RNA–Protein interactions for RNA: ENST00000535118.1

LINC00943-202, long intergenic non-protein coding RNA 943, humanhuman

TSL 2

Gene LINC00943, Length 458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-202ENST00000535118 TREML4Q6UXN2 200 aa7.49□□□□□ -1.21
LINC00943-202ENST00000535118 PNMA1Q8ND90 353 aa7.49□□□□□ -1.21
LINC00943-202ENST00000535118 MAFBQ9Y5Q3 323 aaPredicted RBP7.49□□□□□ -1.21
LINC00943-202ENST00000535118 CARNS1A5YM72 827 aa7.48□□□□□ -1.21
LINC00943-202ENST00000535118 ATG7O95352 703 aa7.48□□□□□ -1.21
LINC00943-202ENST00000535118 NBPF3Q9H094 633 aa7.48□□□□□ -1.21
LINC00943-202ENST00000535118 MTMR7Q9Y216 660 aa7.48□□□□□ -1.21
LINC00943-202ENST00000535118 SLC27A5Q9Y2P5 690 aa7.48□□□□□ -1.21
LINC00943-202ENST00000535118 BHMG1C9JSJ3 638 aaPredicted RBP7.47□□□□□ -1.21
LINC00943-202ENST00000535118 ACTN4O43707 911 aaKnown RBP7.47□□□□□ -1.21
LINC00943-202ENST00000535118 PTPN5P54829 565 aa7.47□□□□□ -1.21
LINC00943-202ENST00000535118 EIF4G2P78344 907 aaKnown RBP eCLIP7.47□□□□□ -1.21
LINC00943-202ENST00000535118 Q3C1V9 767 aa7.47□□□□□ -1.21
LINC00943-202ENST00000535118 PUS10Q3MIT2 529 aaKnown RBP7.47□□□□□ -1.21
LINC00943-202ENST00000535118 LYPD8Q6UX82 237 aa7.47□□□□□ -1.21
LINC00943-202ENST00000535118 TBC1D9Q6ZT07 1266 aa7.47□□□□□ -1.21
LINC00943-202ENST00000535118 TMEM88BA6NKF7 163 aa7.46□□□□□ -1.22
LINC00943-202ENST00000535118 ATP9BO43861 1147 aa7.46□□□□□ -1.22
LINC00943-202ENST00000535118 NR1H3Q13133 447 aa7.46□□□□□ -1.22
LINC00943-202ENST00000535118 CDCA8Q53HL2 280 aa7.46□□□□□ -1.22
LINC00943-202ENST00000535118 ZFRQ96KR1 1074 aaKnown RBP7.46□□□□□ -1.22
LINC00943-202ENST00000535118 HRO43593 1189 aa7.45□□□□□ -1.22
LINC00943-202ENST00000535118 KRTAP4-8Q9BYQ9 185 aa7.45□□□□□ -1.22
LINC00943-202ENST00000535118 VRTNQ9H8Y1 702 aa7.45□□□□□ -1.22
LINC00943-202ENST00000535118 CUX2O14529 1486 aa7.44□□□□□ -1.22
LINC00943-202ENST00000535118 NRG2O14511 850 aaPredicted RBP7.44□□□□□ -1.22
LINC00943-202ENST00000535118 RNF19BQ6ZMZ0 732 aa7.44□□□□□ -1.22
LINC00943-202ENST00000535118 FBXO45P0C2W1 286 aa7.43□□□□□ -1.22
LINC00943-202ENST00000535118 BLOC1S3Q6QNY0 202 aa7.43□□□□□ -1.22
LINC00943-202ENST00000535118 LRCH3Q96II8 777 aa7.43□□□□□ -1.22
LINC00943-202ENST00000535118 ZBBXA8MT70 800 aa7.42□□□□□ -1.22
LINC00943-202ENST00000535118 KANK4Q5T7N3 995 aaPredicted RBP7.42□□□□□ -1.22
LINC00943-202ENST00000535118 FOXD4L5Q5VV16 416 aaPredicted RBP7.42□□□□□ -1.22
LINC00943-202ENST00000535118 FOXD4L4Q8WXT5 416 aaPredicted RBP7.42□□□□□ -1.22
LINC00943-202ENST00000535118 USB1Q9BQ65 265 aaKnown RBP7.42□□□□□ -1.22
LINC00943-202ENST00000535118 PRR14Q9BWN1 585 aa7.42□□□□□ -1.22
LINC00943-202ENST00000535118 FKBPLQ9UIM3 349 aa7.42□□□□□ -1.22
LINC00943-202ENST00000535118 IVNS1ABPQ9Y6Y0 642 aa7.42□□□□□ -1.22
LINC00943-202ENST00000535118 TK2O00142 265 aa7.41□□□□□ -1.22
LINC00943-202ENST00000535118 PIK3CDO00329 1044 aa7.41□□□□□ -1.22
LINC00943-202ENST00000535118 F12P00748 615 aaPredicted RBP7.41□□□□□ -1.22
LINC00943-202ENST00000535118 ELOAQ14241 798 aaKnown RBP7.41□□□□□ -1.22
LINC00943-202ENST00000535118 BRICD5Q6PL45 260 aa7.41□□□□□ -1.22
LINC00943-202ENST00000535118 MRPL50Q8N5N7 158 aaKnown RBP7.41□□□□□ -1.22
LINC00943-202ENST00000535118 NFATC2IPQ8NCF5 419 aa7.41□□□□□ -1.22
LINC00943-202ENST00000535118 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.41□□□□□ -1.22
LINC00943-202ENST00000535118 SALL2Q9Y467 1007 aaPredicted RBP7.41□□□□□ -1.22
LINC00943-202ENST00000535118 CECR2Q9BXF3 1484 aa7.41□□□□□ -1.22
LINC00943-202ENST00000535118 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.4□□□□□ -1.22
LINC00943-202ENST00000535118 ZC3H4Q9UPT8 1303 aaKnown RBP7.4□□□□□ -1.22
LINC00943-202ENST00000535118 THAP11Q96EK4 314 aa7.39□□□□□ -1.23
LINC00943-202ENST00000535118 MAP10Q9P2G4 905 aa7.39□□□□□ -1.23
LINC00943-202ENST00000535118 USP17L3A6NCW0 530 aa7.38□□□□□ -1.23
LINC00943-202ENST00000535118 USP17L4A6NCW7 530 aa7.38□□□□□ -1.23
LINC00943-202ENST00000535118 JUNDP17535 347 aa7.38□□□□□ -1.23
LINC00943-202ENST00000535118 PTPRNQ16849 979 aa7.38□□□□□ -1.23
LINC00943-202ENST00000535118 USP17L2Q6R6M4 530 aa7.38□□□□□ -1.23
LINC00943-202ENST00000535118 SND1Q7KZF4 910 aaKnown RBP eCLIP7.38□□□□□ -1.23
LINC00943-202ENST00000535118 USP17L1Q7RTZ2 530 aa7.38□□□□□ -1.23
LINC00943-202ENST00000535118 PLEKHM2Q8IWE5 1019 aa7.38□□□□□ -1.23
LINC00943-202ENST00000535118 ZMIZ1Q9ULJ6 1067 aa7.38□□□□□ -1.23
LINC00943-202ENST00000535118 NISCHQ9Y2I1 1504 aa7.37□□□□□ -1.23
LINC00943-202ENST00000535118 FMNL1O95466 1100 aaPredicted RBP7.37□□□□□ -1.23
LINC00943-202ENST00000535118 SKIP12755 728 aa7.37□□□□□ -1.23
LINC00943-202ENST00000535118 TMEM164Q5U3C3 297 aa7.37□□□□□ -1.23
LINC00943-202ENST00000535118 B4GALNT3Q6L9W6 998 aa7.37□□□□□ -1.23
LINC00943-202ENST00000535118 SCUBE3Q8IX30 993 aa7.37□□□□□ -1.23
LINC00943-202ENST00000535118 GNEQ9Y223 722 aaKnown RBP7.37□□□□□ -1.23
LINC00943-202ENST00000535118 USP17L5A8MUK1 530 aa7.36□□□□□ -1.23
LINC00943-202ENST00000535118 APLP1P51693 650 aa7.36□□□□□ -1.23
LINC00943-202ENST00000535118 CCDC27Q2M243 656 aa7.36□□□□□ -1.23
LINC00943-202ENST00000535118 FAM174AQ8TBP5 190 aa7.36□□□□□ -1.23
LINC00943-202ENST00000535118 STK32AQ8WU08 396 aa7.36□□□□□ -1.23
LINC00943-202ENST00000535118 ZNF428Q96B54 188 aa7.36□□□□□ -1.23
LINC00943-202ENST00000535118 NOVA2Q9UNW9 492 aaKnown RBP7.36□□□□□ -1.23
LINC00943-202ENST00000535118 NR1I2O75469 434 aa7.35□□□□□ -1.23
LINC00943-202ENST00000535118 RBM25P49756 843 aaKnown RBP7.35□□□□□ -1.23
LINC00943-202ENST00000535118 PPP4CP60510 307 aa7.35□□□□□ -1.23
LINC00943-202ENST00000535118 ANKK1Q8NFD2 765 aa7.35□□□□□ -1.23
LINC00943-202ENST00000535118 SOWAHBA6NEL2 793 aa7.34□□□□□ -1.23
LINC00943-202ENST00000535118 FAM196BA6NMK8 535 aa7.34□□□□□ -1.23
LINC00943-202ENST00000535118 CTHP32929 405 aa7.34□□□□□ -1.23
LINC00943-202ENST00000535118 INSM1Q01101 510 aaPredicted RBP7.34□□□□□ -1.23
LINC00943-202ENST00000535118 KRTAP9-2Q9BYQ4 174 aa7.34□□□□□ -1.23
LINC00943-202ENST00000535118 HPS5Q9UPZ3 1129 aa7.34□□□□□ -1.23
LINC00943-202ENST00000535118 GPSM3Q9Y4H4 160 aa7.34□□□□□ -1.23
LINC00943-202ENST00000535118 PCDHB3Q9Y5E6 796 aa7.34□□□□□ -1.23
LINC00943-202ENST00000535118 USP17L15C9J2P7 530 aa7.33□□□□□ -1.24
LINC00943-202ENST00000535118 USP17L10C9JJH3 530 aa7.33□□□□□ -1.24
LINC00943-202ENST00000535118 USP17L13C9JLJ4 530 aa7.33□□□□□ -1.24
LINC00943-202ENST00000535118 USP17L12C9JPN9 530 aa7.33□□□□□ -1.24
LINC00943-202ENST00000535118 USP17L11C9JVI0 530 aa7.33□□□□□ -1.24
LINC00943-202ENST00000535118 USP17L21D6R901 530 aa7.33□□□□□ -1.24
LINC00943-202ENST00000535118 USP17L18D6R9N7 530 aa7.33□□□□□ -1.24
LINC00943-202ENST00000535118 USP17L22D6RA61 530 aa7.33□□□□□ -1.24
LINC00943-202ENST00000535118 USP17L17D6RBQ6 530 aa7.33□□□□□ -1.24
LINC00943-202ENST00000535118 USP17L19D6RCP7 530 aa7.33□□□□□ -1.24
LINC00943-202ENST00000535118 USP17L20D6RJB6 530 aa7.33□□□□□ -1.24
LINC00943-202ENST00000535118 USP17L24Q0WX57 530 aa7.33□□□□□ -1.24
LINC00943-202ENST00000535118 MSS51Q4VC12 460 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms