RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 FAM196AQ6ZSG2 479 aa17.94■□□□□ 0.46
VPS9D1-207ENST00000568691 ZNF784Q8NCA9 323 aaPredicted RBP17.94■□□□□ 0.46
VPS9D1-207ENST00000568691 SIRT1Q96EB6 747 aa17.94■□□□□ 0.46
VPS9D1-207ENST00000568691 CRYBG1Q9Y4K1 1723 aa17.94■□□□□ 0.46
VPS9D1-207ENST00000568691 KCNQ2O43526 872 aa17.92■□□□□ 0.46
VPS9D1-207ENST00000568691 SPON1Q9HCB6 807 aa17.92■□□□□ 0.46
VPS9D1-207ENST00000568691 RGL3Q3MIN7 710 aa17.9■□□□□ 0.46
VPS9D1-207ENST00000568691 IFFO2Q5TF58 517 aa17.9■□□□□ 0.46
VPS9D1-207ENST00000568691 PRR36Q9H6K5 1346 aa17.89■□□□□ 0.45
VPS9D1-207ENST00000568691 SAFB2Q14151 953 aaKnown RBP eCLIP17.88■□□□□ 0.45
VPS9D1-207ENST00000568691 PDGFDQ9GZP0 370 aaPredicted RBP17.88■□□□□ 0.45
VPS9D1-207ENST00000568691 ANKRD30BQ9BXX2 1392 aa17.88■□□□□ 0.45
VPS9D1-207ENST00000568691 ANKARQ7Z5J8 1434 aa17.88■□□□□ 0.45
VPS9D1-207ENST00000568691 PPP1R1BQ9UD71 204 aaPredicted RBP17.87■□□□□ 0.45
VPS9D1-207ENST00000568691 ACIN1Q9UKV3 1341 aaKnown RBP17.87■□□□□ 0.45
VPS9D1-207ENST00000568691 CHRNA2Q15822 529 aa17.86■□□□□ 0.45
VPS9D1-207ENST00000568691 PRAM1Q96QH2 718 aa17.86■□□□□ 0.45
VPS9D1-207ENST00000568691 SLC4A1APQ9BWU0 796 aaKnown RBP17.86■□□□□ 0.45
VPS9D1-207ENST00000568691 C14orf93Q9H972 538 aaKnown RBP17.86■□□□□ 0.45
VPS9D1-207ENST00000568691 ANO8Q9HCE9 1232 aaPredicted RBP17.86■□□□□ 0.45
VPS9D1-207ENST00000568691 KIAA0232Q92628 1395 aa17.86■□□□□ 0.45
VPS9D1-207ENST00000568691 SENP3-EIF4A1A0A087X0R7 540 aa17.85■□□□□ 0.45
VPS9D1-207ENST00000568691 NBPF8Q3BBV2 869 aa17.85■□□□□ 0.45
VPS9D1-207ENST00000568691 NBPF14Q5TI25 921 aa17.85■□□□□ 0.45
VPS9D1-207ENST00000568691 PRDM11Q9NQV5 511 aa17.85■□□□□ 0.45
VPS9D1-207ENST00000568691 TRIM26Q12899 539 aaPredicted RBP17.84■□□□□ 0.45
VPS9D1-207ENST00000568691 PPARGC1BQ86YN6 1023 aaKnown RBP17.84■□□□□ 0.45
VPS9D1-207ENST00000568691 NRKQ7Z2Y5 1582 aa17.83■□□□□ 0.45
VPS9D1-207ENST00000568691 CFAP70Q5T0N1 1121 aa17.83■□□□□ 0.44
VPS9D1-207ENST00000568691 CASZ1Q86V15 1759 aa17.83■□□□□ 0.44
VPS9D1-207ENST00000568691 C1QTNF8P60827 252 aa17.82■□□□□ 0.44
VPS9D1-207ENST00000568691 BARGINQ6ZT62 677 aa17.82■□□□□ 0.44
VPS9D1-207ENST00000568691 STRN4Q9NRL3 753 aa17.82■□□□□ 0.44
VPS9D1-207ENST00000568691 PTGER2P43116 358 aa17.81■□□□□ 0.44
VPS9D1-207ENST00000568691 USP35Q9P2H5 1018 aa17.81■□□□□ 0.44
VPS9D1-207ENST00000568691 PTF1AQ7RTS3 328 aa17.8■□□□□ 0.44
VPS9D1-207ENST00000568691 SSH2Q76I76 1423 aa17.8■□□□□ 0.44
VPS9D1-207ENST00000568691 GPRASP1Q5JY77 1395 aa17.79■□□□□ 0.44
VPS9D1-207ENST00000568691 HIRIP3Q9BW71 556 aaPredicted RBP17.79■□□□□ 0.44
VPS9D1-207ENST00000568691 MYOM1P52179 1685 aa17.79■□□□□ 0.44
VPS9D1-207ENST00000568691 CEP350Q5VT06 3117 aa17.79■□□□□ 0.44
VPS9D1-207ENST00000568691 DLC1Q96QB1 1528 aa17.78■□□□□ 0.44
VPS9D1-207ENST00000568691 DCAF8L1A6NGE4 600 aa17.78■□□□□ 0.44
VPS9D1-207ENST00000568691 PDE3BQ13370 1112 aa17.78■□□□□ 0.44
VPS9D1-207ENST00000568691 LARP1Q6PKG0 1096 aaKnown RBP17.78■□□□□ 0.44
VPS9D1-207ENST00000568691 DHX57Q6P158 1386 aaKnown RBP17.78■□□□□ 0.44
VPS9D1-207ENST00000568691 PHRF1Q9P1Y6 1649 aaKnown RBP17.77■□□□□ 0.44
VPS9D1-207ENST00000568691 ZC3H6P61129 1189 aaKnown RBP17.77■□□□□ 0.44
VPS9D1-207ENST00000568691 PROM2Q8N271 834 aa17.77■□□□□ 0.44
VPS9D1-207ENST00000568691 PEAK1Q9H792 1746 aa17.76■□□□□ 0.43
VPS9D1-207ENST00000568691 TULP4Q9NRJ4 1543 aa17.76■□□□□ 0.43
VPS9D1-207ENST00000568691 ZBTB7AO95365 584 aa17.75■□□□□ 0.43
VPS9D1-207ENST00000568691 ADGRB1O14514 1584 aa17.74■□□□□ 0.43
VPS9D1-207ENST00000568691 PAK3O75914 559 aaPredicted RBP17.74■□□□□ 0.43
VPS9D1-207ENST00000568691 LMO7Q8WWI1 1683 aa17.74■□□□□ 0.43
VPS9D1-207ENST00000568691 NUTM2GQ5VZR2 741 aa17.73■□□□□ 0.43
VPS9D1-207ENST00000568691 TCP11L2Q8N4U5 519 aa17.73■□□□□ 0.43
VPS9D1-207ENST00000568691 SGIP1Q9BQI5 828 aa17.73■□□□□ 0.43
VPS9D1-207ENST00000568691 SYT17Q9BSW7 474 aa17.73■□□□□ 0.43
VPS9D1-207ENST00000568691 MINK1Q8N4C8 1332 aaPredicted RBP17.72■□□□□ 0.43
VPS9D1-207ENST00000568691 PLSCR1O15162 318 aa17.72■□□□□ 0.43
VPS9D1-207ENST00000568691 FHDC1Q9C0D6 1143 aaPredicted RBP17.72■□□□□ 0.43
VPS9D1-207ENST00000568691 POGKQ9P215 609 aa17.72■□□□□ 0.43
VPS9D1-207ENST00000568691 ATF5Q9Y2D1 282 aaPredicted RBP17.72■□□□□ 0.43
VPS9D1-207ENST00000568691 RGPD3A6NKT7 1758 aaPredicted RBP17.71■□□□□ 0.43
VPS9D1-207ENST00000568691 RGPD4Q7Z3J3 1758 aa17.71■□□□□ 0.43
VPS9D1-207ENST00000568691 WASLO00401 505 aaPredicted RBP17.71■□□□□ 0.43
VPS9D1-207ENST00000568691 NGDNQ8NEJ9 315 aaKnown RBP17.71■□□□□ 0.43
VPS9D1-207ENST00000568691 PARP4Q9UKK3 1724 aaKnown RBP17.7■□□□□ 0.42
VPS9D1-207ENST00000568691 ATP7BP35670 1465 aa17.69■□□□□ 0.42
VPS9D1-207ENST00000568691 EVA1CP58658 441 aa17.68■□□□□ 0.42
VPS9D1-207ENST00000568691 TRAK1Q9UPV9 953 aa17.68■□□□□ 0.42
VPS9D1-207ENST00000568691 SBF2Q86WG5 1849 aa17.67■□□□□ 0.42
VPS9D1-207ENST00000568691 CPDO75976 1380 aa17.66■□□□□ 0.42
VPS9D1-207ENST00000568691 OVOS2A0A0G2JMS6 1433 aa17.66■□□□□ 0.42
VPS9D1-207ENST00000568691 OVOS2A0A0J9YW53 1432 aa17.66■□□□□ 0.42
VPS9D1-207ENST00000568691 OVOS2Q6IE36 1432 aa17.66■□□□□ 0.42
VPS9D1-207ENST00000568691 MPHOSPH9Q99550 1183 aa17.66■□□□□ 0.42
VPS9D1-207ENST00000568691 PCGF6Q9BYE7 350 aa17.66■□□□□ 0.42
VPS9D1-207ENST00000568691 THRAP3Q9Y2W1 955 aaKnown RBP17.66■□□□□ 0.42
VPS9D1-207ENST00000568691 COL5A2P05997 1499 aaPredicted RBP17.65■□□□□ 0.42
VPS9D1-207ENST00000568691 USP19O94966 1318 aa17.65■□□□□ 0.42
VPS9D1-207ENST00000568691 LRRC37A3O60309 1634 aa17.65■□□□□ 0.42
VPS9D1-207ENST00000568691 EIF3AQ14152 1382 aaKnown RBP17.65■□□□□ 0.42
VPS9D1-207ENST00000568691 CHD4Q14839 1912 aa17.64■□□□□ 0.42
VPS9D1-207ENST00000568691 BCL11BQ9C0K0 894 aaPredicted RBP17.64■□□□□ 0.41
VPS9D1-207ENST00000568691 NUDT16Q96DE0 195 aaKnown RBP17.63■□□□□ 0.41
VPS9D1-207ENST00000568691 POLR3AO14802 1390 aaPredicted RBP17.63■□□□□ 0.41
VPS9D1-207ENST00000568691 MARCH10Q8NA82 808 aaPredicted RBP17.62■□□□□ 0.41
VPS9D1-207ENST00000568691 GOLGB1Q14789 3259 aaKnown RBP17.62■□□□□ 0.41
VPS9D1-207ENST00000568691 SLC15A2Q16348 729 aa17.61■□□□□ 0.41
VPS9D1-207ENST00000568691 TXNRD1Q16881 649 aa17.6■□□□□ 0.41
VPS9D1-207ENST00000568691 CRB1P82279 1406 aa17.6■□□□□ 0.41
VPS9D1-207ENST00000568691 BCL9O00512 1426 aa17.59■□□□□ 0.41
VPS9D1-207ENST00000568691 MAP3K5Q99683 1374 aa17.59■□□□□ 0.41
VPS9D1-207ENST00000568691 ACEP12821 1306 aa17.59■□□□□ 0.41
VPS9D1-207ENST00000568691 C11orf95C9JLR9 678 aaPredicted RBP17.59■□□□□ 0.41
VPS9D1-207ENST00000568691 MTFR1LQ9H019 292 aa17.59■□□□□ 0.41
VPS9D1-207ENST00000568691 SHANK3Q9BYB0 1731 aa17.58■□□□□ 0.4
VPS9D1-207ENST00000568691 GIGYF1O75420 1035 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms