RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 SOCS7O14512 581 aa6□□□□□ -1.45
APAF1-208ENST00000549007 CCDC27Q2M243 656 aa6□□□□□ -1.45
APAF1-208ENST00000549007 BLOC1S3Q6QNY0 202 aa6□□□□□ -1.45
APAF1-208ENST00000549007 ZMIZ1Q9ULJ6 1067 aa6□□□□□ -1.45
APAF1-208ENST00000549007 USTQ9Y2C2 406 aa6□□□□□ -1.45
APAF1-208ENST00000549007 LOC105371045A0A1W2PR82 267 aa6□□□□□ -1.45
APAF1-208ENST00000549007 TMEM164Q5U3C3 297 aa6□□□□□ -1.45
APAF1-208ENST00000549007 SLF2Q8IX21 1173 aa6□□□□□ -1.45
APAF1-208ENST00000549007 LGR5O75473 907 aa5.99□□□□□ -1.45
APAF1-208ENST00000549007 MYT1LQ9UL68 1186 aa5.99□□□□□ -1.45
APAF1-208ENST00000549007 AQRO60306 1485 aaKnown RBP eCLIP5.99□□□□□ -1.45
APAF1-208ENST00000549007 BIVM-ERCC5R4GMW8 1640 aa5.99□□□□□ -1.45
APAF1-208ENST00000549007 VARS2Q5ST30 1063 aaKnown RBP5.98□□□□□ -1.45
APAF1-208ENST00000549007 RSPH4AQ5TD94 716 aa5.98□□□□□ -1.45
APAF1-208ENST00000549007 FAM9AQ8IZU1 332 aaPredicted RBP5.98□□□□□ -1.45
APAF1-208ENST00000549007 FAM174AQ8TBP5 190 aa5.98□□□□□ -1.45
APAF1-208ENST00000549007 HOXB1P14653 301 aaPredicted RBP5.98□□□□□ -1.45
APAF1-208ENST00000549007 ATP6V1AP38606 617 aa5.98□□□□□ -1.45
APAF1-208ENST00000549007 IFT140Q96RY7 1462 aa5.98□□□□□ -1.45
APAF1-208ENST00000549007 CRTC2Q53ET0 693 aaPredicted RBP5.98□□□□□ -1.45
APAF1-208ENST00000549007 RABGEF1Q9UJ41 708 aa5.98□□□□□ -1.45
APAF1-208ENST00000549007 TARBP1Q13395 1621 aaKnown RBP5.98□□□□□ -1.45
APAF1-208ENST00000549007 PSDA5PKW4 1024 aaPredicted RBP5.97□□□□□ -1.45
APAF1-208ENST00000549007 KCNA1Q09470 495 aa5.97□□□□□ -1.45
APAF1-208ENST00000549007 KCNH2Q12809 1159 aa5.97□□□□□ -1.45
APAF1-208ENST00000549007 SLAIN2Q9P270 581 aa5.97□□□□□ -1.45
APAF1-208ENST00000549007 KANK4Q5T7N3 995 aaPredicted RBP5.97□□□□□ -1.45
APAF1-208ENST00000549007 KCNH8Q96L42 1107 aa5.97□□□□□ -1.45
APAF1-208ENST00000549007 ATP9BO43861 1147 aa5.97□□□□□ -1.45
APAF1-208ENST00000549007 POTEHQ6S545 545 aa5.97□□□□□ -1.45
APAF1-208ENST00000549007 MARVELD3Q96A59 401 aa5.97□□□□□ -1.45
APAF1-208ENST00000549007 SKIP12755 728 aa5.96□□□□□ -1.45
APAF1-208ENST00000549007 FAM98CQ17RN3 349 aaKnown RBP5.96□□□□□ -1.45
APAF1-208ENST00000549007 SP7Q8TDD2 431 aaPredicted RBP5.96□□□□□ -1.45
APAF1-208ENST00000549007 SCUBE2Q9NQ36 999 aa5.96□□□□□ -1.45
APAF1-208ENST00000549007 RUSC2Q8N2Y8 1516 aa5.96□□□□□ -1.46
APAF1-208ENST00000549007 USP17L3A6NCW0 530 aa5.96□□□□□ -1.46
APAF1-208ENST00000549007 USP17L4A6NCW7 530 aa5.96□□□□□ -1.46
APAF1-208ENST00000549007 ATG7O95352 703 aa5.96□□□□□ -1.46
APAF1-208ENST00000549007 HDGFP51858 240 aaKnown RBP5.96□□□□□ -1.46
APAF1-208ENST00000549007 PHLDB3Q6NSJ2 640 aa5.96□□□□□ -1.46
APAF1-208ENST00000549007 USP17L2Q6R6M4 530 aa5.96□□□□□ -1.46
APAF1-208ENST00000549007 SND1Q7KZF4 910 aaKnown RBP eCLIP5.96□□□□□ -1.46
APAF1-208ENST00000549007 USP17L1Q7RTZ2 530 aa5.96□□□□□ -1.46
APAF1-208ENST00000549007 MORN1Q5T089 497 aa5.95□□□□□ -1.46
APAF1-208ENST00000549007 RETREG3Q86VR2 466 aa5.95□□□□□ -1.46
APAF1-208ENST00000549007 EIF4G3O43432 1585 aaKnown RBP5.95□□□□□ -1.46
APAF1-208ENST00000549007 SERPINB4P48594 390 aa5.95□□□□□ -1.46
APAF1-208ENST00000549007 ZNF594Q96JF6 807 aaPredicted RBP5.95□□□□□ -1.46
APAF1-208ENST00000549007 NOVA2Q9UNW9 492 aaKnown RBP5.95□□□□□ -1.46
APAF1-208ENST00000549007 ABCA10Q8WWZ4 1543 aa5.94□□□□□ -1.46
APAF1-208ENST00000549007 UNCXA6NJT0 531 aa5.94□□□□□ -1.46
APAF1-208ENST00000549007 NCOA4Q13772 614 aa5.94□□□□□ -1.46
APAF1-208ENST00000549007 ZFRQ96KR1 1074 aaKnown RBP5.94□□□□□ -1.46
APAF1-208ENST00000549007 USP17L5A8MUK1 530 aa5.94□□□□□ -1.46
APAF1-208ENST00000549007 CTHP32929 405 aa5.94□□□□□ -1.46
APAF1-208ENST00000549007 EIF4G2P78344 907 aaKnown RBP eCLIP5.94□□□□□ -1.46
APAF1-208ENST00000549007 TSGA10IPQ3SY00 556 aa5.94□□□□□ -1.46
APAF1-208ENST00000549007 GRIPAP1Q4V328 841 aa5.94□□□□□ -1.46
APAF1-208ENST00000549007 VPS9D1Q9Y2B5 631 aa5.94□□□□□ -1.46
APAF1-208ENST00000549007 WDR97A6NE52 1622 aa5.94□□□□□ -1.46
APAF1-208ENST00000549007 GAPVD1Q14C86 1478 aa5.93□□□□□ -1.46
APAF1-208ENST00000549007 E9PSI1 815 aa5.93□□□□□ -1.46
APAF1-208ENST00000549007 NR1H3Q13133 447 aa5.93□□□□□ -1.46
APAF1-208ENST00000549007 PRDM9Q9NQV7 894 aa5.93□□□□□ -1.46
APAF1-208ENST00000549007 ERBB3P21860 1342 aa5.93□□□□□ -1.46
APAF1-208ENST00000549007 GAS2L2Q8NHY3 880 aa5.93□□□□□ -1.46
APAF1-208ENST00000549007 ZBBXA8MT70 800 aa5.92□□□□□ -1.46
APAF1-208ENST00000549007 ARHGAP33O14559 1287 aa5.92□□□□□ -1.46
APAF1-208ENST00000549007 MKRN1Q9UHC7 482 aaKnown RBP5.92□□□□□ -1.46
APAF1-208ENST00000549007 FKBPLQ9UIM3 349 aa5.92□□□□□ -1.46
APAF1-208ENST00000549007 SNAPC4Q5SXM2 1469 aa5.92□□□□□ -1.46
APAF1-208ENST00000549007 ABCA5Q8WWZ7 1642 aa5.92□□□□□ -1.46
APAF1-208ENST00000549007 PDE4CQ08493 712 aa5.91□□□□□ -1.46
APAF1-208ENST00000549007 KIF27Q86VH2 1401 aa5.91□□□□□ -1.46
APAF1-208ENST00000549007 RASA1P20936 1047 aa5.91□□□□□ -1.46
APAF1-208ENST00000549007 LYPD8Q6UX82 237 aa5.91□□□□□ -1.46
APAF1-208ENST00000549007 OCSTAMPQ9BR26 566 aa5.91□□□□□ -1.46
APAF1-208ENST00000549007 USP17L15C9J2P7 530 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 USP17L10C9JJH3 530 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 USP17L13C9JLJ4 530 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 USP17L12C9JPN9 530 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 USP17L11C9JVI0 530 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 USP17L21D6R901 530 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 USP17L18D6R9N7 530 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 USP17L22D6RA61 530 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 USP17L17D6RBQ6 530 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 USP17L19D6RCP7 530 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 USP17L20D6RJB6 530 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 SLC4A3P48751 1232 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 BCAMP50895 628 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 USP17L24Q0WX57 530 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 USB1Q9BQ65 265 aaKnown RBP5.9□□□□□ -1.46
APAF1-208ENST00000549007 GRIN2BQ13224 1484 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 SOX11P35716 441 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 APLP1P51693 650 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 NOM1Q5C9Z4 860 aaKnown RBP5.9□□□□□ -1.46
APAF1-208ENST00000549007 ANO2Q9NQ90 1003 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 PCDHB9Q9Y5E1 797 aa5.9□□□□□ -1.46
APAF1-208ENST00000549007 KMT5BQ4FZB7 885 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms