.14■□□□□ 0.97
PPP4R1-206ENST00000577779 CEP350Q5VT06 3117 aa21.14■□□□□ 0.97
PPP4R1-206ENST00000577779 BARGINQ6ZT62 677 aa21.13■□□□□ 0.97
PPP4R1-206ENST00000577779 NGDNQ8NEJ9 315 aaKnown RBP21.13■□□□□ 0.97
PPP4R1-206ENST00000577779 HIRIP3Q9BW71 556 aaPredicted RBP21.13■□□□□ 0.97
PPP4R1-206ENST00000577779 EIF3AQ14152 1382 aaKnown RBP21.12■□□□□ 0.97
PPP4R1-206ENST00000577779 PRR36Q9H6K5 1346 aa21.11■□□□□ 0.97
PPP4R1-206ENST00000577779 DLC1Q96QB1 1528 aa21.11■□□□□ 0.97
PPP4R1-206ENST00000577779 EVA1CP58658 441 aa21.11■□□□□ 0.97
PPP4R1-206ENST00000577779 ZC3H6P61129 1189 aaKnown RBP21.1■□□□□ 0.97
PPP4R1-206ENST00000577779 TULP4Q9NRJ4 1543 aa21.09■□□□□ 0.97
PPP4R1-206ENST00000577779 PHRF1Q9P1Y6 1649 aaKnown RBP21.09■□□□□ 0.97
PPP4R1-206ENST00000577779 SSH2Q76I76 1423 aa21.09■□□□□ 0.97
PPP4R1-206ENST00000577779 IFFO2Q5TF58 517 aa21.08■□□□□ 0.97
PPP4R1-206ENST00000577779 NRKQ7Z2Y5 1582 aa21.08■□□□□ 0.97
PPP4R1-206ENST00000577779 MINK1Q8N4C8 1332 aaPredicted RBP21.07■□□□□ 0.96
PPP4R1-206ENST00000577779 TCP11L2Q8N4U5 519 aa21.07■□□□□ 0.96
PPP4R1-206ENST00000577779 CASZ1Q86V15 1759 aa21.05■□□□□ 0.96
PPP4R1-206ENST00000577779 LARP1Q6PKG0 1096 aaKnown RBP21.05■□□□□ 0.96
PPP4R1-206ENST00000577779 WASLO00401 505 aaPredicted RBP21.04■□□□□ 0.96
PPP4R1-206ENST00000577779 C1QTNF8P60827 252 aa21.04■□□□□ 0.96
PPP4R1-206ENST00000577779 NUTM2GQ5VZR2 741 aa21.04■□□□□ 0.96
PPP4R1-206ENST00000577779 RGPD3A6NKT7 1758 aaPredicted RBP21.03■□□□□ 0.96
PPP4R1-206ENST00000577779 RGPD4Q7Z3J3 1758 aa21.03■□□□□ 0.96
PPP4R1-206ENST00000577779 C11orf95C9JLR9 678 aaPredicted RBP21.03■□□□□ 0.96
PPP4R1-206ENST00000577779 ANO8Q9HCE9 1232 aaPredicted RBP21.03■□□□□ 0.96
PPP4R1-206ENST00000577779 TRAK1Q9UPV9 953 aa21.03■□□□□ 0.96
PPP4R1-206ENST00000577779 MYOM1P52179 1685 aa21.02■□□□□ 0.96
PPP4R1-206ENST00000577779 ATP7BP35670 1465 aa21.02■□□□□ 0.96
PPP4R1-206ENST00000577779 ZBTB7AO95365 584 aa21.02■□□□□ 0.96
PPP4R1-206ENST00000577779 MPHOSPH9Q99550 1183 aa21.02■□□□□ 0.96
PPP4R1-206ENST00000577779 PDGFDQ9GZP0 370 aaPredicted RBP21.01■□□□□ 0.95
PPP4R1-206ENST00000577779 THRAP3Q9Y2W1 955 aaKnown RBP21.01■□□□□ 0.95
PPP4R1-206ENST00000577779 PARP4Q9UKK3 1724 aaKnown RBP21.01■□□□□ 0.95
PPP4R1-206ENST00000577779 CHD4Q14839 1912 aa21■□□□□ 0.95
PPP4R1-206ENST00000577779 PLSCR1O15162 318 aa21■□□□□ 0.95
PPP4R1-206ENST00000577779 ITSN1Q15811 1721 aa21■□□□□ 0.95
PPP4R1-206ENST00000577779 ADGRB1O14514 1584 aa20.99■□□□□ 0.95
PPP4R1-206ENST00000577779 OVOS2A0A0G2JMS6 1433 aa20.99■□□□□ 0.95
PPP4R1-206ENST00000577779 OVOS2A0A0J9YW53 1432 aa20.99■□□□□ 0.95
PPP4R1-206ENST00000577779 OVOS2Q6IE36 1432 aa20.99■□□□□ 0.95
PPP4R1-206ENST00000577779 BCL11BQ9C0K0 894 aaPredicted RBP20.99■□□□□ 0.95
PPP4R1-206ENST00000577779 GOLGB1Q14789 3259 aaKnown RBP20.98■□□□□ 0.95
PPP4R1-206ENST00000577779 PTGER2P43116 358 aa20.98■□□□□ 0.95
PPP4R1-206ENST00000577779 ATF5Q9Y2D1 282 aaPredicted RBP20.98■□□□□ 0.95
PPP4R1-206ENST00000577779 PEAK1Q9H792 1746 aa20.97■□□□□ 0.95
PPP4R1-206ENST00000577779 SBF2Q86WG5 1849 aa20.97■□□□□ 0.95
PPP4R1-206ENST00000577779 LMO7Q8WWI1 1683 aa20.96■□□□□ 0.95
PPP4R1-206ENST00000577779 SYT17Q9BSW7 474 aa20.96■□□□□ 0.95
PPP4R1-206ENST00000577779 FHDC1Q9C0D6 1143 aaPredicted RBP20.96■□□□□ 0.95
PPP4R1-206ENST00000577779 MSH5O43196 834 aa20.95■□□□□ 0.94
PPP4R1-206ENST00000577779 NUDT16Q96DE0 195 aaKnown RBP20.95■□□□□ 0.94
PPP4R1-206ENST00000577779 CPDO75976 1380 aa20.95■□□□□ 0.94
PPP4R1-206ENST00000577779 PTF1AQ7RTS3 328 aa20.92■□□□□ 0.94
PPP4R1-206ENST00000577779 COL5A2P05997 1499 aaPredicted RBP20.91■□□□□ 0.94
PPP4R1-206ENST00000577779 PROM2Q8N271 834 aa20.91■□□□□ 0.94
PPP4R1-206ENST00000577779 ABTB2Q8N961 1025 aa20.91■□□□□ 0.94
PPP4R1-206ENST00000577779 STK32BQ9NY57 414 aa20.91■□□□□ 0.94
PPP4R1-206ENST00000577779 LRRC37A3O60309 1634 aa20.9■□□□□ 0.94
PPP4R1-206ENST00000577779 CRB1P82279 1406 aa20.9■□□□□ 0.94
PPP4R1-206ENST00000577779 DDB1Q16531 1140 aa20.9■□□□□ 0.94
PPP4R1-206ENST00000577779 POLR3AO14802 1390 aaPredicted RBP20.89■□□□□ 0.93
PPP4R1-206ENST00000577779 USP19O94966 1318 aa20.89■□□□□ 0.93
PPP4R1-206ENST00000577779 ACEP12821 1306 aa20.89■□□□□ 0.93
PPP4R1-206ENST00000577779 MTFR1LQ9H019 292 aa20.88■□□□□ 0.93
PPP4R1-206ENST00000577779 GIGYF1O75420 1035 aaPredicted RBP20.87■□□□□ 0.93
PPP4R1-206ENST00000577779 GCP02774 474 aa20.86■□□□□ 0.93
PPP4R1-206ENST00000577779 SLC15A2Q16348 729 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms