RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 CRYBG1Q9Y4K1 1723 aa17.17■□□□□ 0.34
SUPT16H-202ENST00000552829 RREB1Q92766 1687 aa17.16■□□□□ 0.34
SUPT16H-202ENST00000552829 ANKARQ7Z5J8 1434 aa17.16■□□□□ 0.34
SUPT16H-202ENST00000552829 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
SUPT16H-202ENST00000552829 C14orf93Q9H972 538 aaKnown RBP17.16■□□□□ 0.34
SUPT16H-202ENST00000552829 ADGRB2O60241 1585 aa17.15■□□□□ 0.34
SUPT16H-202ENST00000552829 NUP188Q5SRE5 1749 aa17.14■□□□□ 0.33
SUPT16H-202ENST00000552829 TRIM37O94972 964 aa17.14■□□□□ 0.33
SUPT16H-202ENST00000552829 FAM196AQ6ZSG2 479 aa17.14■□□□□ 0.33
SUPT16H-202ENST00000552829 PMFBP1Q8TBY8 1022 aa17.14■□□□□ 0.33
SUPT16H-202ENST00000552829 PPARGC1BQ86YN6 1023 aaKnown RBP17.12■□□□□ 0.33
SUPT16H-202ENST00000552829 SPATA31A1Q5TZJ5 1347 aa17.12■□□□□ 0.33
SUPT16H-202ENST00000552829 PRAM1Q96QH2 718 aa17.11■□□□□ 0.33
SUPT16H-202ENST00000552829 DHX57Q6P158 1386 aaKnown RBP17.11■□□□□ 0.33
SUPT16H-202ENST00000552829 APBA3O96018 575 aa17.1■□□□□ 0.33
SUPT16H-202ENST00000552829 DLC1Q96QB1 1528 aa17.1■□□□□ 0.33
SUPT16H-202ENST00000552829 ACIN1Q9UKV3 1341 aaKnown RBP17.09■□□□□ 0.33
SUPT16H-202ENST00000552829 GPRASP1Q5JY77 1395 aa17.08■□□□□ 0.32
SUPT16H-202ENST00000552829 NINLQ9Y2I6 1382 aa17.08■□□□□ 0.32
SUPT16H-202ENST00000552829 PRR36Q9H6K5 1346 aa17.08■□□□□ 0.32
SUPT16H-202ENST00000552829 SAFB2Q14151 953 aaKnown RBP eCLIP17.08■□□□□ 0.32
SUPT16H-202ENST00000552829 CFAP70Q5T0N1 1121 aa17.08■□□□□ 0.32
SUPT16H-202ENST00000552829 PRDM11Q9NQV5 511 aa17.08■□□□□ 0.32
SUPT16H-202ENST00000552829 KCNQ2O43526 872 aa17.06■□□□□ 0.32
SUPT16H-202ENST00000552829 SPON1Q9HCB6 807 aa17.06■□□□□ 0.32
SUPT16H-202ENST00000552829 NBPF8Q3BBV2 869 aa17.05■□□□□ 0.32
SUPT16H-202ENST00000552829 NBPF14Q5TI25 921 aa17.05■□□□□ 0.32
SUPT16H-202ENST00000552829 BARGINQ6ZT62 677 aa17.05■□□□□ 0.32
SUPT16H-202ENST00000552829 KIAA0232Q92628 1395 aa17.04■□□□□ 0.32
SUPT16H-202ENST00000552829 TULP4Q9NRJ4 1543 aa17.03■□□□□ 0.32
SUPT16H-202ENST00000552829 CAMTA1Q9Y6Y1 1673 aa17.02■□□□□ 0.32
SUPT16H-202ENST00000552829 CHRNA2Q15822 529 aa17.02■□□□□ 0.32
SUPT16H-202ENST00000552829 MPHOSPH9Q99550 1183 aa17.02■□□□□ 0.32
SUPT16H-202ENST00000552829 POGKQ9P215 609 aa17.02■□□□□ 0.32
SUPT16H-202ENST00000552829 PHRF1Q9P1Y6 1649 aaKnown RBP17.02■□□□□ 0.31
SUPT16H-202ENST00000552829 ADGRB1O14514 1584 aa17.02■□□□□ 0.31
SUPT16H-202ENST00000552829 EIF3AQ14152 1382 aaKnown RBP17.01■□□□□ 0.31
SUPT16H-202ENST00000552829 HIRIP3Q9BW71 556 aaPredicted RBP17■□□□□ 0.31
SUPT16H-202ENST00000552829 STRN4Q9NRL3 753 aa17■□□□□ 0.31
SUPT16H-202ENST00000552829 PPP1R1BQ9UD71 204 aaPredicted RBP17■□□□□ 0.31
SUPT16H-202ENST00000552829 SSH2Q76I76 1423 aa16.99■□□□□ 0.31
SUPT16H-202ENST00000552829 DCAF8L1A6NGE4 600 aa16.99■□□□□ 0.31
SUPT16H-202ENST00000552829 WASLO00401 505 aaPredicted RBP16.99■□□□□ 0.31
SUPT16H-202ENST00000552829 PDE3BQ13370 1112 aa16.99■□□□□ 0.31
SUPT16H-202ENST00000552829 CASZ1Q86V15 1759 aa16.99■□□□□ 0.31
SUPT16H-202ENST00000552829 PAK3O75914 559 aaPredicted RBP16.98■□□□□ 0.31
SUPT16H-202ENST00000552829 NGDNQ8NEJ9 315 aaKnown RBP16.98■□□□□ 0.31
SUPT16H-202ENST00000552829 MINK1Q8N4C8 1332 aaPredicted RBP16.97■□□□□ 0.31
SUPT16H-202ENST00000552829 RGPD3A6NKT7 1758 aaPredicted RBP16.97■□□□□ 0.31
SUPT16H-202ENST00000552829 RGPD4Q7Z3J3 1758 aa16.97■□□□□ 0.31
SUPT16H-202ENST00000552829 ZC3H6P61129 1189 aaKnown RBP16.97■□□□□ 0.31
SUPT16H-202ENST00000552829 SBF2Q86WG5 1849 aa16.97■□□□□ 0.31
SUPT16H-202ENST00000552829 PEAK1Q9H792 1746 aa16.96■□□□□ 0.31
SUPT16H-202ENST00000552829 LARP1Q6PKG0 1096 aaKnown RBP16.96■□□□□ 0.31
SUPT16H-202ENST00000552829 TCP11L2Q8N4U5 519 aa16.96■□□□□ 0.31
SUPT16H-202ENST00000552829 ZNF784Q8NCA9 323 aaPredicted RBP16.96■□□□□ 0.31
SUPT16H-202ENST00000552829 USP35Q9P2H5 1018 aa16.96■□□□□ 0.31
SUPT16H-202ENST00000552829 LMO7Q8WWI1 1683 aa16.96■□□□□ 0.31
SUPT16H-202ENST00000552829 PARP4Q9UKK3 1724 aaKnown RBP16.96■□□□□ 0.3
SUPT16H-202ENST00000552829 ATP7BP35670 1465 aa16.95■□□□□ 0.3
SUPT16H-202ENST00000552829 PLSCR1O15162 318 aa16.95■□□□□ 0.3
SUPT16H-202ENST00000552829 TRAK1Q9UPV9 953 aa16.95■□□□□ 0.3
SUPT16H-202ENST00000552829 ITSN1Q15811 1721 aa16.95■□□□□ 0.3
SUPT16H-202ENST00000552829 CHD4Q14839 1912 aa16.94■□□□□ 0.3
SUPT16H-202ENST00000552829 THRAP3Q9Y2W1 955 aaKnown RBP16.94■□□□□ 0.3
SUPT16H-202ENST00000552829 CPDO75976 1380 aa16.93■□□□□ 0.3
SUPT16H-202ENST00000552829 C11orf95C9JLR9 678 aaPredicted RBP16.93■□□□□ 0.3
SUPT16H-202ENST00000552829 EVA1CP58658 441 aa16.93■□□□□ 0.3
SUPT16H-202ENST00000552829 ANO8Q9HCE9 1232 aaPredicted RBP16.93■□□□□ 0.3
SUPT16H-202ENST00000552829 NRKQ7Z2Y5 1582 aa16.93■□□□□ 0.3
SUPT16H-202ENST00000552829 PTGER2P43116 358 aa16.91■□□□□ 0.3
SUPT16H-202ENST00000552829 NUDT16Q96DE0 195 aaKnown RBP16.91■□□□□ 0.3
SUPT16H-202ENST00000552829 PDGFDQ9GZP0 370 aaPredicted RBP16.91■□□□□ 0.3
SUPT16H-202ENST00000552829 POLR3AO14802 1390 aaPredicted RBP16.9■□□□□ 0.3
SUPT16H-202ENST00000552829 NUTM2GQ5VZR2 741 aa16.9■□□□□ 0.3
SUPT16H-202ENST00000552829 MYOM1P52179 1685 aa16.9■□□□□ 0.3
SUPT16H-202ENST00000552829 UTRNP46939 3433 aa16.89■□□□□ 0.29
SUPT16H-202ENST00000552829 PROM2Q8N271 834 aa16.89■□□□□ 0.29
SUPT16H-202ENST00000552829 USP19O94966 1318 aa16.89■□□□□ 0.29
SUPT16H-202ENST00000552829 OVOS2A0A0G2JMS6 1433 aa16.88■□□□□ 0.29
SUPT16H-202ENST00000552829 OVOS2A0A0J9YW53 1432 aa16.88■□□□□ 0.29
SUPT16H-202ENST00000552829 OVOS2Q6IE36 1432 aa16.88■□□□□ 0.29
SUPT16H-202ENST00000552829 COL5A2P05997 1499 aaPredicted RBP16.87■□□□□ 0.29
SUPT16H-202ENST00000552829 PTF1AQ7RTS3 328 aa16.87■□□□□ 0.29
SUPT16H-202ENST00000552829 TOPAZ1Q8N9V7 1692 aa16.87■□□□□ 0.29
SUPT16H-202ENST00000552829 ARHGEF28Q8N1W1 1705 aaKnown RBP16.87■□□□□ 0.29
SUPT16H-202ENST00000552829 PLEKHG3A1L390 1219 aa16.86■□□□□ 0.29
SUPT16H-202ENST00000552829 C1QTNF8P60827 252 aa16.86■□□□□ 0.29
SUPT16H-202ENST00000552829 BCL11BQ9C0K0 894 aaPredicted RBP16.86■□□□□ 0.29
SUPT16H-202ENST00000552829 SENP3-EIF4A1A0A087X0R7 540 aa16.85■□□□□ 0.29
SUPT16H-202ENST00000552829 NPM3O75607 178 aaKnown RBP16.85■□□□□ 0.29
SUPT16H-202ENST00000552829 ZBTB7AO95365 584 aa16.85■□□□□ 0.29
SUPT16H-202ENST00000552829 IFFO2Q5TF58 517 aa16.85■□□□□ 0.29
SUPT16H-202ENST00000552829 ACEP12821 1306 aa16.85■□□□□ 0.29
SUPT16H-202ENST00000552829 BCL9O00512 1426 aa16.85■□□□□ 0.29
SUPT16H-202ENST00000552829 SGIP1Q9BQI5 828 aa16.84■□□□□ 0.29
SUPT16H-202ENST00000552829 SYT17Q9BSW7 474 aa16.84■□□□□ 0.29
SUPT16H-202ENST00000552829 CRB1P82279 1406 aa16.84■□□□□ 0.29
SUPT16H-202ENST00000552829 LRRC37A3O60309 1634 aa16.84■□□□□ 0.29
SUPT16H-202ENST00000552829 GCP02774 474 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms