RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 SAFB2Q14151 953 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMAD3-215ENST00000560424 THSD7AQ9UPZ6 1657 aa13.87□□□□□ -0.19
SMAD3-215ENST00000560424 NINLQ9Y2I6 1382 aa13.86□□□□□ -0.19
SMAD3-215ENST00000560424 PDE3BQ13370 1112 aa13.86□□□□□ -0.19
SMAD3-215ENST00000560424 SIRT1Q96EB6 747 aa13.86□□□□□ -0.19
SMAD3-215ENST00000560424 KCNQ2O43526 872 aa13.85□□□□□ -0.19
SMAD3-215ENST00000560424 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-215ENST00000560424 DHX57Q6P158 1386 aaKnown RBP13.84□□□□□ -0.19
SMAD3-215ENST00000560424 STRN4Q9NRL3 753 aa13.84□□□□□ -0.19
SMAD3-215ENST00000560424 POGKQ9P215 609 aa13.84□□□□□ -0.19
SMAD3-215ENST00000560424 PIK3C2GO75747 1445 aa13.83□□□□□ -0.2
SMAD3-215ENST00000560424 ANKARQ7Z5J8 1434 aa13.83□□□□□ -0.2
SMAD3-215ENST00000560424 RREB1Q92766 1687 aa13.83□□□□□ -0.2
SMAD3-215ENST00000560424 SENP3-EIF4A1A0A087X0R7 540 aa13.83□□□□□ -0.2
SMAD3-215ENST00000560424 PRAM1Q96QH2 718 aa13.83□□□□□ -0.2
SMAD3-215ENST00000560424 USP35Q9P2H5 1018 aa13.83□□□□□ -0.2
SMAD3-215ENST00000560424 SPATA31A1Q5TZJ5 1347 aa13.83□□□□□ -0.2
SMAD3-215ENST00000560424 NUP188Q5SRE5 1749 aa13.82□□□□□ -0.2
SMAD3-215ENST00000560424 PPARGC1BQ86YN6 1023 aaKnown RBP13.82□□□□□ -0.2
SMAD3-215ENST00000560424 EVA1CP58658 441 aa13.81□□□□□ -0.2
SMAD3-215ENST00000560424 NGDNQ8NEJ9 315 aaKnown RBP13.81□□□□□ -0.2
SMAD3-215ENST00000560424 ALS2Q96Q42 1657 aa13.81□□□□□ -0.2
SMAD3-215ENST00000560424 EIF3AQ14152 1382 aaKnown RBP13.81□□□□□ -0.2
SMAD3-215ENST00000560424 TRPM3Q9HCF6 1732 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-215ENST00000560424 ACIN1Q9UKV3 1341 aaKnown RBP13.8□□□□□ -0.2
SMAD3-215ENST00000560424 CHRNA2Q15822 529 aa13.78□□□□□ -0.2
SMAD3-215ENST00000560424 ZNF784Q8NCA9 323 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-215ENST00000560424 C14orf93Q9H972 538 aaKnown RBP13.78□□□□□ -0.2
SMAD3-215ENST00000560424 KIAA0232Q92628 1395 aa13.78□□□□□ -0.2
SMAD3-215ENST00000560424 SPATA31E1Q6ZUB1 1445 aa13.78□□□□□ -0.2
SMAD3-215ENST00000560424 CAMTA1Q9Y6Y1 1673 aa13.78□□□□□ -0.2
SMAD3-215ENST00000560424 HIRIP3Q9BW71 556 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-215ENST00000560424 C11orf95C9JLR9 678 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-215ENST00000560424 ZC3H6P61129 1189 aaKnown RBP13.76□□□□□ -0.21
SMAD3-215ENST00000560424 CFAP70Q5T0N1 1121 aa13.76□□□□□ -0.21
SMAD3-215ENST00000560424 BARGINQ6ZT62 677 aa13.76□□□□□ -0.21
SMAD3-215ENST00000560424 IFFO2Q5TF58 517 aa13.75□□□□□ -0.21
SMAD3-215ENST00000560424 CRYBG1Q9Y4K1 1723 aa13.75□□□□□ -0.21
SMAD3-215ENST00000560424 MINK1Q8N4C8 1332 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-215ENST00000560424 TCP11L2Q8N4U5 519 aa13.74□□□□□ -0.21
SMAD3-215ENST00000560424 TULP4Q9NRJ4 1543 aa13.74□□□□□ -0.21
SMAD3-215ENST00000560424 SSH2Q76I76 1423 aa13.73□□□□□ -0.21
SMAD3-215ENST00000560424 C1QTNF8P60827 252 aa13.73□□□□□ -0.21
SMAD3-215ENST00000560424 NRKQ7Z2Y5 1582 aa13.73□□□□□ -0.21
SMAD3-215ENST00000560424 DLC1Q96QB1 1528 aa13.73□□□□□ -0.21
SMAD3-215ENST00000560424 BCL11BQ9C0K0 894 aaPredicted RBP13.72□□□□□ -0.21
SMAD3-215ENST00000560424 TRAK1Q9UPV9 953 aa13.72□□□□□ -0.21
SMAD3-215ENST00000560424 THRAP3Q9Y2W1 955 aaKnown RBP13.72□□□□□ -0.21
SMAD3-215ENST00000560424 PHRF1Q9P1Y6 1649 aaKnown RBP13.72□□□□□ -0.21
SMAD3-215ENST00000560424 ZBTB7AO95365 584 aa13.71□□□□□ -0.21
SMAD3-215ENST00000560424 NUTM2GQ5VZR2 741 aa13.71□□□□□ -0.21
SMAD3-215ENST00000560424 LARP1Q6PKG0 1096 aaKnown RBP13.71□□□□□ -0.21
SMAD3-215ENST00000560424 ATP7BP35670 1465 aa13.71□□□□□ -0.21
SMAD3-215ENST00000560424 PRR36Q9H6K5 1346 aa13.7□□□□□ -0.22
SMAD3-215ENST00000560424 WASLO00401 505 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-215ENST00000560424 OVOS2A0A0G2JMS6 1433 aa13.7□□□□□ -0.22
SMAD3-215ENST00000560424 OVOS2A0A0J9YW53 1432 aa13.7□□□□□ -0.22
SMAD3-215ENST00000560424 OVOS2Q6IE36 1432 aa13.7□□□□□ -0.22
SMAD3-215ENST00000560424 PLSCR1O15162 318 aa13.69□□□□□ -0.22
SMAD3-215ENST00000560424 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
SMAD3-215ENST00000560424 ITSN1Q15811 1721 aa13.69□□□□□ -0.22
SMAD3-215ENST00000560424 UTRNP46939 3433 aa13.68□□□□□ -0.22
SMAD3-215ENST00000560424 TRIM26Q12899 539 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-215ENST00000560424 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-215ENST00000560424 MYOM1P52179 1685 aa13.68□□□□□ -0.22
SMAD3-215ENST00000560424 RGPD3A6NKT7 1758 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-215ENST00000560424 RGPD4Q7Z3J3 1758 aa13.68□□□□□ -0.22
SMAD3-215ENST00000560424 CHD4Q14839 1912 aa13.67□□□□□ -0.22
SMAD3-215ENST00000560424 FHDC1Q9C0D6 1143 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-215ENST00000560424 ANO8Q9HCE9 1232 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-215ENST00000560424 STK32BQ9NY57 414 aa13.67□□□□□ -0.22
SMAD3-215ENST00000560424 PARP4Q9UKK3 1724 aaKnown RBP13.67□□□□□ -0.22
SMAD3-215ENST00000560424 CASZ1Q86V15 1759 aa13.66□□□□□ -0.22
SMAD3-215ENST00000560424 GIGYF1O75420 1035 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-215ENST00000560424 ABTB2Q8N961 1025 aa13.66□□□□□ -0.22
SMAD3-215ENST00000560424 SYT17Q9BSW7 474 aa13.66□□□□□ -0.22
SMAD3-215ENST00000560424 ZBTB7CA1YPR0 619 aa13.65□□□□□ -0.22
SMAD3-215ENST00000560424 DDB1Q16531 1140 aa13.65□□□□□ -0.22
SMAD3-215ENST00000560424 NUDT16Q96DE0 195 aaKnown RBP13.65□□□□□ -0.22
SMAD3-215ENST00000560424 PDGFDQ9GZP0 370 aaPredicted RBP13.64□□□□□ -0.23
SMAD3-215ENST00000560424 CPDO75976 1380 aa13.63□□□□□ -0.23
SMAD3-215ENST00000560424 PTGER2P43116 358 aa13.63□□□□□ -0.23
SMAD3-215ENST00000560424 MTFR1LQ9H019 292 aa13.63□□□□□ -0.23
SMAD3-215ENST00000560424 CRB1P82279 1406 aa13.63□□□□□ -0.23
SMAD3-215ENST00000560424 GPR162Q16538 588 aa13.62□□□□□ -0.23
SMAD3-215ENST00000560424 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
SMAD3-215ENST00000560424 ADGRB1O14514 1584 aa13.62□□□□□ -0.23
SMAD3-215ENST00000560424 COL5A2P05997 1499 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-215ENST00000560424 LMO7Q8WWI1 1683 aa13.61□□□□□ -0.23
SMAD3-215ENST00000560424 TOM1L2Q6ZVM7 507 aa13.61□□□□□ -0.23
SMAD3-215ENST00000560424 SBF2Q86WG5 1849 aa13.61□□□□□ -0.23
SMAD3-215ENST00000560424 ACEP12821 1306 aa13.61□□□□□ -0.23
SMAD3-215ENST00000560424 SLC15A2Q16348 729 aa13.6□□□□□ -0.23
SMAD3-215ENST00000560424 ARXQ96QS3 562 aa13.6□□□□□ -0.23
SMAD3-215ENST00000560424 PEAK1Q9H792 1746 aa13.6□□□□□ -0.23
SMAD3-215ENST00000560424 GCP02774 474 aa13.59□□□□□ -0.23
SMAD3-215ENST00000560424 TXNRD1Q16881 649 aa13.59□□□□□ -0.23
SMAD3-215ENST00000560424 KDM2AQ9Y2K7 1162 aa13.59□□□□□ -0.23
SMAD3-215ENST00000560424 LRRC37A3O60309 1634 aa13.59□□□□□ -0.23
SMAD3-215ENST00000560424 POLR3AO14802 1390 aaPredicted RBP13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms