RNA–Protein interactions for RNA: ENST00000552681.1

GNPTAB-210, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best)

Gene GNPTAB, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-210ENST00000552681 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
GNPTAB-210ENST00000552681 AEBP2Q6ZN18 517 aaPredicted RBP18.85■□□□□ 0.61
GNPTAB-210ENST00000552681 SLC24A1O60721 1099 aa18.57■□□□□ 0.56
GNPTAB-210ENST00000552681 EHMT2Q96KQ7 1210 aa17.54■□□□□ 0.4
GNPTAB-210ENST00000552681 PHF23Q9BUL5 403 aaPredicted RBP17.07■□□□□ 0.32
GNPTAB-210ENST00000552681 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
GNPTAB-210ENST00000552681 RTN4Q9NQC3 1192 aaKnown RBP16.86■□□□□ 0.29
GNPTAB-210ENST00000552681 DAXXQ9UER7 740 aaPredicted RBP16.68■□□□□ 0.26
GNPTAB-210ENST00000552681 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.24
GNPTAB-210ENST00000552681 AMER1Q5JTC6 1135 aaPredicted RBP16.38■□□□□ 0.21
GNPTAB-210ENST00000552681 KCNA4P22459 653 aa16.33■□□□□ 0.2
GNPTAB-210ENST00000552681 CSRNP3Q8WYN3 585 aa16.28■□□□□ 0.2
GNPTAB-210ENST00000552681 PRKCSHP14314 528 aaPredicted RBP16.16■□□□□ 0.18
GNPTAB-210ENST00000552681 TIMELESSQ9UNS1 1208 aa15.78■□□□□ 0.12
GNPTAB-210ENST00000552681 ARXQ96QS3 562 aa15.78■□□□□ 0.12
GNPTAB-210ENST00000552681 APLP2Q06481 763 aa15.69■□□□□ 0.1
GNPTAB-210ENST00000552681 TTBK1Q5TCY1 1321 aaPredicted RBP15.62■□□□□ 0.09
GNPTAB-210ENST00000552681 TAOK2Q9UL54 1235 aa15.57■□□□□ 0.08
GNPTAB-210ENST00000552681 PELP1Q8IZL8 1130 aaKnown RBP15.56■□□□□ 0.08
GNPTAB-210ENST00000552681 TULP1O00294 542 aaPredicted RBP15.54■□□□□ 0.08
GNPTAB-210ENST00000552681 MYT1Q01538 1121 aa15.46■□□□□ 0.07
GNPTAB-210ENST00000552681 ERICH6Q7L0X2 663 aa15.46■□□□□ 0.06
GNPTAB-210ENST00000552681 SLC4A1APQ9BWU0 796 aaKnown RBP15.43■□□□□ 0.06
GNPTAB-210ENST00000552681 TPRNQ4KMQ1 711 aa15.34■□□□□ 0.05
GNPTAB-210ENST00000552681 BCANQ96GW7 911 aa15.34■□□□□ 0.05
GNPTAB-210ENST00000552681 RANGAP1P46060 587 aaPredicted RBP15.32■□□□□ 0.04
GNPTAB-210ENST00000552681 SENP3Q9H4L4 574 aaPredicted RBP15.32■□□□□ 0.04
GNPTAB-210ENST00000552681 HOMEZQ8IX15 550 aa15.31■□□□□ 0.04
GNPTAB-210ENST00000552681 ADRA2BP18089 450 aa15.18■□□□□ 0.02
GNPTAB-210ENST00000552681 PLCB2Q00722 1185 aa15.14■□□□□ 0.01
GNPTAB-210ENST00000552681 KLHL34Q8N239 644 aa15.13■□□□□ 0.01
GNPTAB-210ENST00000552681 PODXL2Q9NZ53 605 aa15.07■□□□□ 0
GNPTAB-210ENST00000552681 GTF3C3Q9Y5Q9 886 aa15.03■□□□□ -0
GNPTAB-210ENST00000552681 HAP1P54257 671 aaPredicted RBP15.02□□□□□ -0.01
GNPTAB-210ENST00000552681 ZBTB22O15209 634 aa14.92□□□□□ -0.02
GNPTAB-210ENST00000552681 PPP6R1Q9UPN7 881 aa14.86□□□□□ -0.03
GNPTAB-210ENST00000552681 EIF5BO60841 1220 aaKnown RBP14.8□□□□□ -0.04
GNPTAB-210ENST00000552681 NPM2Q86SE8 214 aaKnown RBP14.7□□□□□ -0.06
GNPTAB-210ENST00000552681 TMEM132AQ24JP5 1023 aa14.68□□□□□ -0.06
GNPTAB-210ENST00000552681 C14orf37Q86TY3 774 aa14.59□□□□□ -0.07
GNPTAB-210ENST00000552681 FKBP8Q14318 412 aa14.58□□□□□ -0.08
GNPTAB-210ENST00000552681 VSIG10Q8N0Z9 540 aa14.57□□□□□ -0.08
GNPTAB-210ENST00000552681 KDM2AQ9Y2K7 1162 aa14.52□□□□□ -0.09
GNPTAB-210ENST00000552681 FOXD1Q16676 465 aa14.46□□□□□ -0.09
GNPTAB-210ENST00000552681 TRIM26Q12899 539 aaPredicted RBP14.45□□□□□ -0.1
GNPTAB-210ENST00000552681 FBLN2P98095 1184 aa14.41□□□□□ -0.1
GNPTAB-210ENST00000552681 SUPT5HO00267 1087 aaKnown RBP14.41□□□□□ -0.1
GNPTAB-210ENST00000552681 NPM3O75607 178 aaKnown RBP14.37□□□□□ -0.11
GNPTAB-210ENST00000552681 FBXO3Q9UK99 471 aa14.37□□□□□ -0.11
GNPTAB-210ENST00000552681 PLEKHG5O94827 1062 aa14.35□□□□□ -0.11
GNPTAB-210ENST00000552681 UBTFP17480 764 aaKnown RBP14.29□□□□□ -0.12
GNPTAB-210ENST00000552681 HRCP23327 699 aa14.25□□□□□ -0.13
GNPTAB-210ENST00000552681 DCAF8L2P0C7V8 631 aa14.23□□□□□ -0.13
GNPTAB-210ENST00000552681 LOC105371045A0A1W2PR82 267 aa14.21□□□□□ -0.13
GNPTAB-210ENST00000552681 NISCHQ9Y2I1 1504 aa14.12□□□□□ -0.15
GNPTAB-210ENST00000552681 PPP4R3CPQ6ZMV5 832 aa14.04□□□□□ -0.16
GNPTAB-210ENST00000552681 FOXD4L1Q9NU39 408 aa13.94□□□□□ -0.18
GNPTAB-210ENST00000552681 NBR1Q14596 966 aa13.86□□□□□ -0.19
GNPTAB-210ENST00000552681 PAXIP1Q6ZW49 1069 aaPredicted RBP13.84□□□□□ -0.19
GNPTAB-210ENST00000552681 CFAP44Q96MT7 982 aa13.83□□□□□ -0.2
GNPTAB-210ENST00000552681 CHMP4AQ9BY43 222 aa13.78□□□□□ -0.2
GNPTAB-210ENST00000552681 TSHZ2Q9NRE2 1034 aa13.78□□□□□ -0.2
GNPTAB-210ENST00000552681 PIAS4Q8N2W9 510 aaPredicted RBP13.76□□□□□ -0.21
GNPTAB-210ENST00000552681 IGSF3O75054 1194 aa13.74□□□□□ -0.21
GNPTAB-210ENST00000552681 PDIA4P13667 645 aaKnown RBP13.73□□□□□ -0.21
GNPTAB-210ENST00000552681 CDK11BP21127 795 aaKnown RBP13.69□□□□□ -0.22
GNPTAB-210ENST00000552681 CDK11AQ9UQ88 783 aaPredicted RBP13.69□□□□□ -0.22
GNPTAB-210ENST00000552681 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.68□□□□□ -0.22
GNPTAB-210ENST00000552681 SAMD1Q6SPF0 538 aaPredicted RBP13.66□□□□□ -0.22
GNPTAB-210ENST00000552681 CCDC9Q9Y3X0 531 aaKnown RBP13.63□□□□□ -0.23
GNPTAB-210ENST00000552681 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
GNPTAB-210ENST00000552681 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
GNPTAB-210ENST00000552681 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
GNPTAB-210ENST00000552681 BBXQ8WY36 941 aaPredicted RBP13.59□□□□□ -0.23
GNPTAB-210ENST00000552681 ARID3AQ99856 593 aa13.59□□□□□ -0.23
GNPTAB-210ENST00000552681 TRHP20396 242 aaPredicted RBP13.58□□□□□ -0.24
GNPTAB-210ENST00000552681 PKD2Q13563 968 aa13.57□□□□□ -0.24
GNPTAB-210ENST00000552681 DHX37Q8IY37 1157 aaKnown RBP13.55□□□□□ -0.24
GNPTAB-210ENST00000552681 UBE2Q2Q8WVN8 375 aa13.52□□□□□ -0.25
GNPTAB-210ENST00000552681 BCL11AQ9H165 835 aa13.5□□□□□ -0.25
GNPTAB-210ENST00000552681 HSP90B1P14625 803 aaKnown RBP13.46□□□□□ -0.25
GNPTAB-210ENST00000552681 NECTIN2Q92692 538 aa13.46□□□□□ -0.26
GNPTAB-210ENST00000552681 ZBTB7CA1YPR0 619 aa13.42□□□□□ -0.26
GNPTAB-210ENST00000552681 BRPF1P55201 1214 aaPredicted RBP13.4□□□□□ -0.26
GNPTAB-210ENST00000552681 HMGB1P09429 215 aaKnown RBP13.39□□□□□ -0.27
GNPTAB-210ENST00000552681 BRD2P25440 801 aaKnown RBP13.38□□□□□ -0.27
GNPTAB-210ENST00000552681 SPRYD3Q8NCJ5 442 aa13.38□□□□□ -0.27
GNPTAB-210ENST00000552681 DNAJC5Q9H3Z4 198 aa13.37□□□□□ -0.27
GNPTAB-210ENST00000552681 C1orf115Q9H7X2 142 aa13.34□□□□□ -0.27
GNPTAB-210ENST00000552681 PDE4CQ08493 712 aa13.33□□□□□ -0.28
GNPTAB-210ENST00000552681 FAM9AQ8IZU1 332 aaPredicted RBP13.29□□□□□ -0.28
GNPTAB-210ENST00000552681 IFNLR1Q8IU57 520 aaPredicted RBP13.28□□□□□ -0.28
GNPTAB-210ENST00000552681 PUS7Q96PZ0 661 aaKnown RBP13.28□□□□□ -0.28
GNPTAB-210ENST00000552681 MAPK8IP2Q13387 824 aaPredicted RBP13.27□□□□□ -0.29
GNPTAB-210ENST00000552681 ZMYND15Q9H091 742 aa13.23□□□□□ -0.29
GNPTAB-210ENST00000552681 ZNF428Q96B54 188 aa13.21□□□□□ -0.29
GNPTAB-210ENST00000552681 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.29
GNPTAB-210ENST00000552681 POLR3GLQ9BT43 218 aa13.2□□□□□ -0.3
GNPTAB-210ENST00000552681 TAF7LQ5H9L4 462 aa13.19□□□□□ -0.3
GNPTAB-210ENST00000552681 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms