RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 FBXO31Q5XUX0 539 aaPredicted RBP3.97□□□□□ -1.77
GABPB1-209ENST00000559100 RETREG2Q8NC44 543 aa3.97□□□□□ -1.77
GABPB1-209ENST00000559100 ZBTB3Q9H5J0 574 aa3.97□□□□□ -1.77
GABPB1-209ENST00000559100 TMEM134Q9H6X4 195 aa3.97□□□□□ -1.77
GABPB1-209ENST00000559100 BCL2L12Q9HB09 334 aa3.97□□□□□ -1.77
GABPB1-209ENST00000559100 GOLGA2P5Q9HBQ8 144 aa3.97□□□□□ -1.77
GABPB1-209ENST00000559100 FAM198AQ9UFP1 575 aa3.97□□□□□ -1.77
GABPB1-209ENST00000559100 PCDHB15Q9Y5E8 787 aa3.97□□□□□ -1.77
GABPB1-209ENST00000559100 NDUFB9Q9Y6M9 179 aa3.97□□□□□ -1.77
GABPB1-209ENST00000559100 POM121CA8CG34 1229 aa3.96□□□□□ -1.78
GABPB1-209ENST00000559100 TRIM6-TRIM34B2RNG4 842 aa3.96□□□□□ -1.78
GABPB1-209ENST00000559100 LILRB3O75022 631 aa3.96□□□□□ -1.78
GABPB1-209ENST00000559100 HDGFP51858 240 aaKnown RBP3.96□□□□□ -1.78
GABPB1-209ENST00000559100 PDE4CQ08493 712 aa3.96□□□□□ -1.78
GABPB1-209ENST00000559100 TUSC1Q2TAM9 212 aa3.96□□□□□ -1.78
GABPB1-209ENST00000559100 HELBQ8NG08 1087 aaPredicted RBP3.96□□□□□ -1.78
GABPB1-209ENST00000559100 TRAIPQ9BWF2 469 aa3.96□□□□□ -1.78
GABPB1-209ENST00000559100 RNF40O75150 1001 aa3.95□□□□□ -1.78
GABPB1-209ENST00000559100 FDX1P10109 184 aa3.95□□□□□ -1.78
GABPB1-209ENST00000559100 RFX1P22670 979 aa3.95□□□□□ -1.78
GABPB1-209ENST00000559100 GJA5P36382 358 aa3.95□□□□□ -1.78
GABPB1-209ENST00000559100 GGCXP38435 758 aa3.95□□□□□ -1.78
GABPB1-209ENST00000559100 SLC19A1P41440 591 aa3.95□□□□□ -1.78
GABPB1-209ENST00000559100 USP46P62068 366 aa3.95□□□□□ -1.78
GABPB1-209ENST00000559100 FOXK2Q01167 660 aa3.95□□□□□ -1.78
GABPB1-209ENST00000559100 PRPF38BQ5VTL8 546 aaKnown RBP3.95□□□□□ -1.78
GABPB1-209ENST00000559100 HPS5Q9UPZ3 1129 aa3.95□□□□□ -1.78
GABPB1-209ENST00000559100 C6orf229H3BNL8 230 aa3.94□□□□□ -1.78
GABPB1-209ENST00000559100 HOXA2O43364 376 aa3.94□□□□□ -1.78
GABPB1-209ENST00000559100 PPP1R15AO75807 674 aaPredicted RBP3.94□□□□□ -1.78
GABPB1-209ENST00000559100 WASHC4Q2M389 1173 aa3.94□□□□□ -1.78
GABPB1-209ENST00000559100 PROX2Q3B8N5 592 aa3.94□□□□□ -1.78
GABPB1-209ENST00000559100 HDGFL1Q5TGJ6 251 aa3.94□□□□□ -1.78
GABPB1-209ENST00000559100 SPRYD7Q5W111 196 aa3.94□□□□□ -1.78
GABPB1-209ENST00000559100 ZNF598Q86UK7 904 aaKnown RBP3.94□□□□□ -1.78
GABPB1-209ENST00000559100 IL21Q9HBE4 155 aa3.94□□□□□ -1.78
GABPB1-209ENST00000559100 KIAA1468Q9P260 1216 aa3.94□□□□□ -1.78
GABPB1-209ENST00000559100 TSR3Q9UJK0 312 aaKnown RBP3.94□□□□□ -1.78
GABPB1-209ENST00000559100 C3orf80F5H4A9 247 aa3.93□□□□□ -1.78
GABPB1-209ENST00000559100 SOCS7O14512 581 aa3.93□□□□□ -1.78
GABPB1-209ENST00000559100 GDF9O60383 454 aa3.93□□□□□ -1.78
GABPB1-209ENST00000559100 CSB-PGBD3P0DP91 1061 aa3.93□□□□□ -1.78
GABPB1-209ENST00000559100 GCGRP47871 477 aa3.93□□□□□ -1.78
GABPB1-209ENST00000559100 GUCA2AQ02747 115 aa3.93□□□□□ -1.78
GABPB1-209ENST00000559100 CTDSPL2Q05D32 466 aa3.93□□□□□ -1.78
GABPB1-209ENST00000559100 MTMR2Q13614 643 aa3.93□□□□□ -1.78
GABPB1-209ENST00000559100 GRIPAP1Q4V328 841 aa3.93□□□□□ -1.78
GABPB1-209ENST00000559100 TMCO4Q5TGY1 634 aa3.93□□□□□ -1.78
GABPB1-209ENST00000559100 ZFRQ96KR1 1074 aaKnown RBP3.93□□□□□ -1.78
GABPB1-209ENST00000559100 GZF1Q9H116 711 aaPredicted RBP3.93□□□□□ -1.78
GABPB1-209ENST00000559100 VAC14Q08AM6 782 aa3.92□□□□□ -1.78
GABPB1-209ENST00000559100 SWT1Q5T5J6 900 aaKnown RBP3.92□□□□□ -1.78
GABPB1-209ENST00000559100 ZNF697Q5TEC3 545 aa3.92□□□□□ -1.78
GABPB1-209ENST00000559100 PNMA1Q8ND90 353 aa3.92□□□□□ -1.78
GABPB1-209ENST00000559100 PBXIP1Q96AQ6 731 aa3.92□□□□□ -1.78
GABPB1-209ENST00000559100 TRIM47Q96LD4 638 aa3.92□□□□□ -1.78
GABPB1-209ENST00000559100 MTRQ99707 1265 aa3.92□□□□□ -1.78
GABPB1-209ENST00000559100 KRTAP4-5Q9BYR2 181 aa3.92□□□□□ -1.78
GABPB1-209ENST00000559100 ARID1BQ8NFD5 2236 aaPredicted RBP3.92□□□□□ -1.78
GABPB1-209ENST00000559100 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.91□□□□□ -1.78
GABPB1-209ENST00000559100 PATL2C9JE40 543 aaKnown RBP3.91□□□□□ -1.78
GABPB1-209ENST00000559100 IRF5Q13568 498 aa3.91□□□□□ -1.78
GABPB1-209ENST00000559100 LAMC2Q13753 1193 aa3.91□□□□□ -1.78
GABPB1-209ENST00000559100 LRRN4Q8WUT4 740 aa3.91□□□□□ -1.78
GABPB1-209ENST00000559100 HLA-CQ95604 372 aa3.91□□□□□ -1.78
GABPB1-209ENST00000559100 EMID1Q96A84 441 aaPredicted RBP3.91□□□□□ -1.78
GABPB1-209ENST00000559100 GJD4Q96KN9 370 aaPredicted RBP3.91□□□□□ -1.78
GABPB1-209ENST00000559100 HMX1Q9NP08 348 aaPredicted RBP3.91□□□□□ -1.78
GABPB1-209ENST00000559100 NXF1Q9UBU9 619 aaKnown RBP3.91□□□□□ -1.78
GABPB1-209ENST00000559100 SEPT9Q9UHD8 586 aaPredicted RBP3.91□□□□□ -1.78
GABPB1-209ENST00000559100 RABGEF1Q9UJ41 708 aa3.91□□□□□ -1.78
GABPB1-209ENST00000559100 PCDHGC3Q9UN70 934 aa3.91□□□□□ -1.78
GABPB1-209ENST00000559100 COBLO75128 1261 aa3.9□□□□□ -1.79
GABPB1-209ENST00000559100 AVPP01185 164 aa3.9□□□□□ -1.79
GABPB1-209ENST00000559100 CFHP08603 1231 aa3.9□□□□□ -1.79
GABPB1-209ENST00000559100 LMOD1P29536 600 aaPredicted RBP3.9□□□□□ -1.79
GABPB1-209ENST00000559100 SEMA3FQ13275 785 aa3.9□□□□□ -1.79
GABPB1-209ENST00000559100 CTC1Q2NKJ3 1217 aa3.9□□□□□ -1.79
GABPB1-209ENST00000559100 LAPTM4BQ86VI4 370 aa3.9□□□□□ -1.79
GABPB1-209ENST00000559100 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
GABPB1-209ENST00000559100 ERBB4Q15303 1308 aa3.9□□□□□ -1.79
GABPB1-209ENST00000559100 CFAP99D6REC4 459 aa3.89□□□□□ -1.79
GABPB1-209ENST00000559100 SLC10A3P09131 477 aa3.89□□□□□ -1.79
GABPB1-209ENST00000559100 FUT2Q10981 343 aa3.89□□□□□ -1.79
GABPB1-209ENST00000559100 SLF2Q8IX21 1173 aa3.89□□□□□ -1.79
GABPB1-209ENST00000559100 NKX2-3Q8TAU0 364 aa3.89□□□□□ -1.79
GABPB1-209ENST00000559100 ZNF516Q92618 1163 aa3.89□□□□□ -1.79
GABPB1-209ENST00000559100 PPP1R12CQ9BZL4 782 aa3.89□□□□□ -1.79
GABPB1-209ENST00000559100 PALM3A6NDB9 673 aaPredicted RBP3.88□□□□□ -1.79
GABPB1-209ENST00000559100 VEGFBP49765 207 aa3.88□□□□□ -1.79
GABPB1-209ENST00000559100 NR6A1Q15406 480 aa3.88□□□□□ -1.79
GABPB1-209ENST00000559100 FAM98CQ17RN3 349 aaKnown RBP3.88□□□□□ -1.79
GABPB1-209ENST00000559100 CDCA8Q53HL2 280 aa3.88□□□□□ -1.79
GABPB1-209ENST00000559100 SAMD7Q7Z3H4 446 aa3.88□□□□□ -1.79
GABPB1-209ENST00000559100 PRR7Q8TB68 274 aa3.88□□□□□ -1.79
GABPB1-209ENST00000559100 ADAMTS19Q8TE59 1207 aa3.88□□□□□ -1.79
GABPB1-209ENST00000559100 EPS8L1Q8TE68 723 aa3.88□□□□□ -1.79
GABPB1-209ENST00000559100 SYMPKQ92797 1274 aaKnown RBP3.88□□□□□ -1.79
GABPB1-209ENST00000559100 TRIM34Q9BYJ4 488 aa3.88□□□□□ -1.79
GABPB1-209ENST00000559100 SENP2Q9HC62 589 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms