RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 GPHNQ9NQX3 736 aaPredicted RBP13.41□□□□□ -0.26
CAPN3-219ENST00000569136 TMEM131LA2VDJ0 1609 aa13.41□□□□□ -0.26
CAPN3-219ENST00000569136 TRPM2O94759 1503 aa13.4□□□□□ -0.26
CAPN3-219ENST00000569136 LHX8Q68G74 356 aa13.4□□□□□ -0.26
CAPN3-219ENST00000569136 TMEM92Q6UXU6 159 aa13.4□□□□□ -0.26
CAPN3-219ENST00000569136 AMOTL2Q9Y2J4 779 aa13.4□□□□□ -0.26
CAPN3-219ENST00000569136 ANKRD30BQ9BXX2 1392 aa13.39□□□□□ -0.27
CAPN3-219ENST00000569136 IQGAP1P46940 1657 aa13.38□□□□□ -0.27
CAPN3-219ENST00000569136 ADAMTS13Q76LX8 1427 aa13.38□□□□□ -0.27
CAPN3-219ENST00000569136 TMEM94Q12767 1356 aa13.37□□□□□ -0.27
CAPN3-219ENST00000569136 PPP1R15BQ5SWA1 713 aa13.37□□□□□ -0.27
CAPN3-219ENST00000569136 SLAIN1Q8ND83 568 aa13.37□□□□□ -0.27
CAPN3-219ENST00000569136 C19orf44Q9H6X5 657 aa13.37□□□□□ -0.27
CAPN3-219ENST00000569136 LRRC7Q96NW7 1537 aa13.37□□□□□ -0.27
CAPN3-219ENST00000569136 NCOA3Q9Y6Q9 1424 aa13.37□□□□□ -0.27
CAPN3-219ENST00000569136 PIP4K2BP78356 416 aa13.36□□□□□ -0.27
CAPN3-219ENST00000569136 DSG2Q14126 1118 aa13.36□□□□□ -0.27
CAPN3-219ENST00000569136 C14orf37Q86TY3 774 aa13.35□□□□□ -0.27
CAPN3-219ENST00000569136 POLR1AO95602 1720 aaPredicted RBP13.35□□□□□ -0.27
CAPN3-219ENST00000569136 SPATA31E1Q6ZUB1 1445 aa13.34□□□□□ -0.27
CAPN3-219ENST00000569136 ADGRF5Q8IZF2 1346 aa13.34□□□□□ -0.27
CAPN3-219ENST00000569136 KIF3CO14782 793 aa13.33□□□□□ -0.28
CAPN3-219ENST00000569136 ATF3P18847 181 aa13.33□□□□□ -0.28
CAPN3-219ENST00000569136 MFSD10Q14728 455 aa13.33□□□□□ -0.28
CAPN3-219ENST00000569136 PLPP6Q8IY26 295 aa13.33□□□□□ -0.28
CAPN3-219ENST00000569136 SLAIN2Q9P270 581 aa13.33□□□□□ -0.28
CAPN3-219ENST00000569136 METP08581 1390 aa13.32□□□□□ -0.28
CAPN3-219ENST00000569136 MSH6P52701 1360 aa13.32□□□□□ -0.28
CAPN3-219ENST00000569136 FOXK1P85037 733 aa13.32□□□□□ -0.28
CAPN3-219ENST00000569136 RBM33Q96EV2 1170 aaKnown RBP13.32□□□□□ -0.28
CAPN3-219ENST00000569136 C14orf93Q9H972 538 aaKnown RBP13.32□□□□□ -0.28
CAPN3-219ENST00000569136 NKTRP30414 1462 aaKnown RBP13.31□□□□□ -0.28
CAPN3-219ENST00000569136 SPHKAPQ2M3C7 1700 aa13.31□□□□□ -0.28
CAPN3-219ENST00000569136 E2F4Q16254 413 aa13.3□□□□□ -0.28
CAPN3-219ENST00000569136 DCAF11Q8TEB1 546 aa13.3□□□□□ -0.28
CAPN3-219ENST00000569136 SIRT1Q96EB6 747 aa13.3□□□□□ -0.28
CAPN3-219ENST00000569136 CLTCL1P53675 1640 aa13.3□□□□□ -0.28
CAPN3-219ENST00000569136 DIP2AQ14689 1571 aa13.28□□□□□ -0.28
CAPN3-219ENST00000569136 HSPA1LP34931 641 aa13.28□□□□□ -0.28
CAPN3-219ENST00000569136 FAM135BQ49AJ0 1406 aa13.28□□□□□ -0.28
CAPN3-219ENST00000569136 NEXMIFQ5QGS0 1516 aa13.28□□□□□ -0.28
CAPN3-219ENST00000569136 SETBP1Q9Y6X0 1596 aa13.28□□□□□ -0.28
CAPN3-219ENST00000569136 OTUD5Q96G74 571 aa13.27□□□□□ -0.29
CAPN3-219ENST00000569136 PTPRUQ92729 1446 aa13.27□□□□□ -0.29
CAPN3-219ENST00000569136 STK26Q9P289 416 aa13.26□□□□□ -0.29
CAPN3-219ENST00000569136 DHX57Q6P158 1386 aaKnown RBP13.25□□□□□ -0.29
CAPN3-219ENST00000569136 ABCC11Q96J66 1382 aa13.25□□□□□ -0.29
CAPN3-219ENST00000569136 CFAP70Q5T0N1 1121 aa13.25□□□□□ -0.29
CAPN3-219ENST00000569136 TMEM132EQ6IEE7 984 aa13.25□□□□□ -0.29
CAPN3-219ENST00000569136 KCNV2Q8TDN2 545 aa13.24□□□□□ -0.29
CAPN3-219ENST00000569136 LRPPRCP42704 1394 aaKnown RBP13.23□□□□□ -0.29
CAPN3-219ENST00000569136 KIF1BO60333 1816 aa13.23□□□□□ -0.29
CAPN3-219ENST00000569136 UPF1Q92900 1129 aaKnown RBP eCLIP13.22□□□□□ -0.29
CAPN3-219ENST00000569136 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
CAPN3-219ENST00000569136 PIK3C2GO75747 1445 aa13.22□□□□□ -0.29
CAPN3-219ENST00000569136 ROBO2Q9HCK4 1378 aa13.21□□□□□ -0.29
CAPN3-219ENST00000569136 MYO5BQ9ULV0 1848 aa13.21□□□□□ -0.29
CAPN3-219ENST00000569136 ALKQ9UM73 1620 aa13.21□□□□□ -0.3
CAPN3-219ENST00000569136 NEUROD1Q13562 356 aa13.2□□□□□ -0.3
CAPN3-219ENST00000569136 WAPLQ7Z5K2 1190 aa13.2□□□□□ -0.3
CAPN3-219ENST00000569136 DCCP43146 1447 aa13.2□□□□□ -0.3
CAPN3-219ENST00000569136 PTCH1Q13635 1447 aa13.2□□□□□ -0.3
CAPN3-219ENST00000569136 STRCP1A6NGW2 1772 aa13.2□□□□□ -0.3
CAPN3-219ENST00000569136 NRXN1Q9ULB1 1477 aa13.19□□□□□ -0.3
CAPN3-219ENST00000569136 L3MBTL2Q969R5 705 aa13.19□□□□□ -0.3
CAPN3-219ENST00000569136 SIN3AQ96ST3 1273 aa13.19□□□□□ -0.3
CAPN3-219ENST00000569136 POGKQ9P215 609 aa13.19□□□□□ -0.3
CAPN3-219ENST00000569136 PRAG1Q86YV5 1406 aa13.19□□□□□ -0.3
CAPN3-219ENST00000569136 CHD2O14647 1828 aaKnown RBP13.18□□□□□ -0.3
CAPN3-219ENST00000569136 MYOM2P54296 1465 aa13.18□□□□□ -0.3
CAPN3-219ENST00000569136 YTHDC2Q9H6S0 1430 aaKnown RBP13.17□□□□□ -0.3
CAPN3-219ENST00000569136 CAMK2BQ13554 666 aa13.17□□□□□ -0.3
CAPN3-219ENST00000569136 BRINP3Q76B58 766 aa13.17□□□□□ -0.3
CAPN3-219ENST00000569136 TECPR2O15040 1411 aa13.16□□□□□ -0.3
CAPN3-219ENST00000569136 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
CAPN3-219ENST00000569136 NBR1Q14596 966 aa13.16□□□□□ -0.3
CAPN3-219ENST00000569136 PRAM1Q96QH2 718 aa13.16□□□□□ -0.3
CAPN3-219ENST00000569136 EMILIN3Q9NT22 766 aa13.16□□□□□ -0.3
CAPN3-219ENST00000569136 NRXN3Q9Y4C0 1643 aa13.16□□□□□ -0.3
CAPN3-219ENST00000569136 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
CAPN3-219ENST00000569136 DOK7Q18PE1 504 aa13.15□□□□□ -0.3
CAPN3-219ENST00000569136 TRAK1Q9UPV9 953 aa13.15□□□□□ -0.3
CAPN3-219ENST00000569136 DPYSL4O14531 572 aa13.14□□□□□ -0.31
CAPN3-219ENST00000569136 SNPHO15079 494 aa13.14□□□□□ -0.31
CAPN3-219ENST00000569136 ZNF710Q8N1W2 664 aa13.14□□□□□ -0.31
CAPN3-219ENST00000569136 LRRC59Q96AG4 307 aaKnown RBP13.14□□□□□ -0.31
CAPN3-219ENST00000569136 PCGF6Q9BYE7 350 aa13.14□□□□□ -0.31
CAPN3-219ENST00000569136 ESCO1Q5FWF5 840 aa13.13□□□□□ -0.31
CAPN3-219ENST00000569136 ARHGEF1Q92888 912 aaKnown RBP13.13□□□□□ -0.31
CAPN3-219ENST00000569136 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
CAPN3-219ENST00000569136 TBC1D12O60347 775 aa13.12□□□□□ -0.31
CAPN3-219ENST00000569136 PPLO60437 1756 aa13.12□□□□□ -0.31
CAPN3-219ENST00000569136 ORAI2Q96SN7 254 aa13.11□□□□□ -0.31
CAPN3-219ENST00000569136 DISP3Q9P2K9 1392 aa13.1□□□□□ -0.31
CAPN3-219ENST00000569136 SAFB2Q14151 953 aaKnown RBP eCLIP13.1□□□□□ -0.31
CAPN3-219ENST00000569136 NBPF1Q3BBV0 1214 aa13.1□□□□□ -0.31
CAPN3-219ENST00000569136 TIMELESSQ9UNS1 1208 aa13.1□□□□□ -0.31
CAPN3-219ENST00000569136 MST1RQ04912 1400 aa13.1□□□□□ -0.31
CAPN3-219ENST00000569136 XRN1Q8IZH2 1706 aaKnown RBP13.1□□□□□ -0.31
CAPN3-219ENST00000569136 CLSPNQ9HAW4 1339 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms