RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 HNRNPUQ00839 825 aaKnown RBP eCLIP5.93□□□□□ -1.46
CCDC59-204ENST00000550589 ERICH6BQ5W0A0 696 aa5.93□□□□□ -1.46
CCDC59-204ENST00000550589 CARD11Q9BXL7 1154 aa5.93□□□□□ -1.46
CCDC59-204ENST00000550589 PRKRIP1Q9H875 184 aaPredicted RBP5.93□□□□□ -1.46
CCDC59-204ENST00000550589 KDM6BO15054 1643 aa5.93□□□□□ -1.46
CCDC59-204ENST00000550589 KDM5DQ9BY66 1539 aa5.92□□□□□ -1.46
CCDC59-204ENST00000550589 NUTM2FA1L443 756 aa5.92□□□□□ -1.46
CCDC59-204ENST00000550589 NBPF8Q3BBV2 869 aa5.92□□□□□ -1.46
CCDC59-204ENST00000550589 ZNF326Q5BKZ1 582 aaKnown RBP5.92□□□□□ -1.46
CCDC59-204ENST00000550589 LCE2AQ5TA79 106 aaPredicted RBP5.92□□□□□ -1.46
CCDC59-204ENST00000550589 PADI6Q6TGC4 694 aa5.92□□□□□ -1.46
CCDC59-204ENST00000550589 CERKQ8TCT0 537 aa5.92□□□□□ -1.46
CCDC59-204ENST00000550589 ABCC2Q92887 1545 aa5.92□□□□□ -1.46
CCDC59-204ENST00000550589 ARHGEF12Q9NZN5 1544 aa5.92□□□□□ -1.46
CCDC59-204ENST00000550589 MBD5Q9P267 1494 aa5.92□□□□□ -1.46
CCDC59-204ENST00000550589 CCDC144AA2RUR9 1427 aa5.92□□□□□ -1.46
CCDC59-204ENST00000550589 FECHP22830 423 aa5.92□□□□□ -1.46
CCDC59-204ENST00000550589 UHRF1BP1Q6BDS2 1440 aa5.92□□□□□ -1.46
CCDC59-204ENST00000550589 SPATA31E1Q6ZUB1 1445 aa5.92□□□□□ -1.46
CCDC59-204ENST00000550589 SEPT9Q9UHD8 586 aaPredicted RBP5.92□□□□□ -1.46
CCDC59-204ENST00000550589 CROCC2H7BZ55 1655 aa5.91□□□□□ -1.46
CCDC59-204ENST00000550589 ARHGAP5Q13017 1502 aa5.91□□□□□ -1.46
CCDC59-204ENST00000550589 KTN1Q86UP2 1357 aaKnown RBP5.91□□□□□ -1.46
CCDC59-204ENST00000550589 USP47Q96K76 1375 aa5.91□□□□□ -1.46
CCDC59-204ENST00000550589 SMAPO00193 183 aa5.91□□□□□ -1.46
CCDC59-204ENST00000550589 WIPF1O43516 503 aa5.91□□□□□ -1.46
CCDC59-204ENST00000550589 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.91□□□□□ -1.46
CCDC59-204ENST00000550589 DCAF11Q8TEB1 546 aa5.91□□□□□ -1.46
CCDC59-204ENST00000550589 MRS2Q9HD23 443 aa5.91□□□□□ -1.46
CCDC59-204ENST00000550589 UHRF1BP1LA0JNW5 1464 aa5.91□□□□□ -1.46
CCDC59-204ENST00000550589 KIF7Q2M1P5 1343 aa5.91□□□□□ -1.46
CCDC59-204ENST00000550589 RBM27Q9P2N5 1060 aaKnown RBP5.9□□□□□ -1.46
CCDC59-204ENST00000550589 CDC42BPAQ5VT25 1732 aa5.9□□□□□ -1.46
CCDC59-204ENST00000550589 PLCH2O75038 1416 aa5.9□□□□□ -1.46
CCDC59-204ENST00000550589 SHROOM2Q13796 1616 aa5.9□□□□□ -1.47
CCDC59-204ENST00000550589 SMYD5Q6GMV2 418 aa5.9□□□□□ -1.47
CCDC59-204ENST00000550589 MRPL50Q8N5N7 158 aaKnown RBP5.9□□□□□ -1.47
CCDC59-204ENST00000550589 ERBINQ96RT1 1412 aa5.89□□□□□ -1.47
CCDC59-204ENST00000550589 PREX2Q70Z35 1606 aa5.89□□□□□ -1.47
CCDC59-204ENST00000550589 ITGBL1O95965 494 aaPredicted RBP5.89□□□□□ -1.47
CCDC59-204ENST00000550589 FAM161AQ3B820 660 aa5.89□□□□□ -1.47
CCDC59-204ENST00000550589 TATDN2Q93075 761 aa5.89□□□□□ -1.47
CCDC59-204ENST00000550589 MAST1Q9Y2H9 1570 aa5.89□□□□□ -1.47
CCDC59-204ENST00000550589 RALGAPBQ86X10 1494 aa5.89□□□□□ -1.47
CCDC59-204ENST00000550589 FCHSD2O94868 740 aa5.89□□□□□ -1.47
CCDC59-204ENST00000550589 RALBP1Q15311 655 aa5.89□□□□□ -1.47
CCDC59-204ENST00000550589 PACS2Q86VP3 889 aa5.89□□□□□ -1.47
CCDC59-204ENST00000550589 EYA1Q99502 592 aa5.89□□□□□ -1.47
CCDC59-204ENST00000550589 DUOX2Q9NRD8 1548 aa5.88□□□□□ -1.47
CCDC59-204ENST00000550589 RTEL1-TNFRSF6BF6WH68 1400 aa5.88□□□□□ -1.47
CCDC59-204ENST00000550589 KANK1Q14678 1352 aa5.88□□□□□ -1.47
CCDC59-204ENST00000550589 NUDT18Q6ZVK8 323 aa5.88□□□□□ -1.47
CCDC59-204ENST00000550589 LAPTM4BQ86VI4 370 aa5.88□□□□□ -1.47
CCDC59-204ENST00000550589 FAM9BQ8IZU0 186 aa5.88□□□□□ -1.47
CCDC59-204ENST00000550589 ZFRQ96KR1 1074 aaKnown RBP5.88□□□□□ -1.47
CCDC59-204ENST00000550589 POLR3GLQ9BT43 218 aa5.88□□□□□ -1.47
CCDC59-204ENST00000550589 NBPF3Q9H094 633 aa5.88□□□□□ -1.47
CCDC59-204ENST00000550589 FAM135AQ9P2D6 1515 aa5.88□□□□□ -1.47
CCDC59-204ENST00000550589 ZBED9Q6R2W3 1325 aa5.88□□□□□ -1.47
CCDC59-204ENST00000550589 WASHC2CQ9Y4E1 1318 aa5.88□□□□□ -1.47
CCDC59-204ENST00000550589 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.87□□□□□ -1.47
CCDC59-204ENST00000550589 WFS1O76024 890 aa5.87□□□□□ -1.47
CCDC59-204ENST00000550589 CDCA8Q53HL2 280 aa5.87□□□□□ -1.47
CCDC59-204ENST00000550589 TMC1Q8TDI8 760 aa5.87□□□□□ -1.47
CCDC59-204ENST00000550589 SAMD9LQ8IVG5 1584 aa5.87□□□□□ -1.47
CCDC59-204ENST00000550589 SPAG9O60271 1321 aaKnown RBP5.87□□□□□ -1.47
CCDC59-204ENST00000550589 ARAP3Q8WWN8 1544 aa5.87□□□□□ -1.47
CCDC59-204ENST00000550589 SYCP2Q9BX26 1530 aa5.87□□□□□ -1.47
CCDC59-204ENST00000550589 C11orf95C9JLR9 678 aaPredicted RBP5.87□□□□□ -1.47
CCDC59-204ENST00000550589 FAM98CQ17RN3 349 aaKnown RBP5.87□□□□□ -1.47
CCDC59-204ENST00000550589 PNMA3Q9UL41 463 aa5.87□□□□□ -1.47
CCDC59-204ENST00000550589 ADGRG1Q9Y653 693 aa5.87□□□□□ -1.47
CCDC59-204ENST00000550589 CHD1O14646 1710 aa5.87□□□□□ -1.47
CCDC59-204ENST00000550589 ST20-MTHFSA0A0A6YYL1 179 aa5.86□□□□□ -1.47
CCDC59-204ENST00000550589 HIC1Q14526 733 aa5.86□□□□□ -1.47
CCDC59-204ENST00000550589 THSD4Q6ZMP0 1018 aa5.86□□□□□ -1.47
CCDC59-204ENST00000550589 WNT2BQ93097 391 aa5.86□□□□□ -1.47
CCDC59-204ENST00000550589 ATP10AO60312 1499 aa5.86□□□□□ -1.47
CCDC59-204ENST00000550589 PLXNC1O60486 1568 aa5.86□□□□□ -1.47
CCDC59-204ENST00000550589 TMF1P82094 1093 aa5.86□□□□□ -1.47
CCDC59-204ENST00000550589 RGL3Q3MIN7 710 aa5.86□□□□□ -1.47
CCDC59-204ENST00000550589 GPIHBP1Q8IV16 184 aa5.86□□□□□ -1.47
CCDC59-204ENST00000550589 GNPATO15228 680 aa5.85□□□□□ -1.47
CCDC59-204ENST00000550589 BCAMP50895 628 aa5.85□□□□□ -1.47
CCDC59-204ENST00000550589 LMOD2Q6P5Q4 547 aa5.85□□□□□ -1.47
CCDC59-204ENST00000550589 KRTAP1-3Q8IUG1 177 aa5.85□□□□□ -1.47
CCDC59-204ENST00000550589 MYO5CQ9NQX4 1742 aa5.85□□□□□ -1.47
CCDC59-204ENST00000550589 CDC42BPBQ9Y5S2 1711 aa5.85□□□□□ -1.47
CCDC59-204ENST00000550589 CLASP1Q7Z460 1538 aa5.84□□□□□ -1.47
CCDC59-204ENST00000550589 GPRASP1Q5JY77 1395 aa5.84□□□□□ -1.47
CCDC59-204ENST00000550589 PRAG1Q86YV5 1406 aa5.84□□□□□ -1.47
CCDC59-204ENST00000550589 SOWAHBA6NEL2 793 aa5.84□□□□□ -1.47
CCDC59-204ENST00000550589 NBPF26B4DH59 902 aa5.84□□□□□ -1.47
CCDC59-204ENST00000550589 PHOX2BQ99453 314 aa5.84□□□□□ -1.47
CCDC59-204ENST00000550589 MYBBP1AQ9BQG0 1328 aaKnown RBP5.84□□□□□ -1.48
CCDC59-204ENST00000550589 BRD4O60885 1362 aaPredicted RBP5.84□□□□□ -1.48
CCDC59-204ENST00000550589 WDR7Q9Y4E6 1490 aa5.83□□□□□ -1.48
CCDC59-204ENST00000550589 UNC13BO14795 1591 aa5.83□□□□□ -1.48
CCDC59-204ENST00000550589 KDM5CP41229 1560 aa5.83□□□□□ -1.48
CCDC59-204ENST00000550589 TTC37Q6PGP7 1564 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms