RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 BIRC2Q13490 618 aa6.17□□□□□ -1.42
SMG1-207ENST00000563235 GOLGA6AQ9NYA3 693 aa6.17□□□□□ -1.42
SMG1-207ENST00000563235 WWC3Q9ULE0 1092 aa6.17□□□□□ -1.42
SMG1-207ENST00000563235 ERCC6L2Q5T890 1561 aa6.16□□□□□ -1.42
SMG1-207ENST00000563235 PPP1R37O75864 691 aa6.16□□□□□ -1.42
SMG1-207ENST00000563235 POTEIP0CG38 1075 aa6.16□□□□□ -1.42
SMG1-207ENST00000563235 SH3D19Q5HYK7 790 aa6.16□□□□□ -1.42
SMG1-207ENST00000563235 CCDC85AQ96PX6 553 aaPredicted RBP6.16□□□□□ -1.42
SMG1-207ENST00000563235 TSPAN18Q96SJ8 248 aa6.16□□□□□ -1.42
SMG1-207ENST00000563235 GIGYF2Q6Y7W6 1299 aaKnown RBP6.16□□□□□ -1.42
SMG1-207ENST00000563235 DMGDHQ9UI17 866 aaKnown RBP6.16□□□□□ -1.42
SMG1-207ENST00000563235 IRF6O14896 467 aa6.15□□□□□ -1.42
SMG1-207ENST00000563235 CASC1Q6TDU7 716 aa6.15□□□□□ -1.42
SMG1-207ENST00000563235 JAZF1Q86VZ6 243 aa6.15□□□□□ -1.42
SMG1-207ENST00000563235 CCER1Q8TC90 406 aaPredicted RBP6.15□□□□□ -1.42
SMG1-207ENST00000563235 PHLDB3Q6NSJ2 640 aa6.15□□□□□ -1.42
SMG1-207ENST00000563235 NCKAP5LQ9HCH0 1330 aa6.15□□□□□ -1.43
SMG1-207ENST00000563235 SMARCA2P51531 1590 aa6.15□□□□□ -1.43
SMG1-207ENST00000563235 VAMP1P23763 118 aa6.15□□□□□ -1.43
SMG1-207ENST00000563235 FMNL3Q8IVF7 1028 aa6.15□□□□□ -1.43
SMG1-207ENST00000563235 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.15□□□□□ -1.43
SMG1-207ENST00000563235 KLF15Q9UIH9 416 aa6.15□□□□□ -1.43
SMG1-207ENST00000563235 TPX2Q9ULW0 747 aaKnown RBP6.15□□□□□ -1.43
SMG1-207ENST00000563235 NESP48681 1621 aa6.15□□□□□ -1.43
SMG1-207ENST00000563235 ANKRD33BA6NCL7 494 aa6.14□□□□□ -1.43
SMG1-207ENST00000563235 PNISRQ8TF01 805 aaKnown RBP6.14□□□□□ -1.43
SMG1-207ENST00000563235 PIK3R5Q8WYR1 880 aa6.14□□□□□ -1.43
SMG1-207ENST00000563235 COL4A3BPQ9Y5P4 624 aa6.14□□□□□ -1.43
SMG1-207ENST00000563235 SCP2P22307 547 aa6.14□□□□□ -1.43
SMG1-207ENST00000563235 FECHP22830 423 aa6.14□□□□□ -1.43
SMG1-207ENST00000563235 ABL2P42684 1182 aa6.14□□□□□ -1.43
SMG1-207ENST00000563235 CNGB1Q14028 1251 aaPredicted RBP6.14□□□□□ -1.43
SMG1-207ENST00000563235 BMS1Q14692 1282 aaKnown RBP6.14□□□□□ -1.43
SMG1-207ENST00000563235 CSPP1Q1MSJ5 1256 aa6.14□□□□□ -1.43
SMG1-207ENST00000563235 MPNDQ8N594 471 aa6.14□□□□□ -1.43
SMG1-207ENST00000563235 DDX27Q96GQ7 796 aaKnown RBP6.14□□□□□ -1.43
SMG1-207ENST00000563235 HDAC5Q9UQL6 1122 aa6.14□□□□□ -1.43
SMG1-207ENST00000563235 MINK1Q8N4C8 1332 aaPredicted RBP6.14□□□□□ -1.43
SMG1-207ENST00000563235 MRC2Q9UBG0 1479 aa6.13□□□□□ -1.43
SMG1-207ENST00000563235 SENP7Q9BQF6 1050 aa6.13□□□□□ -1.43
SMG1-207ENST00000563235 CTDP1Q9Y5B0 961 aaPredicted RBP6.13□□□□□ -1.43
SMG1-207ENST00000563235 PDS5BQ9NTI5 1447 aa6.13□□□□□ -1.43
SMG1-207ENST00000563235 GTF2F1P35269 517 aaKnown RBP eCLIP6.13□□□□□ -1.43
SMG1-207ENST00000563235 HDLBPQ00341 1268 aaKnown RBP6.13□□□□□ -1.43
SMG1-207ENST00000563235 RAD51AP2Q09MP3 1159 aa6.13□□□□□ -1.43
SMG1-207ENST00000563235 GSE1Q14687 1217 aa6.13□□□□□ -1.43
SMG1-207ENST00000563235 DDX46Q7L014 1031 aaKnown RBP6.13□□□□□ -1.43
SMG1-207ENST00000563235 ZNF467Q7Z7K2 595 aaPredicted RBP6.13□□□□□ -1.43
SMG1-207ENST00000563235 MTMR14Q8NCE2 650 aa6.13□□□□□ -1.43
SMG1-207ENST00000563235 POLR3EQ9NVU0 708 aa6.13□□□□□ -1.43
SMG1-207ENST00000563235 MKRN1Q9UHC7 482 aaKnown RBP6.13□□□□□ -1.43
SMG1-207ENST00000563235 FRMD4BQ9Y2L6 1034 aa6.13□□□□□ -1.43
SMG1-207ENST00000563235 CALRP27797 417 aaKnown RBP6.12□□□□□ -1.43
SMG1-207ENST00000563235 MAP2K5Q13163 448 aa6.12□□□□□ -1.43
SMG1-207ENST00000563235 SEMA3FQ13275 785 aa6.12□□□□□ -1.43
SMG1-207ENST00000563235 SGIP1Q9BQI5 828 aa6.12□□□□□ -1.43
SMG1-207ENST00000563235 PCDH12Q9NPG4 1184 aa6.12□□□□□ -1.43
SMG1-207ENST00000563235 CUEDC1Q9NWM3 386 aaPredicted RBP6.12□□□□□ -1.43
SMG1-207ENST00000563235 HDGFL1Q5TGJ6 251 aa6.12□□□□□ -1.43
SMG1-207ENST00000563235 TTC30BQ8N4P2 665 aa6.12□□□□□ -1.43
SMG1-207ENST00000563235 ZNF512BQ96KM6 892 aaPredicted RBP6.12□□□□□ -1.43
SMG1-207ENST00000563235 DCBLD2Q96PD2 775 aa6.12□□□□□ -1.43
SMG1-207ENST00000563235 BACH2Q9BYV9 841 aa6.12□□□□□ -1.43
SMG1-207ENST00000563235 ZRANB1Q9UGI0 708 aa6.12□□□□□ -1.43
SMG1-207ENST00000563235 PRKAG2Q9UGJ0 569 aa6.12□□□□□ -1.43
SMG1-207ENST00000563235 SCYL1Q96KG9 808 aa6.12□□□□□ -1.43
SMG1-207ENST00000563235 QTRT2Q9H974 415 aaKnown RBP6.12□□□□□ -1.43
SMG1-207ENST00000563235 IBSPP21815 317 aaPredicted RBP6.11□□□□□ -1.43
SMG1-207ENST00000563235 MARSP56192 900 aaKnown RBP6.11□□□□□ -1.43
SMG1-207ENST00000563235 MAP9Q49MG5 647 aa6.11□□□□□ -1.43
SMG1-207ENST00000563235 C1orf131Q8NDD1 294 aaKnown RBP6.11□□□□□ -1.43
SMG1-207ENST00000563235 PMFBP1Q8TBY8 1022 aa6.11□□□□□ -1.43
SMG1-207ENST00000563235 IL17RAQ96F46 866 aa6.11□□□□□ -1.43
SMG1-207ENST00000563235 ZSWIM4Q9H7M6 989 aa6.11□□□□□ -1.43
SMG1-207ENST00000563235 ATP1B4Q9UN42 357 aaPredicted RBP6.11□□□□□ -1.43
SMG1-207ENST00000563235 MRPL42Q9Y6G3 142 aaKnown RBP6.11□□□□□ -1.43
SMG1-207ENST00000563235 SWAP70Q9UH65 585 aa6.11□□□□□ -1.43
SMG1-207ENST00000563235 PDZRN3Q9UPQ7 1066 aa6.11□□□□□ -1.43
SMG1-207ENST00000563235 TBC1D2BQ9UPU7 963 aa6.11□□□□□ -1.43
SMG1-207ENST00000563235 PAK3O75914 559 aaPredicted RBP6.1□□□□□ -1.43
SMG1-207ENST00000563235 TINF2Q9BSI4 451 aa6.1□□□□□ -1.43
SMG1-207ENST00000563235 INO80BQ9C086 356 aaPredicted RBP6.1□□□□□ -1.43
SMG1-207ENST00000563235 SPC25Q9HBM1 224 aa6.1□□□□□ -1.43
SMG1-207ENST00000563235 JADE2Q9NQC1 790 aa6.1□□□□□ -1.43
SMG1-207ENST00000563235 IFT57Q9NWB7 429 aa6.1□□□□□ -1.43
SMG1-207ENST00000563235 NUB1Q9Y5A7 615 aa6.1□□□□□ -1.43
SMG1-207ENST00000563235 ARAP1Q96P48 1450 aa6.1□□□□□ -1.43
SMG1-207ENST00000563235 COPB2P35606 906 aa6.1□□□□□ -1.43
SMG1-207ENST00000563235 NUBP1P53384 320 aa6.1□□□□□ -1.43
SMG1-207ENST00000563235 NBPF20Q3BBV1 942 aa6.1□□□□□ -1.43
SMG1-207ENST00000563235 MFRPQ9BY79 579 aa6.1□□□□□ -1.43
SMG1-207ENST00000563235 PPP1R12CQ9BZL4 782 aa6.1□□□□□ -1.43
SMG1-207ENST00000563235 ICE2Q659A1 982 aa6.09□□□□□ -1.43
SMG1-207ENST00000563235 FBXO33Q7Z6M2 555 aa6.09□□□□□ -1.43
SMG1-207ENST00000563235 CCAR1Q8IX12 1150 aaKnown RBP6.09□□□□□ -1.43
SMG1-207ENST00000563235 ENOX1Q8TC92 643 aaKnown RBP6.09□□□□□ -1.43
SMG1-207ENST00000563235 TMC2Q8TDI7 906 aa6.09□□□□□ -1.43
SMG1-207ENST00000563235 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.09□□□□□ -1.43
SMG1-207ENST00000563235 SFMBT1Q9UHJ3 866 aa6.09□□□□□ -1.43
SMG1-207ENST00000563235 SERPINB4P48594 390 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms