RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 FLIIQ13045 1269 aa11.53□□□□□ -0.56
KARS-203ENST00000562875 RETREG3Q86VR2 466 aa11.53□□□□□ -0.56
KARS-203ENST00000562875 TSC1Q92574 1164 aa11.53□□□□□ -0.56
KARS-203ENST00000562875 TIMELESSQ9UNS1 1208 aa11.53□□□□□ -0.56
KARS-203ENST00000562875 EFCAB5A4FU69 1503 aa11.53□□□□□ -0.56
KARS-203ENST00000562875 CFAP99D6REC4 459 aa11.52□□□□□ -0.57
KARS-203ENST00000562875 NEUROD1Q13562 356 aa11.52□□□□□ -0.57
KARS-203ENST00000562875 PRR7Q8TB68 274 aa11.52□□□□□ -0.57
KARS-203ENST00000562875 THAP11Q96EK4 314 aa11.52□□□□□ -0.57
KARS-203ENST00000562875 KIF21AQ7Z4S6 1674 aa11.52□□□□□ -0.57
KARS-203ENST00000562875 ERICH6Q7L0X2 663 aa11.51□□□□□ -0.57
KARS-203ENST00000562875 BANK1Q8NDB2 785 aa11.51□□□□□ -0.57
KARS-203ENST00000562875 USB1Q9BQ65 265 aaKnown RBP11.51□□□□□ -0.57
KARS-203ENST00000562875 CCNB3Q8WWL7 1395 aa11.51□□□□□ -0.57
KARS-203ENST00000562875 ZPR1O75312 459 aa11.5□□□□□ -0.57
KARS-203ENST00000562875 TJAP1Q5JTD0 557 aa11.5□□□□□ -0.57
KARS-203ENST00000562875 HELBQ8NG08 1087 aaPredicted RBP11.5□□□□□ -0.57
KARS-203ENST00000562875 IL21Q9HBE4 155 aa11.5□□□□□ -0.57
KARS-203ENST00000562875 TLL1O43897 1013 aa11.49□□□□□ -0.57
KARS-203ENST00000562875 MMRN1Q13201 1228 aa11.49□□□□□ -0.57
KARS-203ENST00000562875 MCM6Q14566 821 aa11.49□□□□□ -0.57
KARS-203ENST00000562875 SPSB2Q99619 263 aa11.49□□□□□ -0.57
KARS-203ENST00000562875 DHX57Q6P158 1386 aaKnown RBP11.49□□□□□ -0.57
KARS-203ENST00000562875 ZNF516Q92618 1163 aa11.48□□□□□ -0.57
KARS-203ENST00000562875 SNRKQ9NRH2 765 aa11.48□□□□□ -0.57
KARS-203ENST00000562875 CARMIL1Q5VZK9 1371 aa11.48□□□□□ -0.57
KARS-203ENST00000562875 WDR97A6NE52 1622 aa11.47□□□□□ -0.57
KARS-203ENST00000562875 FANCD2Q9BXW9 1451 aa11.47□□□□□ -0.57
KARS-203ENST00000562875 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
KARS-203ENST00000562875 CTDSPL2Q05D32 466 aa11.47□□□□□ -0.57
KARS-203ENST00000562875 PCF11O94913 1555 aaKnown RBP11.46□□□□□ -0.57
KARS-203ENST00000562875 LAMC3Q9Y6N6 1575 aa11.46□□□□□ -0.57
KARS-203ENST00000562875 LRRC9Q6ZRR7 1453 aa11.44□□□□□ -0.58
KARS-203ENST00000562875 FYCO1Q9BQS8 1478 aa11.44□□□□□ -0.58
KARS-203ENST00000562875 ADH1BP00325 375 aa11.44□□□□□ -0.58
KARS-203ENST00000562875 DESI1Q6ICB0 168 aa11.44□□□□□ -0.58
KARS-203ENST00000562875 ABCA10Q8WWZ4 1543 aa11.44□□□□□ -0.58
KARS-203ENST00000562875 IGF1RP08069 1367 aa11.43□□□□□ -0.58
KARS-203ENST00000562875 MSS51Q4VC12 460 aa11.43□□□□□ -0.58
KARS-203ENST00000562875 FAM160A2Q8N612 972 aaPredicted RBP11.43□□□□□ -0.58
KARS-203ENST00000562875 JUNDP17535 347 aa11.42□□□□□ -0.58
KARS-203ENST00000562875 KANK4Q5T7N3 995 aaPredicted RBP11.42□□□□□ -0.58
KARS-203ENST00000562875 MTMR14Q8NCE2 650 aa11.42□□□□□ -0.58
KARS-203ENST00000562875 AQRO60306 1485 aaKnown RBP eCLIP11.42□□□□□ -0.584e-6■■□□□ 13.4
KARS-203ENST00000562875 NKX2-3Q8TAU0 364 aa11.41□□□□□ -0.58
KARS-203ENST00000562875 LRRN4Q8WUT4 740 aa11.41□□□□□ -0.58
KARS-203ENST00000562875 YTHDC1Q96MU7 727 aaKnown RBP11.41□□□□□ -0.58
KARS-203ENST00000562875 PRDM9Q9NQV7 894 aa11.41□□□□□ -0.58
KARS-203ENST00000562875 TOPBP1Q92547 1522 aa11.4□□□□□ -0.58
KARS-203ENST00000562875 PER1O15534 1290 aaPredicted RBP11.4□□□□□ -0.58
KARS-203ENST00000562875 KCNC4Q03721 635 aa11.4□□□□□ -0.58
KARS-203ENST00000562875 MYT1Q01538 1121 aa11.39□□□□□ -0.59
KARS-203ENST00000562875 LYPD8Q6UX82 237 aa11.39□□□□□ -0.59
KARS-203ENST00000562875 THOC2Q8NI27 1593 aaKnown RBP11.39□□□□□ -0.59
KARS-203ENST00000562875 SETD5Q9C0A6 1442 aa11.39□□□□□ -0.59
KARS-203ENST00000562875 SLC6A16Q9GZN6 736 aa11.39□□□□□ -0.59
KARS-203ENST00000562875 HMX1Q9NP08 348 aaPredicted RBP11.39□□□□□ -0.59
KARS-203ENST00000562875 FMN1Q68DA7 1419 aa11.38□□□□□ -0.59
KARS-203ENST00000562875 DXOO77932 396 aaKnown RBP11.38□□□□□ -0.59
KARS-203ENST00000562875 ITGBL1O95965 494 aaPredicted RBP11.38□□□□□ -0.59
KARS-203ENST00000562875 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
KARS-203ENST00000562875 APBB1O00213 710 aa11.37□□□□□ -0.59
KARS-203ENST00000562875 SOCS7O14512 581 aa11.37□□□□□ -0.59
KARS-203ENST00000562875 MMP16P51512 607 aa11.37□□□□□ -0.59
KARS-203ENST00000562875 CASKIN1Q8WXD9 1431 aa11.36□□□□□ -0.59
KARS-203ENST00000562875 ABCA5Q8WWZ7 1642 aa11.36□□□□□ -0.59
KARS-203ENST00000562875 PTPRNQ16849 979 aa11.36□□□□□ -0.59
KARS-203ENST00000562875 CLUAP1Q96AJ1 413 aa11.36□□□□□ -0.59
KARS-203ENST00000562875 ZMYND15Q9H091 742 aa11.36□□□□□ -0.59
KARS-203ENST00000562875 RAB3GAP2Q9H2M9 1393 aa11.36□□□□□ -0.59
KARS-203ENST00000562875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.36□□□□□ -0.59
KARS-203ENST00000562875 POLA1P09884 1462 aaPredicted RBP11.36□□□□□ -0.59
KARS-203ENST00000562875 RAD21O60216 631 aa11.35□□□□□ -0.59
KARS-203ENST00000562875 S1PR4O95977 384 aa11.35□□□□□ -0.59
KARS-203ENST00000562875 GJD4Q96KN9 370 aaPredicted RBP11.35□□□□□ -0.59
KARS-203ENST00000562875 PBRM1Q86U86 1689 aa11.35□□□□□ -0.59
KARS-203ENST00000562875 SAMD9Q5K651 1589 aa11.34□□□□□ -0.59
KARS-203ENST00000562875 POM121Q96HA1 1249 aa11.34□□□□□ -0.59
KARS-203ENST00000562875 NUDT12Q9BQG2 462 aa11.34□□□□□ -0.59
KARS-203ENST00000562875 ITGAEP38570 1179 aa11.33□□□□□ -0.6
KARS-203ENST00000562875 NR6A1Q15406 480 aa11.33□□□□□ -0.6
KARS-203ENST00000562875 TRIM34Q9BYJ4 488 aa11.33□□□□□ -0.6
KARS-203ENST00000562875 PRM3Q9NNZ6 103 aa11.33□□□□□ -0.6
KARS-203ENST00000562875 COG6Q9Y2V7 657 aa11.33□□□□□ -0.6
KARS-203ENST00000562875 CCNYL3P0C7X3 344 aa11.32□□□□□ -0.6
KARS-203ENST00000562875 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
KARS-203ENST00000562875 GDPD2Q9HCC8 539 aa11.32□□□□□ -0.6
KARS-203ENST00000562875 MAPKBP1O60336 1514 aa11.31□□□□□ -0.6
KARS-203ENST00000562875 EHBP1L1Q8N3D4 1523 aa11.31□□□□□ -0.6
KARS-203ENST00000562875 CTHP32929 405 aa11.31□□□□□ -0.6
KARS-203ENST00000562875 CCDC24Q8N4L8 307 aa11.31□□□□□ -0.6
KARS-203ENST00000562875 MAP10Q9P2G4 905 aa11.31□□□□□ -0.6
KARS-203ENST00000562875 NDUFB9Q9Y6M9 179 aa11.31□□□□□ -0.6
KARS-203ENST00000562875 FHOD3Q2V2M9 1422 aa11.3□□□□□ -0.6
KARS-203ENST00000562875 F12P00748 615 aaPredicted RBP11.3□□□□□ -0.6
KARS-203ENST00000562875 FAM50AQ14320 339 aaKnown RBP11.3□□□□□ -0.6
KARS-203ENST00000562875 TBC1D2BQ9UPU7 963 aa11.3□□□□□ -0.6
KARS-203ENST00000562875 HECW1Q76N89 1606 aa11.3□□□□□ -0.6
KARS-203ENST00000562875 RAD54L2Q9Y4B4 1467 aa11.3□□□□□ -0.6
KARS-203ENST00000562875 LRRIQ1Q96JM4 1722 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms