RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 APBA3O96018 575 aa18.26■□□□□ 0.51
DDX54-206ENST00000549271 SLC4A1APQ9BWU0 796 aaKnown RBP18.26■□□□□ 0.51
DDX54-206ENST00000549271 NINLQ9Y2I6 1382 aa18.26■□□□□ 0.51
DDX54-206ENST00000549271 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
DDX54-206ENST00000549271 CAMTA1Q9Y6Y1 1673 aa18.25■□□□□ 0.51
DDX54-206ENST00000549271 SPATA31A1Q5TZJ5 1347 aa18.24■□□□□ 0.51
DDX54-206ENST00000549271 RGL3Q3MIN7 710 aa18.24■□□□□ 0.51
DDX54-206ENST00000549271 SPON1Q9HCB6 807 aa18.23■□□□□ 0.51
DDX54-206ENST00000549271 NBPF8Q3BBV2 869 aa18.22■□□□□ 0.51
DDX54-206ENST00000549271 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
DDX54-206ENST00000549271 DCAF8L1A6NGE4 600 aa18.21■□□□□ 0.51
DDX54-206ENST00000549271 KCNQ2O43526 872 aa18.21■□□□□ 0.51
DDX54-206ENST00000549271 PPP1R1BQ9UD71 204 aaPredicted RBP18.21■□□□□ 0.51
DDX54-206ENST00000549271 C14orf93Q9H972 538 aaKnown RBP18.2■□□□□ 0.5
DDX54-206ENST00000549271 GPRASP1Q5JY77 1395 aa18.19■□□□□ 0.5
DDX54-206ENST00000549271 DLC1Q96QB1 1528 aa18.19■□□□□ 0.5
DDX54-206ENST00000549271 PRAM1Q96QH2 718 aa18.19■□□□□ 0.5
DDX54-206ENST00000549271 PRDM11Q9NQV5 511 aa18.19■□□□□ 0.5
DDX54-206ENST00000549271 ACIN1Q9UKV3 1341 aaKnown RBP18.19■□□□□ 0.5
DDX54-206ENST00000549271 DHX57Q6P158 1386 aaKnown RBP18.18■□□□□ 0.5
DDX54-206ENST00000549271 SAFB2Q14151 953 aaKnown RBP eCLIP18.18■□□□□ 0.5
DDX54-206ENST00000549271 PHRF1Q9P1Y6 1649 aaKnown RBP18.17■□□□□ 0.5
DDX54-206ENST00000549271 UTRNP46939 3433 aa18.17■□□□□ 0.5
DDX54-206ENST00000549271 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
DDX54-206ENST00000549271 BARGINQ6ZT62 677 aa18.16■□□□□ 0.5
DDX54-206ENST00000549271 CASZ1Q86V15 1759 aa18.16■□□□□ 0.5
DDX54-206ENST00000549271 RGPD3A6NKT7 1758 aaPredicted RBP18.15■□□□□ 0.5
DDX54-206ENST00000549271 RGPD4Q7Z3J3 1758 aa18.15■□□□□ 0.5
DDX54-206ENST00000549271 ZNF784Q8NCA9 323 aaPredicted RBP18.15■□□□□ 0.5
DDX54-206ENST00000549271 PRR36Q9H6K5 1346 aa18.15■□□□□ 0.5
DDX54-206ENST00000549271 TULP4Q9NRJ4 1543 aa18.14■□□□□ 0.49
DDX54-206ENST00000549271 CFAP70Q5T0N1 1121 aa18.14■□□□□ 0.49
DDX54-206ENST00000549271 STRN4Q9NRL3 753 aa18.14■□□□□ 0.49
DDX54-206ENST00000549271 PDE3BQ13370 1112 aa18.13■□□□□ 0.49
DDX54-206ENST00000549271 CHRNA2Q15822 529 aa18.13■□□□□ 0.49
DDX54-206ENST00000549271 NRKQ7Z2Y5 1582 aa18.13■□□□□ 0.49
DDX54-206ENST00000549271 CHD4Q14839 1912 aa18.12■□□□□ 0.49
DDX54-206ENST00000549271 POGKQ9P215 609 aa18.12■□□□□ 0.49
DDX54-206ENST00000549271 EIF3AQ14152 1382 aaKnown RBP18.12■□□□□ 0.49
DDX54-206ENST00000549271 SSH2Q76I76 1423 aa18.12■□□□□ 0.49
DDX54-206ENST00000549271 MPHOSPH9Q99550 1183 aa18.11■□□□□ 0.49
DDX54-206ENST00000549271 PARP4Q9UKK3 1724 aaKnown RBP18.11■□□□□ 0.49
DDX54-206ENST00000549271 SBF2Q86WG5 1849 aa18.1■□□□□ 0.49
DDX54-206ENST00000549271 PEAK1Q9H792 1746 aa18.1■□□□□ 0.49
DDX54-206ENST00000549271 MYOM1P52179 1685 aa18.1■□□□□ 0.49
DDX54-206ENST00000549271 IFFO2Q5TF58 517 aa18.1■□□□□ 0.49
DDX54-206ENST00000549271 USP35Q9P2H5 1018 aa18.1■□□□□ 0.49
DDX54-206ENST00000549271 ADGRB1O14514 1584 aa18.09■□□□□ 0.49
DDX54-206ENST00000549271 PAK3O75914 559 aaPredicted RBP18.09■□□□□ 0.49
DDX54-206ENST00000549271 ITSN1Q15811 1721 aa18.09■□□□□ 0.49
DDX54-206ENST00000549271 LMO7Q8WWI1 1683 aa18.09■□□□□ 0.49
DDX54-206ENST00000549271 SENP3-EIF4A1A0A087X0R7 540 aa18.08■□□□□ 0.48
DDX54-206ENST00000549271 NGDNQ8NEJ9 315 aaKnown RBP18.08■□□□□ 0.48
DDX54-206ENST00000549271 HIRIP3Q9BW71 556 aaPredicted RBP18.08■□□□□ 0.48
DDX54-206ENST00000549271 ATP7BP35670 1465 aa18.07■□□□□ 0.48
DDX54-206ENST00000549271 ZC3H6P61129 1189 aaKnown RBP18.07■□□□□ 0.48
DDX54-206ENST00000549271 WASLO00401 505 aaPredicted RBP18.06■□□□□ 0.48
DDX54-206ENST00000549271 LARP1Q6PKG0 1096 aaKnown RBP18.06■□□□□ 0.48
DDX54-206ENST00000549271 TCP11L2Q8N4U5 519 aa18.06■□□□□ 0.48
DDX54-206ENST00000549271 ANO8Q9HCE9 1232 aaPredicted RBP18.06■□□□□ 0.48
DDX54-206ENST00000549271 MINK1Q8N4C8 1332 aaPredicted RBP18.05■□□□□ 0.48
DDX54-206ENST00000549271 C11orf95C9JLR9 678 aaPredicted RBP18.05■□□□□ 0.48
DDX54-206ENST00000549271 PLSCR1O15162 318 aa18.05■□□□□ 0.48
DDX54-206ENST00000549271 EVA1CP58658 441 aa18.05■□□□□ 0.48
DDX54-206ENST00000549271 C1QTNF8P60827 252 aa18.05■□□□□ 0.48
DDX54-206ENST00000549271 PTGER2P43116 358 aa18.04■□□□□ 0.48
DDX54-206ENST00000549271 PDGFDQ9GZP0 370 aaPredicted RBP18.04■□□□□ 0.48
DDX54-206ENST00000549271 THRAP3Q9Y2W1 955 aaKnown RBP18.04■□□□□ 0.48
DDX54-206ENST00000549271 OVOS2A0A0G2JMS6 1433 aa18.02■□□□□ 0.48
DDX54-206ENST00000549271 OVOS2A0A0J9YW53 1432 aa18.02■□□□□ 0.48
DDX54-206ENST00000549271 OVOS2Q6IE36 1432 aa18.02■□□□□ 0.48
DDX54-206ENST00000549271 TRAK1Q9UPV9 953 aa18.02■□□□□ 0.48
DDX54-206ENST00000549271 CEP350Q5VT06 3117 aa18.02■□□□□ 0.47
DDX54-206ENST00000549271 CPDO75976 1380 aa18.02■□□□□ 0.47
DDX54-206ENST00000549271 ZBTB7AO95365 584 aa18■□□□□ 0.47
DDX54-206ENST00000549271 NUTM2GQ5VZR2 741 aa18■□□□□ 0.47
DDX54-206ENST00000549271 LRRC37A3O60309 1634 aa18■□□□□ 0.47
DDX54-206ENST00000549271 SYT17Q9BSW7 474 aa17.99■□□□□ 0.47
DDX54-206ENST00000549271 COL5A2P05997 1499 aaPredicted RBP17.99■□□□□ 0.47
DDX54-206ENST00000549271 TOPAZ1Q8N9V7 1692 aa17.99■□□□□ 0.47
DDX54-206ENST00000549271 PROM2Q8N271 834 aa17.98■□□□□ 0.47
DDX54-206ENST00000549271 FHDC1Q9C0D6 1143 aaPredicted RBP17.98■□□□□ 0.47
DDX54-206ENST00000549271 POLR3AO14802 1390 aaPredicted RBP17.98■□□□□ 0.47
DDX54-206ENST00000549271 NUDT16Q96DE0 195 aaKnown RBP17.97■□□□□ 0.47
DDX54-206ENST00000549271 USP19O94966 1318 aa17.97■□□□□ 0.47
DDX54-206ENST00000549271 ARHGEF28Q8N1W1 1705 aaKnown RBP17.96■□□□□ 0.47
DDX54-206ENST00000549271 PTF1AQ7RTS3 328 aa17.96■□□□□ 0.47
DDX54-206ENST00000549271 BCL11BQ9C0K0 894 aaPredicted RBP17.96■□□□□ 0.47
DDX54-206ENST00000549271 ATF5Q9Y2D1 282 aaPredicted RBP17.96■□□□□ 0.47
DDX54-206ENST00000549271 CRB1P82279 1406 aa17.96■□□□□ 0.47
DDX54-206ENST00000549271 WNK3Q9BYP7 1800 aa17.95■□□□□ 0.46
DDX54-206ENST00000549271 SGIP1Q9BQI5 828 aa17.94■□□□□ 0.46
DDX54-206ENST00000549271 BCL9O00512 1426 aa17.94■□□□□ 0.46
DDX54-206ENST00000549271 AKAP12Q02952 1782 aa17.94■□□□□ 0.46
DDX54-206ENST00000549271 ACEP12821 1306 aa17.92■□□□□ 0.46
DDX54-206ENST00000549271 SLC15A2Q16348 729 aa17.91■□□□□ 0.46
DDX54-206ENST00000549271 DDB1Q16531 1140 aa17.91■□□□□ 0.46
DDX54-206ENST00000549271 ABTB2Q8N961 1025 aa17.91■□□□□ 0.46
DDX54-206ENST00000549271 MTFR1LQ9H019 292 aa17.91■□□□□ 0.46
DDX54-206ENST00000549271 MAP3K5Q99683 1374 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms