RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 FAM196AQ6ZSG2 479 aa15.29■□□□□ 0.04
CHMP6-203ENST00000572525 EIF3AQ14152 1382 aaKnown RBP15.28■□□□□ 0.04
CHMP6-203ENST00000572525 EZH2Q15910 746 aaKnown RBP15.28■□□□□ 0.04
CHMP6-203ENST00000572525 TMEM132EQ6IEE7 984 aa15.28■□□□□ 0.04
CHMP6-203ENST00000572525 DHX57Q6P158 1386 aaKnown RBP15.27■□□□□ 0.04
CHMP6-203ENST00000572525 PARP4Q9UKK3 1724 aaKnown RBP15.26■□□□□ 0.03
CHMP6-203ENST00000572525 GPRASP1Q5JY77 1395 aa15.26■□□□□ 0.03
CHMP6-203ENST00000572525 LMOD2Q6P5Q4 547 aa15.26■□□□□ 0.03
CHMP6-203ENST00000572525 C14orf93Q9H972 538 aaKnown RBP15.26■□□□□ 0.03
CHMP6-203ENST00000572525 TULP4Q9NRJ4 1543 aa15.26■□□□□ 0.03
CHMP6-203ENST00000572525 SBF2Q86WG5 1849 aa15.26■□□□□ 0.03
CHMP6-203ENST00000572525 SPATA31A1Q5TZJ5 1347 aa15.25■□□□□ 0.03
CHMP6-203ENST00000572525 CASZ1Q86V15 1759 aa15.24■□□□□ 0.03
CHMP6-203ENST00000572525 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
CHMP6-203ENST00000572525 NBPF8Q3BBV2 869 aa15.23■□□□□ 0.03
CHMP6-203ENST00000572525 FAM182BQ5T319 152 aa15.23■□□□□ 0.03
CHMP6-203ENST00000572525 NBPF14Q5TI25 921 aa15.23■□□□□ 0.03
CHMP6-203ENST00000572525 ACIN1Q9UKV3 1341 aaKnown RBP15.22■□□□□ 0.03
CHMP6-203ENST00000572525 ATP7BP35670 1465 aa15.22■□□□□ 0.03
CHMP6-203ENST00000572525 C11orf95C9JLR9 678 aaPredicted RBP15.22■□□□□ 0.03
CHMP6-203ENST00000572525 TRIM37O94972 964 aa15.22■□□□□ 0.03
CHMP6-203ENST00000572525 SPON1Q9HCB6 807 aa15.22■□□□□ 0.03
CHMP6-203ENST00000572525 ADGRB1O14514 1584 aa15.21■□□□□ 0.03
CHMP6-203ENST00000572525 APBA3O96018 575 aa15.21■□□□□ 0.03
CHMP6-203ENST00000572525 RGL3Q3MIN7 710 aa15.21■□□□□ 0.03
CHMP6-203ENST00000572525 BARGINQ6ZT62 677 aa15.21■□□□□ 0.03
CHMP6-203ENST00000572525 LMO7Q8WWI1 1683 aa15.21■□□□□ 0.03
CHMP6-203ENST00000572525 CAMTA1Q9Y6Y1 1673 aa15.21■□□□□ 0.03
CHMP6-203ENST00000572525 PMFBP1Q8TBY8 1022 aa15.2■□□□□ 0.02
CHMP6-203ENST00000572525 PRAM1Q96QH2 718 aa15.2■□□□□ 0.02
CHMP6-203ENST00000572525 PRDM11Q9NQV5 511 aa15.2■□□□□ 0.02
CHMP6-203ENST00000572525 PEAK1Q9H792 1746 aa15.2■□□□□ 0.02
CHMP6-203ENST00000572525 KCNQ2O43526 872 aa15.19■□□□□ 0.02
CHMP6-203ENST00000572525 PPP1R1BQ9UD71 204 aaPredicted RBP15.18■□□□□ 0.02
CHMP6-203ENST00000572525 TOPAZ1Q8N9V7 1692 aa15.17■□□□□ 0.02
CHMP6-203ENST00000572525 NRKQ7Z2Y5 1582 aa15.17■□□□□ 0.02
CHMP6-203ENST00000572525 KIAA0232Q92628 1395 aa15.17■□□□□ 0.02
CHMP6-203ENST00000572525 PLEKHG5O94827 1062 aa15.17■□□□□ 0.02
CHMP6-203ENST00000572525 UTRNP46939 3433 aa15.17■□□□□ 0.02
CHMP6-203ENST00000572525 SSH2Q76I76 1423 aa15.17■□□□□ 0.02
CHMP6-203ENST00000572525 PRR36Q9H6K5 1346 aa15.16■□□□□ 0.02
CHMP6-203ENST00000572525 WNK3Q9BYP7 1800 aa15.15■□□□□ 0.02
CHMP6-203ENST00000572525 ARHGEF28Q8N1W1 1705 aaKnown RBP15.15■□□□□ 0.02
CHMP6-203ENST00000572525 POGKQ9P215 609 aa15.15■□□□□ 0.02
CHMP6-203ENST00000572525 PDE3BQ13370 1112 aa15.14■□□□□ 0.01
CHMP6-203ENST00000572525 CFAP70Q5T0N1 1121 aa15.14■□□□□ 0.01
CHMP6-203ENST00000572525 THRAP3Q9Y2W1 955 aaKnown RBP15.14■□□□□ 0.01
CHMP6-203ENST00000572525 AKAP12Q02952 1782 aa15.13■□□□□ 0.01
CHMP6-203ENST00000572525 CPDO75976 1380 aa15.13■□□□□ 0.01
CHMP6-203ENST00000572525 MYOM1P52179 1685 aa15.12■□□□□ 0.01
CHMP6-203ENST00000572525 WASLO00401 505 aaPredicted RBP15.12■□□□□ 0.01
CHMP6-203ENST00000572525 SAFB2Q14151 953 aaKnown RBP eCLIP15.12■□□□□ 0.01
CHMP6-203ENST00000572525 MPHOSPH9Q99550 1183 aa15.12■□□□□ 0.01
CHMP6-203ENST00000572525 OVOS2A0A0G2JMS6 1433 aa15.11■□□□□ 0.01
CHMP6-203ENST00000572525 OVOS2A0A0J9YW53 1432 aa15.11■□□□□ 0.01
CHMP6-203ENST00000572525 OVOS2Q6IE36 1432 aa15.11■□□□□ 0.01
CHMP6-203ENST00000572525 LRRC37A3O60309 1634 aa15.11■□□□□ 0.01
CHMP6-203ENST00000572525 PLSCR1O15162 318 aa15.11■□□□□ 0.01
CHMP6-203ENST00000572525 TCP11L2Q8N4U5 519 aa15.11■□□□□ 0.01
CHMP6-203ENST00000572525 NGDNQ8NEJ9 315 aaKnown RBP15.11■□□□□ 0.01
CHMP6-203ENST00000572525 CEP350Q5VT06 3117 aa15.1■□□□□ 0.01
CHMP6-203ENST00000572525 STRN4Q9NRL3 753 aa15.1■□□□□ 0.01
CHMP6-203ENST00000572525 POLR3AO14802 1390 aaPredicted RBP15.1■□□□□ 0.01
CHMP6-203ENST00000572525 BCL9O00512 1426 aa15.09■□□□□ 0.01
CHMP6-203ENST00000572525 ZNF784Q8NCA9 323 aaPredicted RBP15.09■□□□□ 0.01
CHMP6-203ENST00000572525 PAK3O75914 559 aaPredicted RBP15.08■□□□□ 0
CHMP6-203ENST00000572525 CHRNA2Q15822 529 aa15.08■□□□□ 0
CHMP6-203ENST00000572525 USP19O94966 1318 aa15.07■□□□□ 0
CHMP6-203ENST00000572525 COL5A2P05997 1499 aaPredicted RBP15.07■□□□□ 0
CHMP6-203ENST00000572525 EVA1CP58658 441 aa15.06■□□□□ 0
CHMP6-203ENST00000572525 STAC3Q96MF2 364 aa15.06■□□□□ 0
CHMP6-203ENST00000572525 HIRIP3Q9BW71 556 aaPredicted RBP15.06■□□□□ 0
CHMP6-203ENST00000572525 MINK1Q8N4C8 1332 aaPredicted RBP15.06■□□□□ 0
CHMP6-203ENST00000572525 USP35Q9P2H5 1018 aa15.05■□□□□ -0
CHMP6-203ENST00000572525 CRB1P82279 1406 aa15.05■□□□□ -0
CHMP6-203ENST00000572525 BRD4O60885 1362 aaPredicted RBP15.04■□□□□ -0
CHMP6-203ENST00000572525 AATKQ6ZMQ8 1374 aa15.04■□□□□ -0
CHMP6-203ENST00000572525 ZC3H6P61129 1189 aaKnown RBP15.04■□□□□ -0
CHMP6-203ENST00000572525 IFFO2Q5TF58 517 aa15.04■□□□□ -0
CHMP6-203ENST00000572525 LARP1Q6PKG0 1096 aaKnown RBP15.04■□□□□ -0
CHMP6-203ENST00000572525 TRAK1Q9UPV9 953 aa15.04■□□□□ -0
CHMP6-203ENST00000572525 COL18A1P39060 1754 aa15.03■□□□□ -0
CHMP6-203ENST00000572525 MAP3K5Q99683 1374 aa15.03■□□□□ -0
CHMP6-203ENST00000572525 PPARGC1BQ86YN6 1023 aaKnown RBP15.03■□□□□ -0
CHMP6-203ENST00000572525 ANO8Q9HCE9 1232 aaPredicted RBP15.03■□□□□ -0
CHMP6-203ENST00000572525 COL24A1Q17RW2 1714 aa15.03■□□□□ -0
CHMP6-203ENST00000572525 QSER1Q2KHR3 1735 aa15.03■□□□□ -0
CHMP6-203ENST00000572525 KIAA1210Q9ULL0 1709 aa15.03■□□□□ -0
CHMP6-203ENST00000572525 PTGER2P43116 358 aa15.02■□□□□ -0
CHMP6-203ENST00000572525 C1QTNF8P60827 252 aa15.02■□□□□ -0
CHMP6-203ENST00000572525 NUDT16Q96DE0 195 aaKnown RBP15.02■□□□□ -0
CHMP6-203ENST00000572525 BCL11BQ9C0K0 894 aaPredicted RBP15.02■□□□□ -0
CHMP6-203ENST00000572525 SENP3-EIF4A1A0A087X0R7 540 aa15□□□□□ -0.01
CHMP6-203ENST00000572525 PLEKHG3A1L390 1219 aa15□□□□□ -0.01
CHMP6-203ENST00000572525 SLIT3O75094 1523 aa15□□□□□ -0.01
CHMP6-203ENST00000572525 ACEP12821 1306 aa14.99□□□□□ -0.01
CHMP6-203ENST00000572525 CCDC61Q9Y6R9 512 aa14.99□□□□□ -0.01
CHMP6-203ENST00000572525 NHSQ6T4R5 1651 aa14.99□□□□□ -0.01
CHMP6-203ENST00000572525 PAPPAQ13219 1627 aa14.99□□□□□ -0.01
CHMP6-203ENST00000572525 GOLGB1Q14789 3259 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms