RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 NUTM2FA1L443 756 aa11.25□□□□□ -0.61
APH1B-209ENST00000560716 EN1Q05925 392 aaPredicted RBP11.25□□□□□ -0.61
APH1B-209ENST00000560716 FAM98CQ17RN3 349 aaKnown RBP11.24□□□□□ -0.61
APH1B-209ENST00000560716 TMEM132EQ6IEE7 984 aa11.24□□□□□ -0.61
APH1B-209ENST00000560716 STK26Q9P289 416 aa11.24□□□□□ -0.61
APH1B-209ENST00000560716 DHX57Q6P158 1386 aaKnown RBP11.24□□□□□ -0.61
APH1B-209ENST00000560716 TULP4Q9NRJ4 1543 aa11.24□□□□□ -0.61
APH1B-209ENST00000560716 ADGRB1O14514 1584 aa11.24□□□□□ -0.61
APH1B-209ENST00000560716 HAP1P54257 671 aaPredicted RBP11.23□□□□□ -0.61
APH1B-209ENST00000560716 BTG4Q9NY30 223 aa11.23□□□□□ -0.61
APH1B-209ENST00000560716 EIF3AQ14152 1382 aaKnown RBP11.23□□□□□ -0.61
APH1B-209ENST00000560716 PARP4Q9UKK3 1724 aaKnown RBP11.23□□□□□ -0.61
APH1B-209ENST00000560716 R3HDM1Q15032 1099 aaKnown RBP11.22□□□□□ -0.61
APH1B-209ENST00000560716 FAM196AQ6ZSG2 479 aa11.22□□□□□ -0.61
APH1B-209ENST00000560716 SBF2Q86WG5 1849 aa11.22□□□□□ -0.61
APH1B-209ENST00000560716 ACIN1Q9UKV3 1341 aaKnown RBP11.22□□□□□ -0.61
APH1B-209ENST00000560716 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
APH1B-209ENST00000560716 LMO7Q8WWI1 1683 aa11.21□□□□□ -0.61
APH1B-209ENST00000560716 SPATA31A1Q5TZJ5 1347 aa11.21□□□□□ -0.61
APH1B-209ENST00000560716 EZH2Q15910 746 aaKnown RBP11.21□□□□□ -0.61
APH1B-209ENST00000560716 CASZ1Q86V15 1759 aa11.21□□□□□ -0.62
APH1B-209ENST00000560716 PEAK1Q9H792 1746 aa11.21□□□□□ -0.62
APH1B-209ENST00000560716 NINLQ9Y2I6 1382 aa11.2□□□□□ -0.62
APH1B-209ENST00000560716 BARGINQ6ZT62 677 aa11.2□□□□□ -0.62
APH1B-209ENST00000560716 ATP7BP35670 1465 aa11.19□□□□□ -0.62
APH1B-209ENST00000560716 GPRASP1Q5JY77 1395 aa11.19□□□□□ -0.62
APH1B-209ENST00000560716 HOXD11P31277 338 aaPredicted RBP11.19□□□□□ -0.62
APH1B-209ENST00000560716 TOPAZ1Q8N9V7 1692 aa11.19□□□□□ -0.62
APH1B-209ENST00000560716 CHD4Q14839 1912 aa11.18□□□□□ -0.62
APH1B-209ENST00000560716 C11orf95C9JLR9 678 aaPredicted RBP11.18□□□□□ -0.62
APH1B-209ENST00000560716 PRAM1Q96QH2 718 aa11.18□□□□□ -0.62
APH1B-209ENST00000560716 PRR36Q9H6K5 1346 aa11.17□□□□□ -0.62
APH1B-209ENST00000560716 YY1P25490 414 aa11.17□□□□□ -0.62
APH1B-209ENST00000560716 RGL3Q3MIN7 710 aa11.17□□□□□ -0.62
APH1B-209ENST00000560716 MPHOSPH9Q99550 1183 aa11.17□□□□□ -0.62
APH1B-209ENST00000560716 FOXD4L1Q9NU39 408 aa11.17□□□□□ -0.62
APH1B-209ENST00000560716 ARHGEF28Q8N1W1 1705 aaKnown RBP11.17□□□□□ -0.62
APH1B-209ENST00000560716 NRKQ7Z2Y5 1582 aa11.16□□□□□ -0.62
APH1B-209ENST00000560716 CFAP70Q5T0N1 1121 aa11.16□□□□□ -0.62
APH1B-209ENST00000560716 PMFBP1Q8TBY8 1022 aa11.16□□□□□ -0.62
APH1B-209ENST00000560716 CPDO75976 1380 aa11.16□□□□□ -0.62
APH1B-209ENST00000560716 WNK3Q9BYP7 1800 aa11.15□□□□□ -0.62
APH1B-209ENST00000560716 FAM182BQ5T319 152 aa11.15□□□□□ -0.62
APH1B-209ENST00000560716 SSH2Q76I76 1423 aa11.15□□□□□ -0.62
APH1B-209ENST00000560716 POLR3AO14802 1390 aaPredicted RBP11.15□□□□□ -0.63
APH1B-209ENST00000560716 KIAA0232Q92628 1395 aa11.15□□□□□ -0.63
APH1B-209ENST00000560716 CAMTA1Q9Y6Y1 1673 aa11.14□□□□□ -0.63
APH1B-209ENST00000560716 A0A0G2JS52 829 aa11.14□□□□□ -0.63
APH1B-209ENST00000560716 WASLO00401 505 aaPredicted RBP11.14□□□□□ -0.63
APH1B-209ENST00000560716 TRIM37O94972 964 aa11.14□□□□□ -0.63
APH1B-209ENST00000560716 APBA3O96018 575 aa11.14□□□□□ -0.63
APH1B-209ENST00000560716 MYT1Q01538 1121 aa11.14□□□□□ -0.63
APH1B-209ENST00000560716 NBPF8Q3BBV2 869 aa11.14□□□□□ -0.63
APH1B-209ENST00000560716 NBPF14Q5TI25 921 aa11.14□□□□□ -0.63
APH1B-209ENST00000560716 LMOD2Q6P5Q4 547 aa11.14□□□□□ -0.63
APH1B-209ENST00000560716 STAC3Q96MF2 364 aa11.14□□□□□ -0.63
APH1B-209ENST00000560716 PRDM11Q9NQV5 511 aa11.14□□□□□ -0.63
APH1B-209ENST00000560716 THRAP3Q9Y2W1 955 aaKnown RBP11.14□□□□□ -0.63
APH1B-209ENST00000560716 BCL9O00512 1426 aa11.13□□□□□ -0.63
APH1B-209ENST00000560716 KCNQ2O43526 872 aa11.13□□□□□ -0.63
APH1B-209ENST00000560716 SPON1Q9HCB6 807 aa11.13□□□□□ -0.63
APH1B-209ENST00000560716 PLSCR1O15162 318 aa11.12□□□□□ -0.63
APH1B-209ENST00000560716 POGKQ9P215 609 aa11.12□□□□□ -0.63
APH1B-209ENST00000560716 KIAA1210Q9ULL0 1709 aa11.11□□□□□ -0.63
APH1B-209ENST00000560716 COL18A1P39060 1754 aa11.11□□□□□ -0.63
APH1B-209ENST00000560716 USP19O94966 1318 aa11.1□□□□□ -0.63
APH1B-209ENST00000560716 LRRC37A3O60309 1634 aa11.1□□□□□ -0.63
APH1B-209ENST00000560716 BRD4O60885 1362 aaPredicted RBP11.1□□□□□ -0.63
APH1B-209ENST00000560716 AKAP12Q02952 1782 aa11.1□□□□□ -0.63
APH1B-209ENST00000560716 COL24A1Q17RW2 1714 aa11.09□□□□□ -0.63
APH1B-209ENST00000560716 MYOM1P52179 1685 aa11.09□□□□□ -0.63
APH1B-209ENST00000560716 COL5A2P05997 1499 aaPredicted RBP11.09□□□□□ -0.63
APH1B-209ENST00000560716 PDE3BQ13370 1112 aa11.09□□□□□ -0.63
APH1B-209ENST00000560716 TCP11L2Q8N4U5 519 aa11.09□□□□□ -0.63
APH1B-209ENST00000560716 OVOS2A0A0G2JMS6 1433 aa11.09□□□□□ -0.63
APH1B-209ENST00000560716 OVOS2A0A0J9YW53 1432 aa11.09□□□□□ -0.63
APH1B-209ENST00000560716 OVOS2Q6IE36 1432 aa11.09□□□□□ -0.63
APH1B-209ENST00000560716 AATKQ6ZMQ8 1374 aa11.08□□□□□ -0.64
APH1B-209ENST00000560716 PLEKHG3A1L390 1219 aa11.08□□□□□ -0.64
APH1B-209ENST00000560716 SAFB2Q14151 953 aaKnown RBP eCLIP11.08□□□□□ -0.64
APH1B-209ENST00000560716 NGDNQ8NEJ9 315 aaKnown RBP11.08□□□□□ -0.64
APH1B-209ENST00000560716 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
APH1B-209ENST00000560716 CRB1P82279 1406 aa11.07□□□□□ -0.64
APH1B-209ENST00000560716 SLIT3O75094 1523 aa11.06□□□□□ -0.64
APH1B-209ENST00000560716 SLC4A2P04920 1241 aa11.06□□□□□ -0.64
APH1B-209ENST00000560716 CHRNA2Q15822 529 aa11.06□□□□□ -0.64
APH1B-209ENST00000560716 PPARGC1BQ86YN6 1023 aaKnown RBP11.06□□□□□ -0.64
APH1B-209ENST00000560716 NUDT16Q96DE0 195 aaKnown RBP11.06□□□□□ -0.64
APH1B-209ENST00000560716 TRAK1Q9UPV9 953 aa11.06□□□□□ -0.64
APH1B-209ENST00000560716 QSER1Q2KHR3 1735 aa11.06□□□□□ -0.64
APH1B-209ENST00000560716 MINK1Q8N4C8 1332 aaPredicted RBP11.06□□□□□ -0.64
APH1B-209ENST00000560716 MAP3K5Q99683 1374 aa11.05□□□□□ -0.64
APH1B-209ENST00000560716 PLEKHG5O94827 1062 aa11.05□□□□□ -0.64
APH1B-209ENST00000560716 PTGER2P43116 358 aa11.05□□□□□ -0.64
APH1B-209ENST00000560716 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
APH1B-209ENST00000560716 HIRIP3Q9BW71 556 aaPredicted RBP11.05□□□□□ -0.64
APH1B-209ENST00000560716 STRN4Q9NRL3 753 aa11.05□□□□□ -0.64
APH1B-209ENST00000560716 PAK3O75914 559 aaPredicted RBP11.04□□□□□ -0.64
APH1B-209ENST00000560716 EVA1CP58658 441 aa11.04□□□□□ -0.64
APH1B-209ENST00000560716 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms