RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 EZH2Q15910 746 aaKnown RBP11.31□□□□□ -0.6
HMG20A-207ENST00000559035 NRKQ7Z2Y5 1582 aa11.31□□□□□ -0.6
HMG20A-207ENST00000559035 ACIN1Q9UKV3 1341 aaKnown RBP11.31□□□□□ -0.6
HMG20A-207ENST00000559035 RGPD3A6NKT7 1758 aaPredicted RBP11.31□□□□□ -0.6
HMG20A-207ENST00000559035 RGPD4Q7Z3J3 1758 aa11.31□□□□□ -0.6
HMG20A-207ENST00000559035 A0A0G2JS52 829 aa11.3□□□□□ -0.6
HMG20A-207ENST00000559035 MYT1Q01538 1121 aa11.3□□□□□ -0.6
HMG20A-207ENST00000559035 RGL3Q3MIN7 710 aa11.3□□□□□ -0.6
HMG20A-207ENST00000559035 PRAM1Q96QH2 718 aa11.3□□□□□ -0.6
HMG20A-207ENST00000559035 ATP7BP35670 1465 aa11.3□□□□□ -0.6
HMG20A-207ENST00000559035 SPATA31A1Q5TZJ5 1347 aa11.3□□□□□ -0.6
HMG20A-207ENST00000559035 TOPAZ1Q8N9V7 1692 aa11.3□□□□□ -0.6
HMG20A-207ENST00000559035 DHX57Q6P158 1386 aaKnown RBP11.29□□□□□ -0.6
HMG20A-207ENST00000559035 ITSN1Q15811 1721 aa11.29□□□□□ -0.6
HMG20A-207ENST00000559035 PPARGC1BQ86YN6 1023 aaKnown RBP11.29□□□□□ -0.6
HMG20A-207ENST00000559035 EIF3AQ14152 1382 aaKnown RBP11.28□□□□□ -0.6
HMG20A-207ENST00000559035 PLEKHG5O94827 1062 aa11.28□□□□□ -0.6
HMG20A-207ENST00000559035 CFAP70Q5T0N1 1121 aa11.28□□□□□ -0.6
HMG20A-207ENST00000559035 PMFBP1Q8TBY8 1022 aa11.28□□□□□ -0.6
HMG20A-207ENST00000559035 PEAK1Q9H792 1746 aa11.28□□□□□ -0.6
HMG20A-207ENST00000559035 PARP4Q9UKK3 1724 aaKnown RBP11.28□□□□□ -0.6
HMG20A-207ENST00000559035 CASZ1Q86V15 1759 aa11.28□□□□□ -0.6
HMG20A-207ENST00000559035 ARHGEF28Q8N1W1 1705 aaKnown RBP11.27□□□□□ -0.61
HMG20A-207ENST00000559035 LMOD2Q6P5Q4 547 aa11.27□□□□□ -0.61
HMG20A-207ENST00000559035 GPRASP1Q5JY77 1395 aa11.27□□□□□ -0.61
HMG20A-207ENST00000559035 KIAA0232Q92628 1395 aa11.27□□□□□ -0.61
HMG20A-207ENST00000559035 NINLQ9Y2I6 1382 aa11.27□□□□□ -0.61
HMG20A-207ENST00000559035 SSH2Q76I76 1423 aa11.26□□□□□ -0.61
HMG20A-207ENST00000559035 CAMTA1Q9Y6Y1 1673 aa11.26□□□□□ -0.61
HMG20A-207ENST00000559035 TRIM37O94972 964 aa11.25□□□□□ -0.61
HMG20A-207ENST00000559035 YY1P25490 414 aa11.25□□□□□ -0.61
HMG20A-207ENST00000559035 SAFB2Q14151 953 aaKnown RBP eCLIP11.25□□□□□ -0.61
HMG20A-207ENST00000559035 FAM196AQ6ZSG2 479 aa11.25□□□□□ -0.61
HMG20A-207ENST00000559035 MPHOSPH9Q99550 1183 aa11.25□□□□□ -0.61
HMG20A-207ENST00000559035 PRDM11Q9NQV5 511 aa11.24□□□□□ -0.61
HMG20A-207ENST00000559035 LRRC37A3O60309 1634 aa11.24□□□□□ -0.61
HMG20A-207ENST00000559035 BARGINQ6ZT62 677 aa11.23□□□□□ -0.61
HMG20A-207ENST00000559035 POLR3AO14802 1390 aaPredicted RBP11.22□□□□□ -0.61
HMG20A-207ENST00000559035 CPDO75976 1380 aa11.22□□□□□ -0.61
HMG20A-207ENST00000559035 APBA3O96018 575 aa11.22□□□□□ -0.61
HMG20A-207ENST00000559035 WNK3Q9BYP7 1800 aa11.22□□□□□ -0.61
HMG20A-207ENST00000559035 MYOM1P52179 1685 aa11.21□□□□□ -0.61
HMG20A-207ENST00000559035 USP19O94966 1318 aa11.21□□□□□ -0.61
HMG20A-207ENST00000559035 WASLO00401 505 aaPredicted RBP11.21□□□□□ -0.61
HMG20A-207ENST00000559035 HIRIP3Q9BW71 556 aaPredicted RBP11.21□□□□□ -0.61
HMG20A-207ENST00000559035 SBF2Q86WG5 1849 aa11.21□□□□□ -0.62
HMG20A-207ENST00000559035 COL5A2P05997 1499 aaPredicted RBP11.2□□□□□ -0.62
HMG20A-207ENST00000559035 MINK1Q8N4C8 1332 aaPredicted RBP11.2□□□□□ -0.62
HMG20A-207ENST00000559035 CHRNA2Q15822 529 aa11.2□□□□□ -0.62
HMG20A-207ENST00000559035 POGKQ9P215 609 aa11.2□□□□□ -0.62
HMG20A-207ENST00000559035 OVOS2A0A0G2JMS6 1433 aa11.18□□□□□ -0.62
HMG20A-207ENST00000559035 OVOS2A0A0J9YW53 1432 aa11.18□□□□□ -0.62
HMG20A-207ENST00000559035 OVOS2Q6IE36 1432 aa11.18□□□□□ -0.62
HMG20A-207ENST00000559035 SPON1Q9HCB6 807 aa11.18□□□□□ -0.62
HMG20A-207ENST00000559035 ANO8Q9HCE9 1232 aaPredicted RBP11.18□□□□□ -0.62
HMG20A-207ENST00000559035 STRN4Q9NRL3 753 aa11.18□□□□□ -0.62
HMG20A-207ENST00000559035 TRAK1Q9UPV9 953 aa11.18□□□□□ -0.62
HMG20A-207ENST00000559035 KCNQ2O43526 872 aa11.17□□□□□ -0.62
HMG20A-207ENST00000559035 NGDNQ8NEJ9 315 aaKnown RBP11.17□□□□□ -0.62
HMG20A-207ENST00000559035 SLIT3O75094 1523 aa11.17□□□□□ -0.62
HMG20A-207ENST00000559035 BCL9O00512 1426 aa11.17□□□□□ -0.62
HMG20A-207ENST00000559035 GOLGB1Q14789 3259 aaKnown RBP11.17□□□□□ -0.62
HMG20A-207ENST00000559035 ZC3H6P61129 1189 aaKnown RBP11.16□□□□□ -0.62
HMG20A-207ENST00000559035 NBPF8Q3BBV2 869 aa11.16□□□□□ -0.62
HMG20A-207ENST00000559035 NBPF14Q5TI25 921 aa11.16□□□□□ -0.62
HMG20A-207ENST00000559035 LARP1Q6PKG0 1096 aaKnown RBP11.16□□□□□ -0.62
HMG20A-207ENST00000559035 TCP11L2Q8N4U5 519 aa11.16□□□□□ -0.62
HMG20A-207ENST00000559035 CEP350Q5VT06 3117 aa11.16□□□□□ -0.62
HMG20A-207ENST00000559035 COL18A1P39060 1754 aa11.16□□□□□ -0.62
HMG20A-207ENST00000559035 PAK3O75914 559 aaPredicted RBP11.15□□□□□ -0.62
HMG20A-207ENST00000559035 THRAP3Q9Y2W1 955 aaKnown RBP11.15□□□□□ -0.62
HMG20A-207ENST00000559035 PAPPAQ13219 1627 aa11.15□□□□□ -0.62
HMG20A-207ENST00000559035 CRB1P82279 1406 aa11.15□□□□□ -0.62
HMG20A-207ENST00000559035 PDE3BQ13370 1112 aa11.14□□□□□ -0.63
HMG20A-207ENST00000559035 NUDT16Q96DE0 195 aaKnown RBP11.14□□□□□ -0.63
HMG20A-207ENST00000559035 USP35Q9P2H5 1018 aa11.14□□□□□ -0.63
HMG20A-207ENST00000559035 KIAA1210Q9ULL0 1709 aa11.14□□□□□ -0.63
HMG20A-207ENST00000559035 AKAP12Q02952 1782 aa11.13□□□□□ -0.63
HMG20A-207ENST00000559035 PLSCR1O15162 318 aa11.13□□□□□ -0.63
HMG20A-207ENST00000559035 PPP1R1BQ9UD71 204 aaPredicted RBP11.13□□□□□ -0.63
HMG20A-207ENST00000559035 AATKQ6ZMQ8 1374 aa11.13□□□□□ -0.63
HMG20A-207ENST00000559035 ACEP12821 1306 aa11.12□□□□□ -0.63
HMG20A-207ENST00000559035 PIK3C2AO00443 1686 aa11.12□□□□□ -0.63
HMG20A-207ENST00000559035 PLEKHG3A1L390 1219 aa11.12□□□□□ -0.63
HMG20A-207ENST00000559035 C11orf95C9JLR9 678 aaPredicted RBP11.12□□□□□ -0.63
HMG20A-207ENST00000559035 PTGER2P43116 358 aa11.12□□□□□ -0.63
HMG20A-207ENST00000559035 ZNF784Q8NCA9 323 aaPredicted RBP11.12□□□□□ -0.63
HMG20A-207ENST00000559035 PDGFDQ9GZP0 370 aaPredicted RBP11.12□□□□□ -0.63
HMG20A-207ENST00000559035 NUTM2GQ5VZR2 741 aa11.11□□□□□ -0.63
HMG20A-207ENST00000559035 PTF1AQ7RTS3 328 aa11.1□□□□□ -0.63
HMG20A-207ENST00000559035 BRD4O60885 1362 aaPredicted RBP11.1□□□□□ -0.63
HMG20A-207ENST00000559035 NHSQ6T4R5 1651 aa11.1□□□□□ -0.63
HMG20A-207ENST00000559035 QRICH2Q9H0J4 1663 aa11.1□□□□□ -0.63
HMG20A-207ENST00000559035 TRPM1Q7Z4N2 1603 aa11.09□□□□□ -0.63
HMG20A-207ENST00000559035 CHD4Q14839 1912 aa11.09□□□□□ -0.63
HMG20A-207ENST00000559035 MAP3K5Q99683 1374 aa11.09□□□□□ -0.63
HMG20A-207ENST00000559035 EVA1CP58658 441 aa11.09□□□□□ -0.63
HMG20A-207ENST00000559035 PROM2Q8N271 834 aa11.09□□□□□ -0.63
HMG20A-207ENST00000559035 SGIP1Q9BQI5 828 aa11.09□□□□□ -0.63
HMG20A-207ENST00000559035 CCDC61Q9Y6R9 512 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms