RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 SPIRE2Q8WWL2 714 aa7.72□□□□□ -1.17
DDB1-219ENST00000541513 PRDM16Q9HAZ2 1276 aa7.72□□□□□ -1.17
DDB1-219ENST00000541513 SUGT1Q9Y2Z0 365 aa7.72□□□□□ -1.17
DDB1-219ENST00000541513 RAD54L2Q9Y4B4 1467 aa7.72□□□□□ -1.17
DDB1-219ENST00000541513 ABCA10Q8WWZ4 1543 aa7.72□□□□□ -1.17
DDB1-219ENST00000541513 HOXB1P14653 301 aaPredicted RBP7.71□□□□□ -1.18
DDB1-219ENST00000541513 ERCC5P28715 1186 aaPredicted RBP7.71□□□□□ -1.18
DDB1-219ENST00000541513 KANK4Q5T7N3 995 aaPredicted RBP7.71□□□□□ -1.18
DDB1-219ENST00000541513 DPY19L2Q6NUT2 758 aa7.71□□□□□ -1.18
DDB1-219ENST00000541513 PRR7Q8TB68 274 aa7.71□□□□□ -1.18
DDB1-219ENST00000541513 METTL14Q9HCE5 456 aaKnown RBP7.71□□□□□ -1.18
DDB1-219ENST00000541513 ATP9BO43861 1147 aa7.7□□□□□ -1.18
DDB1-219ENST00000541513 RAB11FIP3O75154 756 aa7.7□□□□□ -1.18
DDB1-219ENST00000541513 CCDC181Q5TID7 509 aa7.7□□□□□ -1.18
DDB1-219ENST00000541513 STK32AQ8WU08 396 aa7.7□□□□□ -1.18
DDB1-219ENST00000541513 BCL11AQ9H165 835 aa7.7□□□□□ -1.18
DDB1-219ENST00000541513 MYH16Q9H6N6 1097 aa7.7□□□□□ -1.18
DDB1-219ENST00000541513 CDHR5Q9HBB8 845 aa7.7□□□□□ -1.18
DDB1-219ENST00000541513 EIF4G3O43432 1585 aaKnown RBP7.7□□□□□ -1.18
DDB1-219ENST00000541513 ABCA5Q8WWZ7 1642 aa7.7□□□□□ -1.18
DDB1-219ENST00000541513 ZNF608Q9ULD9 1512 aaPredicted RBP7.69□□□□□ -1.18
DDB1-219ENST00000541513 TLDC2A0PJX2 215 aa7.69□□□□□ -1.18
DDB1-219ENST00000541513 COL19A1Q14993 1142 aa7.69□□□□□ -1.18
DDB1-219ENST00000541513 QPCTQ16769 361 aa7.69□□□□□ -1.18
DDB1-219ENST00000541513 PXYLP1Q8TE99 480 aa7.69□□□□□ -1.18
DDB1-219ENST00000541513 PBRM1Q86U86 1689 aa7.68□□□□□ -1.18
DDB1-219ENST00000541513 TBC1D9Q6ZT07 1266 aa7.68□□□□□ -1.18
DDB1-219ENST00000541513 EXOC8Q8IYI6 725 aa7.68□□□□□ -1.18
DDB1-219ENST00000541513 LARGE2Q8N3Y3 721 aa7.68□□□□□ -1.18
DDB1-219ENST00000541513 PIK3R5Q8WYR1 880 aa7.68□□□□□ -1.18
DDB1-219ENST00000541513 ARMC5Q96C12 935 aa7.68□□□□□ -1.18
DDB1-219ENST00000541513 CDCA7Q9BWT1 371 aaPredicted RBP7.68□□□□□ -1.18
DDB1-219ENST00000541513 TRIM34Q9BYJ4 488 aa7.68□□□□□ -1.18
DDB1-219ENST00000541513 LNPKQ9C0E8 428 aa7.68□□□□□ -1.18
DDB1-219ENST00000541513 ERBB3P21860 1342 aa7.68□□□□□ -1.18
DDB1-219ENST00000541513 SBNO2Q9Y2G9 1366 aa7.68□□□□□ -1.18
DDB1-219ENST00000541513 KIF3CO14782 793 aa7.67□□□□□ -1.18
DDB1-219ENST00000541513 SERPINB4P48594 390 aa7.67□□□□□ -1.18
DDB1-219ENST00000541513 EN1Q05925 392 aaPredicted RBP7.67□□□□□ -1.18
DDB1-219ENST00000541513 PRPF38BQ5VTL8 546 aaKnown RBP7.67□□□□□ -1.18
DDB1-219ENST00000541513 EGFLAMQ63HQ2 1017 aa7.67□□□□□ -1.18
DDB1-219ENST00000541513 CLP1Q92989 425 aaKnown RBP7.67□□□□□ -1.18
DDB1-219ENST00000541513 NOVA2Q9UNW9 492 aaKnown RBP7.67□□□□□ -1.18
DDB1-219ENST00000541513 TPD52L2O43399 206 aaKnown RBP7.66□□□□□ -1.18
DDB1-219ENST00000541513 RTL5Q5HYW3 569 aaPredicted RBP7.66□□□□□ -1.18
DDB1-219ENST00000541513 SLAIN2Q9P270 581 aa7.66□□□□□ -1.18
DDB1-219ENST00000541513 RBM27Q9P2N5 1060 aaKnown RBP7.66□□□□□ -1.18
DDB1-219ENST00000541513 BOLA1Q9Y3E2 137 aa7.66□□□□□ -1.18
DDB1-219ENST00000541513 AQRO60306 1485 aaKnown RBP eCLIP7.66□□□□□ -1.185e-12■■■□□ 18.9
DDB1-219ENST00000541513 GAPVD1Q14C86 1478 aa7.66□□□□□ -1.18
DDB1-219ENST00000541513 SCAMP3O14828 347 aaKnown RBP7.65□□□□□ -1.18
DDB1-219ENST00000541513 LZTS3O60299 673 aaPredicted RBP7.65□□□□□ -1.18
DDB1-219ENST00000541513 HDLBPQ00341 1268 aaKnown RBP7.65□□□□□ -1.18
DDB1-219ENST00000541513 TSNAXIP1Q2TAA8 658 aa7.65□□□□□ -1.18
DDB1-219ENST00000541513 SLC43A3Q8NBI5 491 aa7.65□□□□□ -1.18
DDB1-219ENST00000541513 ZNF526Q8TF50 670 aaPredicted RBP7.65□□□□□ -1.18
DDB1-219ENST00000541513 NLRP7Q8WX94 980 aa7.65□□□□□ -1.18
DDB1-219ENST00000541513 GPATCH3Q96I76 525 aa7.65□□□□□ -1.18
DDB1-219ENST00000541513 BRINP2Q9C0B6 783 aa7.65□□□□□ -1.18
DDB1-219ENST00000541513 ERICH3Q5RHP9 1530 aa7.64□□□□□ -1.19
DDB1-219ENST00000541513 GRIN2BQ13224 1484 aa7.64□□□□□ -1.19
DDB1-219ENST00000541513 TDRD9Q8NDG6 1382 aaKnown RBP7.64□□□□□ -1.19
DDB1-219ENST00000541513 RAD51AP2Q09MP3 1159 aa7.64□□□□□ -1.19
DDB1-219ENST00000541513 MRPL58Q14197 206 aaKnown RBP7.64□□□□□ -1.19
DDB1-219ENST00000541513 VARS2Q5ST30 1063 aaKnown RBP7.64□□□□□ -1.19
DDB1-219ENST00000541513 GORABQ5T7V8 394 aa7.64□□□□□ -1.19
DDB1-219ENST00000541513 SDE2Q6IQ49 451 aa7.64□□□□□ -1.19
DDB1-219ENST00000541513 TANGO6Q9C0B7 1094 aa7.64□□□□□ -1.19
DDB1-219ENST00000541513 SLC52A1Q9NWF4 448 aa7.64□□□□□ -1.19
DDB1-219ENST00000541513 BIN2Q9UBW5 565 aaPredicted RBP7.64□□□□□ -1.19
DDB1-219ENST00000541513 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.64□□□□□ -1.19
DDB1-219ENST00000541513 TBX22Q9Y458 520 aa7.64□□□□□ -1.19
DDB1-219ENST00000541513 ADGRG1Q9Y653 693 aa7.64□□□□□ -1.19
DDB1-219ENST00000541513 FAM196BA6NMK8 535 aa7.63□□□□□ -1.19
DDB1-219ENST00000541513 G3V3G9 751 aa7.63□□□□□ -1.19
DDB1-219ENST00000541513 TAGLNQ01995 201 aaKnown RBP7.63□□□□□ -1.19
DDB1-219ENST00000541513 SEMA3FQ13275 785 aa7.63□□□□□ -1.19
DDB1-219ENST00000541513 MICALL2Q8IY33 904 aa7.63□□□□□ -1.19
DDB1-219ENST00000541513 C1orf216Q8TAB5 229 aa7.63□□□□□ -1.19
DDB1-219ENST00000541513 KCNB2Q92953 911 aa7.63□□□□□ -1.19
DDB1-219ENST00000541513 TINF2Q9BSI4 451 aa7.63□□□□□ -1.19
DDB1-219ENST00000541513 HMX1Q9NP08 348 aaPredicted RBP7.63□□□□□ -1.19
DDB1-219ENST00000541513 EGFL7Q9UHF1 273 aa7.63□□□□□ -1.19
DDB1-219ENST00000541513 MAGI1Q96QZ7 1491 aaPredicted RBP7.62□□□□□ -1.19
DDB1-219ENST00000541513 KIF27Q86VH2 1401 aa7.62□□□□□ -1.19
DDB1-219ENST00000541513 MOXD2PA6NHM9 499 aa7.62□□□□□ -1.19
DDB1-219ENST00000541513 EVI5O60447 810 aa7.62□□□□□ -1.19
DDB1-219ENST00000541513 CD46P15529 392 aa7.62□□□□□ -1.19
DDB1-219ENST00000541513 MCCD1P59942 119 aaPredicted RBP7.62□□□□□ -1.19
DDB1-219ENST00000541513 FAM69CQ0P6D2 419 aa7.62□□□□□ -1.19
DDB1-219ENST00000541513 CSPP1Q1MSJ5 1256 aa7.62□□□□□ -1.19
DDB1-219ENST00000541513 NFATC2IPQ8NCF5 419 aa7.62□□□□□ -1.19
DDB1-219ENST00000541513 UPF1Q92900 1129 aaKnown RBP eCLIP7.62□□□□□ -1.19
DDB1-219ENST00000541513 ASB16Q96NS5 453 aa7.62□□□□□ -1.19
DDB1-219ENST00000541513 DNAJC2Q99543 621 aaKnown RBP7.62□□□□□ -1.19
DDB1-219ENST00000541513 EPAS1Q99814 870 aa7.62□□□□□ -1.19
DDB1-219ENST00000541513 BACH2Q9BYV9 841 aa7.62□□□□□ -1.19
DDB1-219ENST00000541513 NLRP2Q9NX02 1062 aa7.62□□□□□ -1.19
DDB1-219ENST00000541513 C2orf72A6NCS6 295 aa7.61□□□□□ -1.19
DDB1-219ENST00000541513 IGBP1P78318 339 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms