RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 FMNL1O95466 1100 aaPredicted RBP9.39□□□□□ -0.91
CPSF2-205ENST00000556622 WDR97A6NE52 1622 aa9.38□□□□□ -0.91
CPSF2-205ENST00000556622 ZBTB24O43167 697 aaPredicted RBP9.38□□□□□ -0.91
CPSF2-205ENST00000556622 MAGI1Q96QZ7 1491 aaPredicted RBP9.38□□□□□ -0.91
CPSF2-205ENST00000556622 TRIM32Q13049 653 aa9.37□□□□□ -0.91
CPSF2-205ENST00000556622 RNF19BQ6ZMZ0 732 aa9.37□□□□□ -0.91
CPSF2-205ENST00000556622 RDH13Q8NBN7 331 aa9.37□□□□□ -0.91
CPSF2-205ENST00000556622 CHD1O14646 1710 aa9.36□□□□□ -0.91
CPSF2-205ENST00000556622 TRIM66O15016 1216 aa9.36□□□□□ -0.91
CPSF2-205ENST00000556622 CYB5RLQ6IPT4 315 aa9.36□□□□□ -0.91
CPSF2-205ENST00000556622 BRICD5Q6PL45 260 aa9.36□□□□□ -0.91
CPSF2-205ENST00000556622 ZSCAN1Q8NBB4 408 aa9.36□□□□□ -0.91
CPSF2-205ENST00000556622 EEA1Q15075 1411 aa9.36□□□□□ -0.91
CPSF2-205ENST00000556622 SYNJ2O15056 1496 aa9.35□□□□□ -0.91
CPSF2-205ENST00000556622 FAM181BA6NEQ2 426 aa9.35□□□□□ -0.91
CPSF2-205ENST00000556622 ATP6V1AP38606 617 aa9.35□□□□□ -0.91
CPSF2-205ENST00000556622 VEGFBP49765 207 aa9.35□□□□□ -0.91
CPSF2-205ENST00000556622 RSPH4AQ5TD94 716 aa9.35□□□□□ -0.91
CPSF2-205ENST00000556622 SULF1Q8IWU6 871 aa9.35□□□□□ -0.91
CPSF2-205ENST00000556622 NLRP7Q8WX94 980 aa9.35□□□□□ -0.91
CPSF2-205ENST00000556622 KIFC2Q96AC6 838 aa9.35□□□□□ -0.91
CPSF2-205ENST00000556622 CLCN1P35523 988 aa9.34□□□□□ -0.91
CPSF2-205ENST00000556622 SLC24A3Q9HC58 644 aa9.34□□□□□ -0.91
CPSF2-205ENST00000556622 GPCPD1Q9NPB8 672 aa9.34□□□□□ -0.91
CPSF2-205ENST00000556622 PBRM1Q86U86 1689 aa9.34□□□□□ -0.91
CPSF2-205ENST00000556622 ABCA5Q8WWZ7 1642 aa9.34□□□□□ -0.91
CPSF2-205ENST00000556622 MSS51Q4VC12 460 aa9.33□□□□□ -0.92
CPSF2-205ENST00000556622 SLC16A10Q8TF71 515 aa9.33□□□□□ -0.92
CPSF2-205ENST00000556622 NXF1Q9UBU9 619 aaKnown RBP9.33□□□□□ -0.92
CPSF2-205ENST00000556622 KIF27Q86VH2 1401 aa9.32□□□□□ -0.92
CPSF2-205ENST00000556622 DDX11L8A8MPP1 907 aa9.32□□□□□ -0.92
CPSF2-205ENST00000556622 MDM2Q00987 491 aaPredicted RBP9.32□□□□□ -0.92
CPSF2-205ENST00000556622 SUZ12Q15022 739 aaKnown RBP9.32□□□□□ -0.92
CPSF2-205ENST00000556622 REPIN1Q9BWE0 567 aaKnown RBP9.32□□□□□ -0.92
CPSF2-205ENST00000556622 FHAD1B1AJZ9 1412 aa9.31□□□□□ -0.92
CPSF2-205ENST00000556622 CD46P15529 392 aa9.31□□□□□ -0.92
CPSF2-205ENST00000556622 FAM217BQ9NTX9 383 aaPredicted RBP9.31□□□□□ -0.92
CPSF2-205ENST00000556622 SALL2Q9Y467 1007 aaPredicted RBP9.31□□□□□ -0.92
CPSF2-205ENST00000556622 IGF1RP08069 1367 aa9.31□□□□□ -0.92
CPSF2-205ENST00000556622 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
CPSF2-205ENST00000556622 BMP1P13497 986 aa9.3□□□□□ -0.92
CPSF2-205ENST00000556622 GCGRP47871 477 aa9.3□□□□□ -0.92
CPSF2-205ENST00000556622 ERICH3Q5RHP9 1530 aa9.3□□□□□ -0.92
CPSF2-205ENST00000556622 RIMBP3CA6NJZ7 1639 aa9.28□□□□□ -0.92
CPSF2-205ENST00000556622 RIMBP3BA6NNM3 1639 aa9.28□□□□□ -0.92
CPSF2-205ENST00000556622 RIMBP3Q9UFD9 1639 aa9.28□□□□□ -0.92
CPSF2-205ENST00000556622 ARHGEF11O15085 1522 aa9.28□□□□□ -0.92
CPSF2-205ENST00000556622 SKOR1P84550 965 aa9.28□□□□□ -0.92
CPSF2-205ENST00000556622 TRIM46Q7Z4K8 759 aa9.28□□□□□ -0.92
CPSF2-205ENST00000556622 GRIN2AQ12879 1464 aa9.28□□□□□ -0.92
CPSF2-205ENST00000556622 MMP16P51512 607 aa9.27□□□□□ -0.93
CPSF2-205ENST00000556622 PDE4DQ08499 809 aa9.27□□□□□ -0.93
CPSF2-205ENST00000556622 RC3H1Q5TC82 1133 aaKnown RBP9.27□□□□□ -0.93
CPSF2-205ENST00000556622 PARP9Q8IXQ6 854 aa9.27□□□□□ -0.93
CPSF2-205ENST00000556622 IRF7Q92985 503 aa9.27□□□□□ -0.93
CPSF2-205ENST00000556622 CARMIL1Q5VZK9 1371 aa9.26□□□□□ -0.93
CPSF2-205ENST00000556622 H3BM21 787 aa9.26□□□□□ -0.93
CPSF2-205ENST00000556622 SSTR3P32745 418 aaPredicted RBP9.25□□□□□ -0.93
CPSF2-205ENST00000556622 ADAMTS12P58397 1594 aa9.24□□□□□ -0.93
CPSF2-205ENST00000556622 ALDH1A1P00352 501 aa9.24□□□□□ -0.93
CPSF2-205ENST00000556622 GIGYF2Q6Y7W6 1299 aaKnown RBP9.24□□□□□ -0.93
CPSF2-205ENST00000556622 CLASP1Q7Z460 1538 aa9.24□□□□□ -0.93
CPSF2-205ENST00000556622 NUP160Q12769 1436 aa9.22□□□□□ -0.93
CPSF2-205ENST00000556622 RUSC2Q8N2Y8 1516 aa9.22□□□□□ -0.93
CPSF2-205ENST00000556622 TTLL12Q14166 644 aaPredicted RBP9.22□□□□□ -0.93
CPSF2-205ENST00000556622 TPRNQ4KMQ1 711 aa9.22□□□□□ -0.93
CPSF2-205ENST00000556622 NPAS3Q8IXF0 933 aa9.22□□□□□ -0.93
CPSF2-205ENST00000556622 FAM9AQ8IZU1 332 aaPredicted RBP9.22□□□□□ -0.93
CPSF2-205ENST00000556622 DXOO77932 396 aaKnown RBP9.21□□□□□ -0.94
CPSF2-205ENST00000556622 USP46P62068 366 aa9.21□□□□□ -0.94
CPSF2-205ENST00000556622 CCDC24Q8N4L8 307 aa9.21□□□□□ -0.94
CPSF2-205ENST00000556622 CEP170Q5SW79 1584 aa9.2□□□□□ -0.94
CPSF2-205ENST00000556622 MS4A1P11836 297 aa9.2□□□□□ -0.94
CPSF2-205ENST00000556622 ARAP1Q96P48 1450 aa9.2□□□□□ -0.94
CPSF2-205ENST00000556622 KDM4AO75164 1064 aa9.19□□□□□ -0.94
CPSF2-205ENST00000556622 TTBK1Q5TCY1 1321 aaPredicted RBP9.19□□□□□ -0.94
CPSF2-205ENST00000556622 TNIKQ9UKE5 1360 aa9.19□□□□□ -0.94
CPSF2-205ENST00000556622 PRG4Q92954 1404 aaPredicted RBP9.19□□□□□ -0.94
CPSF2-205ENST00000556622 CUL7Q14999 1698 aa9.19□□□□□ -0.94
CPSF2-205ENST00000556622 CAPN5O15484 640 aaPredicted RBP9.18□□□□□ -0.94
CPSF2-205ENST00000556622 WNT7BP56706 349 aa9.18□□□□□ -0.94
CPSF2-205ENST00000556622 GRIPAP1Q4V328 841 aa9.18□□□□□ -0.94
CPSF2-205ENST00000556622 KIAA0586Q9BVV6 1533 aa9.17□□□□□ -0.94
CPSF2-205ENST00000556622 KCTD17Q8N5Z5 321 aa9.17□□□□□ -0.94
CPSF2-205ENST00000556622 HLA-CQ95604 372 aa9.17□□□□□ -0.94
CPSF2-205ENST00000556622 USB1Q9BQ65 265 aaKnown RBP9.17□□□□□ -0.94
CPSF2-205ENST00000556622 RAPGEF2Q9Y4G8 1499 aa9.16□□□□□ -0.94
CPSF2-205ENST00000556622 SIAH2O43255 324 aa9.16□□□□□ -0.94
CPSF2-205ENST00000556622 GJA5P36382 358 aa9.16□□□□□ -0.94
CPSF2-205ENST00000556622 GSK3AP49840 483 aa9.16□□□□□ -0.94
CPSF2-205ENST00000556622 Q3C1V9 767 aa9.16□□□□□ -0.94
CPSF2-205ENST00000556622 DIXDC1Q155Q3 683 aa9.15□□□□□ -0.94
CPSF2-205ENST00000556622 SPIRE2Q8WWL2 714 aa9.15□□□□□ -0.94
CPSF2-205ENST00000556622 BEGAINQ9BUH8 593 aa9.15□□□□□ -0.94
CPSF2-205ENST00000556622 ERCC6L2Q5T890 1561 aa9.15□□□□□ -0.95
CPSF2-205ENST00000556622 HOXA2O43364 376 aa9.14□□□□□ -0.95
CPSF2-205ENST00000556622 ZFP42Q96MM3 310 aa9.14□□□□□ -0.95
CPSF2-205ENST00000556622 KDM4CQ9H3R0 1056 aa9.13□□□□□ -0.95
CPSF2-205ENST00000556622 GOLGA3Q08378 1498 aa9.13□□□□□ -0.95
CPSF2-205ENST00000556622 SHROOM2Q13796 1616 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms