RNA–Protein interactions for RNA: ENST00000546653.5

VDR-203, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-203ENST00000546653 NINLQ9Y2I6 1382 aa20.17■□□□□ 0.82
VDR-203ENST00000546653 SPATA31E1Q6ZUB1 1445 aa20.17■□□□□ 0.82
VDR-203ENST00000546653 SPATA31A1Q5TZJ5 1347 aa20.15■□□□□ 0.82
VDR-203ENST00000546653 ANKRD30BQ9BXX2 1392 aa20.15■□□□□ 0.82
VDR-203ENST00000546653 RGL3Q3MIN7 710 aa20.14■□□□□ 0.81
VDR-203ENST00000546653 SLC4A1APQ9BWU0 796 aaKnown RBP20.14■□□□□ 0.81
VDR-203ENST00000546653 SPON1Q9HCB6 807 aa20.14■□□□□ 0.81
VDR-203ENST00000546653 PPP1R1BQ9UD71 204 aaPredicted RBP20.14■□□□□ 0.81
VDR-203ENST00000546653 KCNQ2O43526 872 aa20.13■□□□□ 0.81
VDR-203ENST00000546653 ANKARQ7Z5J8 1434 aa20.12■□□□□ 0.81
VDR-203ENST00000546653 NBPF8Q3BBV2 869 aa20.12■□□□□ 0.81
VDR-203ENST00000546653 NBPF14Q5TI25 921 aa20.12■□□□□ 0.81
VDR-203ENST00000546653 DCAF8L1A6NGE4 600 aa20.11■□□□□ 0.81
VDR-203ENST00000546653 SAFB2Q14151 953 aaKnown RBP eCLIP20.1■□□□□ 0.81
VDR-203ENST00000546653 ZNF784Q8NCA9 323 aaPredicted RBP20.1■□□□□ 0.81
VDR-203ENST00000546653 PRDM11Q9NQV5 511 aa20.09■□□□□ 0.81
VDR-203ENST00000546653 ACIN1Q9UKV3 1341 aaKnown RBP20.08■□□□□ 0.81
VDR-203ENST00000546653 PRAM1Q96QH2 718 aa20.08■□□□□ 0.81
VDR-203ENST00000546653 C14orf93Q9H972 538 aaKnown RBP20.08■□□□□ 0.81
VDR-203ENST00000546653 GPRASP1Q5JY77 1395 aa20.07■□□□□ 0.8
VDR-203ENST00000546653 CASZ1Q86V15 1759 aa20.06■□□□□ 0.8
VDR-203ENST00000546653 CEP350Q5VT06 3117 aa20.06■□□□□ 0.8
VDR-203ENST00000546653 KIAA0232Q92628 1395 aa20.06■□□□□ 0.8
VDR-203ENST00000546653 PRR36Q9H6K5 1346 aa20.05■□□□□ 0.8
VDR-203ENST00000546653 CHRNA2Q15822 529 aa20.05■□□□□ 0.8
VDR-203ENST00000546653 IFFO2Q5TF58 517 aa20.05■□□□□ 0.8
VDR-203ENST00000546653 PPARGC1BQ86YN6 1023 aaKnown RBP20.05■□□□□ 0.8
VDR-203ENST00000546653 STRN4Q9NRL3 753 aa20.05■□□□□ 0.8
VDR-203ENST00000546653 PHRF1Q9P1Y6 1649 aaKnown RBP20.05■□□□□ 0.8
VDR-203ENST00000546653 NRKQ7Z2Y5 1582 aa20.04■□□□□ 0.8
VDR-203ENST00000546653 SENP3-EIF4A1A0A087X0R7 540 aa20.04■□□□□ 0.8
VDR-203ENST00000546653 DHX57Q6P158 1386 aaKnown RBP20.04■□□□□ 0.8
VDR-203ENST00000546653 DLC1Q96QB1 1528 aa20.03■□□□□ 0.8
VDR-203ENST00000546653 PDE3BQ13370 1112 aa20.03■□□□□ 0.8
VDR-203ENST00000546653 CFAP70Q5T0N1 1121 aa20.03■□□□□ 0.8
VDR-203ENST00000546653 BARGINQ6ZT62 677 aa20.03■□□□□ 0.8
VDR-203ENST00000546653 USP35Q9P2H5 1018 aa20.03■□□□□ 0.8
VDR-203ENST00000546653 CHD4Q14839 1912 aa20.02■□□□□ 0.8
VDR-203ENST00000546653 MYOM1P52179 1685 aa20.01■□□□□ 0.79
VDR-203ENST00000546653 RGPD3A6NKT7 1758 aaPredicted RBP20■□□□□ 0.79
VDR-203ENST00000546653 RGPD4Q7Z3J3 1758 aa20■□□□□ 0.79
VDR-203ENST00000546653 TULP4Q9NRJ4 1543 aa20■□□□□ 0.79
VDR-203ENST00000546653 SSH2Q76I76 1423 aa20■□□□□ 0.79
VDR-203ENST00000546653 PAK3O75914 559 aaPredicted RBP19.99■□□□□ 0.79
VDR-203ENST00000546653 HIRIP3Q9BW71 556 aaPredicted RBP19.99■□□□□ 0.79
VDR-203ENST00000546653 PDGFDQ9GZP0 370 aaPredicted RBP19.99■□□□□ 0.79
VDR-203ENST00000546653 ANO8Q9HCE9 1232 aaPredicted RBP19.99■□□□□ 0.79
VDR-203ENST00000546653 POGKQ9P215 609 aa19.99■□□□□ 0.79
VDR-203ENST00000546653 SBF2Q86WG5 1849 aa19.99■□□□□ 0.79
VDR-203ENST00000546653 C1QTNF8P60827 252 aa19.98■□□□□ 0.79
VDR-203ENST00000546653 ZC3H6P61129 1189 aaKnown RBP19.98■□□□□ 0.79
VDR-203ENST00000546653 PEAK1Q9H792 1746 aa19.98■□□□□ 0.79
VDR-203ENST00000546653 PARP4Q9UKK3 1724 aaKnown RBP19.98■□□□□ 0.79
VDR-203ENST00000546653 LARP1Q6PKG0 1096 aaKnown RBP19.96■□□□□ 0.79
VDR-203ENST00000546653 NGDNQ8NEJ9 315 aaKnown RBP19.96■□□□□ 0.79
VDR-203ENST00000546653 LMO7Q8WWI1 1683 aa19.95■□□□□ 0.78
VDR-203ENST00000546653 PTGER2P43116 358 aa19.95■□□□□ 0.78
VDR-203ENST00000546653 ADGRB1O14514 1584 aa19.95■□□□□ 0.78
VDR-203ENST00000546653 TCP11L2Q8N4U5 519 aa19.94■□□□□ 0.78
VDR-203ENST00000546653 MINK1Q8N4C8 1332 aaPredicted RBP19.94■□□□□ 0.78
VDR-203ENST00000546653 EIF3AQ14152 1382 aaKnown RBP19.94■□□□□ 0.78
VDR-203ENST00000546653 EVA1CP58658 441 aa19.93■□□□□ 0.78
VDR-203ENST00000546653 WASLO00401 505 aaPredicted RBP19.92■□□□□ 0.78
VDR-203ENST00000546653 PLSCR1O15162 318 aa19.92■□□□□ 0.78
VDR-203ENST00000546653 ZBTB7AO95365 584 aa19.92■□□□□ 0.78
VDR-203ENST00000546653 ITSN1Q15811 1721 aa19.91■□□□□ 0.78
VDR-203ENST00000546653 NUTM2GQ5VZR2 741 aa19.91■□□□□ 0.78
VDR-203ENST00000546653 GOLGB1Q14789 3259 aaKnown RBP19.91■□□□□ 0.78
VDR-203ENST00000546653 ATP7BP35670 1465 aa19.91■□□□□ 0.78
VDR-203ENST00000546653 PTF1AQ7RTS3 328 aa19.9■□□□□ 0.78
VDR-203ENST00000546653 OVOS2A0A0G2JMS6 1433 aa19.89■□□□□ 0.77
VDR-203ENST00000546653 OVOS2A0A0J9YW53 1432 aa19.89■□□□□ 0.77
VDR-203ENST00000546653 OVOS2Q6IE36 1432 aa19.89■□□□□ 0.77
VDR-203ENST00000546653 PROM2Q8N271 834 aa19.89■□□□□ 0.77
VDR-203ENST00000546653 MPHOSPH9Q99550 1183 aa19.89■□□□□ 0.77
VDR-203ENST00000546653 SYT17Q9BSW7 474 aa19.89■□□□□ 0.77
VDR-203ENST00000546653 FHDC1Q9C0D6 1143 aaPredicted RBP19.89■□□□□ 0.77
VDR-203ENST00000546653 TRAK1Q9UPV9 953 aa19.89■□□□□ 0.77
VDR-203ENST00000546653 THRAP3Q9Y2W1 955 aaKnown RBP19.89■□□□□ 0.77
VDR-203ENST00000546653 ATF5Q9Y2D1 282 aaPredicted RBP19.88■□□□□ 0.77
VDR-203ENST00000546653 C11orf95C9JLR9 678 aaPredicted RBP19.87■□□□□ 0.77
VDR-203ENST00000546653 LRRC37A3O60309 1634 aa19.87■□□□□ 0.77
VDR-203ENST00000546653 CPDO75976 1380 aa19.86■□□□□ 0.77
VDR-203ENST00000546653 COL5A2P05997 1499 aaPredicted RBP19.85■□□□□ 0.77
VDR-203ENST00000546653 SGIP1Q9BQI5 828 aa19.84■□□□□ 0.77
VDR-203ENST00000546653 BCL11BQ9C0K0 894 aaPredicted RBP19.84■□□□□ 0.77
VDR-203ENST00000546653 NUDT16Q96DE0 195 aaKnown RBP19.83■□□□□ 0.77
VDR-203ENST00000546653 TOPAZ1Q8N9V7 1692 aa19.82■□□□□ 0.76
VDR-203ENST00000546653 USP19O94966 1318 aa19.81■□□□□ 0.76
VDR-203ENST00000546653 CRB1P82279 1406 aa19.81■□□□□ 0.76
VDR-203ENST00000546653 POLR3AO14802 1390 aaPredicted RBP19.81■□□□□ 0.76
VDR-203ENST00000546653 WNK3Q9BYP7 1800 aa19.8■□□□□ 0.76
VDR-203ENST00000546653 ARHGEF28Q8N1W1 1705 aaKnown RBP19.79■□□□□ 0.76
VDR-203ENST00000546653 ACEP12821 1306 aa19.78■□□□□ 0.76
VDR-203ENST00000546653 AKAP12Q02952 1782 aa19.78■□□□□ 0.76
VDR-203ENST00000546653 SLC15A2Q16348 729 aa19.78■□□□□ 0.76
VDR-203ENST00000546653 MTFR1LQ9H019 292 aa19.78■□□□□ 0.76
VDR-203ENST00000546653 DDB1Q16531 1140 aa19.77■□□□□ 0.76
VDR-203ENST00000546653 TXNRD1Q16881 649 aa19.77■□□□□ 0.76
VDR-203ENST00000546653 ABTB2Q8N961 1025 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms