RNA–Protein interactions for RNA: ENST00000552681.1

GNPTAB-210, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best)

Gene GNPTAB, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-210ENST00000552681 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.14□□□□□ -0.63
GNPTAB-210ENST00000552681 CALRP27797 417 aaKnown RBP11.14□□□□□ -0.63
GNPTAB-210ENST00000552681 DDX27Q96GQ7 796 aaKnown RBP11.14□□□□□ -0.63
GNPTAB-210ENST00000552681 RNF39Q9H2S5 420 aa11.14□□□□□ -0.63
GNPTAB-210ENST00000552681 CASC1Q6TDU7 716 aa11.13□□□□□ -0.63
GNPTAB-210ENST00000552681 PCDH12Q9NPG4 1184 aa11.13□□□□□ -0.63
GNPTAB-210ENST00000552681 PALM3A6NDB9 673 aaPredicted RBP11.12□□□□□ -0.63
GNPTAB-210ENST00000552681 RFC5P40937 340 aa11.12□□□□□ -0.63
GNPTAB-210ENST00000552681 RAD51AP2Q09MP3 1159 aa11.12□□□□□ -0.63
GNPTAB-210ENST00000552681 NBPF11Q86T75 865 aa11.12□□□□□ -0.63
GNPTAB-210ENST00000552681 SERPINB4P48594 390 aa11.11□□□□□ -0.63
GNPTAB-210ENST00000552681 SENP7Q9BQF6 1050 aa11.11□□□□□ -0.63
GNPTAB-210ENST00000552681 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.11□□□□□ -0.63
GNPTAB-210ENST00000552681 TPX2Q9ULW0 747 aaKnown RBP11.11□□□□□ -0.63
GNPTAB-210ENST00000552681 MRPL42Q9Y6G3 142 aaKnown RBP11.11□□□□□ -0.63
GNPTAB-210ENST00000552681 ATAD2BQ9ULI0 1458 aa11.11□□□□□ -0.63
GNPTAB-210ENST00000552681 S100BP04271 92 aaPredicted RBP11.11□□□□□ -0.63
GNPTAB-210ENST00000552681 SCYL1Q96KG9 808 aa11.11□□□□□ -0.63
GNPTAB-210ENST00000552681 IFT57Q9NWB7 429 aa11.11□□□□□ -0.63
GNPTAB-210ENST00000552681 GOLGA6CA6NDK9 693 aa11.1□□□□□ -0.63
GNPTAB-210ENST00000552681 GOLGA6BA6NDN3 693 aa11.1□□□□□ -0.63
GNPTAB-210ENST00000552681 GOLGA6DP0CG33 693 aa11.1□□□□□ -0.63
GNPTAB-210ENST00000552681 TINF2Q9BSI4 451 aa11.1□□□□□ -0.63
GNPTAB-210ENST00000552681 GOLGA6AQ9NYA3 693 aa11.1□□□□□ -0.63
GNPTAB-210ENST00000552681 FILIP1Q7Z7B0 1213 aa11.1□□□□□ -0.63
GNPTAB-210ENST00000552681 ATL2Q8NHH9 583 aa11.1□□□□□ -0.63
GNPTAB-210ENST00000552681 TMC2Q8TDI7 906 aa11.1□□□□□ -0.63
GNPTAB-210ENST00000552681 TRIM34Q9BYJ4 488 aa11.1□□□□□ -0.63
GNPTAB-210ENST00000552681 SPC25Q9HBM1 224 aa11.1□□□□□ -0.63
GNPTAB-210ENST00000552681 FRMD4BQ9Y2L6 1034 aa11.1□□□□□ -0.63
GNPTAB-210ENST00000552681 NBPF1Q3BBV0 1214 aa11.09□□□□□ -0.63
GNPTAB-210ENST00000552681 FBXO33Q7Z6M2 555 aa11.09□□□□□ -0.63
GNPTAB-210ENST00000552681 JDP2Q8WYK2 163 aa11.09□□□□□ -0.63
GNPTAB-210ENST00000552681 SWAP70Q9UH65 585 aa11.09□□□□□ -0.63
GNPTAB-210ENST00000552681 SOWAHDA6NJG2 315 aa11.09□□□□□ -0.63
GNPTAB-210ENST00000552681 JADE2Q9NQC1 790 aa11.09□□□□□ -0.63
GNPTAB-210ENST00000552681 ATG7O95352 703 aa11.08□□□□□ -0.64
GNPTAB-210ENST00000552681 PYGBP11216 843 aa11.08□□□□□ -0.64
GNPTAB-210ENST00000552681 TSPAN18Q96SJ8 248 aa11.08□□□□□ -0.64
GNPTAB-210ENST00000552681 KLF15Q9UIH9 416 aa11.08□□□□□ -0.64
GNPTAB-210ENST00000552681 SMARCA4P51532 1647 aa11.08□□□□□ -0.64
GNPTAB-210ENST00000552681 ATP2B1P20020 1258 aa11.07□□□□□ -0.64
GNPTAB-210ENST00000552681 IL17RAQ96F46 866 aa11.07□□□□□ -0.64
GNPTAB-210ENST00000552681 DDX56Q9NY93 547 aaKnown RBP11.07□□□□□ -0.64
GNPTAB-210ENST00000552681 SSUH2Q9Y2M2 353 aa11.07□□□□□ -0.64
GNPTAB-210ENST00000552681 NUTM2FA1L443 756 aa11.07□□□□□ -0.64
GNPTAB-210ENST00000552681 BSDC1Q9NW68 430 aaPredicted RBP11.07□□□□□ -0.64
GNPTAB-210ENST00000552681 CTDP1Q9Y5B0 961 aaPredicted RBP11.07□□□□□ -0.64
GNPTAB-210ENST00000552681 ENOX2Q16206 610 aaKnown RBP11.06□□□□□ -0.64
GNPTAB-210ENST00000552681 CSPP1Q1MSJ5 1256 aa11.06□□□□□ -0.64
GNPTAB-210ENST00000552681 MAP9Q49MG5 647 aa11.06□□□□□ -0.64
GNPTAB-210ENST00000552681 BANK1Q8NDB2 785 aa11.06□□□□□ -0.64
GNPTAB-210ENST00000552681 BIN2Q9UBW5 565 aaPredicted RBP11.06□□□□□ -0.64
GNPTAB-210ENST00000552681 SFMBT1Q9UHJ3 866 aa11.06□□□□□ -0.64
GNPTAB-210ENST00000552681 COPB2P35606 906 aa11.06□□□□□ -0.64
GNPTAB-210ENST00000552681 CAMK2BQ13554 666 aa11.06□□□□□ -0.64
GNPTAB-210ENST00000552681 C1orf131Q8NDD1 294 aaKnown RBP11.06□□□□□ -0.64
GNPTAB-210ENST00000552681 ZNF512BQ96KM6 892 aaPredicted RBP11.06□□□□□ -0.64
GNPTAB-210ENST00000552681 LAMC3Q9Y6N6 1575 aa11.06□□□□□ -0.64
GNPTAB-210ENST00000552681 SCNN1AP37088 669 aa11.05□□□□□ -0.64
GNPTAB-210ENST00000552681 RNF187Q5TA31 235 aaPredicted RBP11.05□□□□□ -0.64
GNPTAB-210ENST00000552681 ZCRB1Q8TBF4 217 aaKnown RBP11.05□□□□□ -0.64
GNPTAB-210ENST00000552681 THOC2Q8NI27 1593 aaKnown RBP11.05□□□□□ -0.64
GNPTAB-210ENST00000552681 INO80BQ9C086 356 aaPredicted RBP11.05□□□□□ -0.64
GNPTAB-210ENST00000552681 QTRT2Q9H974 415 aaKnown RBP11.05□□□□□ -0.64
GNPTAB-210ENST00000552681 PRC1O43663 620 aa11.04□□□□□ -0.64
GNPTAB-210ENST00000552681 MFSD10Q14728 455 aa11.04□□□□□ -0.64
GNPTAB-210ENST00000552681 TFIP11Q9UBB9 837 aaKnown RBP11.04□□□□□ -0.64
GNPTAB-210ENST00000552681 MKRN1Q9UHC7 482 aaKnown RBP11.04□□□□□ -0.64
GNPTAB-210ENST00000552681 TCEAL9Q9UHQ7 104 aa11.04□□□□□ -0.64
GNPTAB-210ENST00000552681 PEG3Q9GZU2 1588 aa11.04□□□□□ -0.64
GNPTAB-210ENST00000552681 STK32AQ8WU08 396 aa11.04□□□□□ -0.64
GNPTAB-210ENST00000552681 FARP1Q9Y4F1 1045 aaPredicted RBP11.04□□□□□ -0.64
GNPTAB-210ENST00000552681 BAZ1AQ9NRL2 1556 aaPredicted RBP11.03□□□□□ -0.64
GNPTAB-210ENST00000552681 GNPATO15228 680 aa11.03□□□□□ -0.64
GNPTAB-210ENST00000552681 NT5DC4Q86YG4 428 aa11.03□□□□□ -0.64
GNPTAB-210ENST00000552681 UCN2Q96RP3 112 aa11.03□□□□□ -0.64
GNPTAB-210ENST00000552681 PAGR1Q9BTK6 254 aa11.03□□□□□ -0.64
GNPTAB-210ENST00000552681 USP5P45974 858 aa11.02□□□□□ -0.64
GNPTAB-210ENST00000552681 XPCQ01831 940 aaPredicted RBP11.02□□□□□ -0.64
GNPTAB-210ENST00000552681 TMEM164Q5U3C3 297 aa11.02□□□□□ -0.64
GNPTAB-210ENST00000552681 ICE2Q659A1 982 aa11.02□□□□□ -0.64
GNPTAB-210ENST00000552681 B4GALNT3Q6L9W6 998 aa11.02□□□□□ -0.64
GNPTAB-210ENST00000552681 ZNF746Q6NUN9 644 aaPredicted RBP11.02□□□□□ -0.64
GNPTAB-210ENST00000552681 BAZ1BQ9UIG0 1483 aaKnown RBP11.02□□□□□ -0.65
GNPTAB-210ENST00000552681 SCP2P22307 547 aa11.02□□□□□ -0.65
GNPTAB-210ENST00000552681 CNGB1Q14028 1251 aaPredicted RBP11.02□□□□□ -0.65
GNPTAB-210ENST00000552681 DHX8Q14562 1220 aaKnown RBP11.02□□□□□ -0.65
GNPTAB-210ENST00000552681 TTC30BQ8N4P2 665 aa11.02□□□□□ -0.65
GNPTAB-210ENST00000552681 MPHOSPH6Q99547 160 aaKnown RBP11.02□□□□□ -0.65
GNPTAB-210ENST00000552681 BRINP2Q9C0B6 783 aa11.02□□□□□ -0.65
GNPTAB-210ENST00000552681 NUB1Q9Y5A7 615 aa11.02□□□□□ -0.65
GNPTAB-210ENST00000552681 GIGYF1O75420 1035 aaPredicted RBP11.01□□□□□ -0.65
GNPTAB-210ENST00000552681 ZRANB2O95218 330 aaKnown RBP eCLIP11.01□□□□□ -0.65
GNPTAB-210ENST00000552681 TNNI2P48788 182 aa11.01□□□□□ -0.65
GNPTAB-210ENST00000552681 TTF2Q9UNY4 1162 aaKnown RBP11.01□□□□□ -0.65
GNPTAB-210ENST00000552681 PDZRN3Q9UPQ7 1066 aa11.01□□□□□ -0.65
GNPTAB-210ENST00000552681 LDLRAD1Q5T700 205 aa11.01□□□□□ -0.65
GNPTAB-210ENST00000552681 DDX46Q7L014 1031 aaKnown RBP11.01□□□□□ -0.65
GNPTAB-210ENST00000552681 PDILTQ8N807 584 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms