RNA–Protein interactions for RNA: ENST00000535118.1

LINC00943-202, long intergenic non-protein coding RNA 943, humanhuman

TSL 2

Gene LINC00943, Length 458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-202ENST00000535118 AEBP2Q6ZN18 517 aaPredicted RBP19.57■□□□□ 0.72
LINC00943-202ENST00000535118 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.52
LINC00943-202ENST00000535118 POTEDQ86YR6 584 aa18.21■□□□□ 0.51
LINC00943-202ENST00000535118 SENP3Q9H4L4 574 aaPredicted RBP16.98■□□□□ 0.31
LINC00943-202ENST00000535118 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
LINC00943-202ENST00000535118 FOXD1Q16676 465 aa16.03■□□□□ 0.16
LINC00943-202ENST00000535118 MSH5O43196 834 aa15.68■□□□□ 0.1
LINC00943-202ENST00000535118 PIAS4Q8N2W9 510 aaPredicted RBP14.54□□□□□ -0.08
LINC00943-202ENST00000535118 CACNB1Q02641 598 aaPredicted RBP14.5□□□□□ -0.09
LINC00943-202ENST00000535118 POTEHQ6S545 545 aa13.94□□□□□ -0.18
LINC00943-202ENST00000535118 PLPPR3Q6T4P5 718 aa13.79□□□□□ -0.2
LINC00943-202ENST00000535118 PPP6R1Q9UPN7 881 aa13.67□□□□□ -0.22
LINC00943-202ENST00000535118 ADRA2BP18089 450 aa13.51□□□□□ -0.25
LINC00943-202ENST00000535118 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
LINC00943-202ENST00000535118 DMRT2Q9Y5R5 561 aa13.2□□□□□ -0.3
LINC00943-202ENST00000535118 C1QBPQ07021 282 aaKnown RBP12.94□□□□□ -0.34
LINC00943-202ENST00000535118 MAPK8IP2Q13387 824 aaPredicted RBP12.94□□□□□ -0.34
LINC00943-202ENST00000535118 DCAF8L1A6NGE4 600 aa12.71□□□□□ -0.37
LINC00943-202ENST00000535118 KCNA4P22459 653 aa12.62□□□□□ -0.39
LINC00943-202ENST00000535118 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
LINC00943-202ENST00000535118 SCAF1Q9H7N4 1312 aaKnown RBP12.41□□□□□ -0.42
LINC00943-202ENST00000535118 SP7Q8TDD2 431 aaPredicted RBP12.26□□□□□ -0.45
LINC00943-202ENST00000535118 PPP4R3CPQ6ZMV5 832 aa12.23□□□□□ -0.45
LINC00943-202ENST00000535118 PLSCR2Q9NRY7 297 aa12.19□□□□□ -0.46
LINC00943-202ENST00000535118 SLC4A1APQ9BWU0 796 aaKnown RBP12.11□□□□□ -0.47
LINC00943-202ENST00000535118 HOXD11P31277 338 aaPredicted RBP12.06□□□□□ -0.48
LINC00943-202ENST00000535118 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
LINC00943-202ENST00000535118 CSRNP3Q8WYN3 585 aa12.04□□□□□ -0.48
LINC00943-202ENST00000535118 DNAJC5BQ9UF47 199 aa12.02□□□□□ -0.49
LINC00943-202ENST00000535118 NPM3O75607 178 aaKnown RBP11.92□□□□□ -0.5
LINC00943-202ENST00000535118 DSG3P32926 999 aa11.8□□□□□ -0.52
LINC00943-202ENST00000535118 CNKSR2Q8WXI2 1034 aa11.76□□□□□ -0.53
LINC00943-202ENST00000535118 CHRDL2Q6WN34 429 aa11.73□□□□□ -0.53
LINC00943-202ENST00000535118 ZBTB22O15209 634 aa11.64□□□□□ -0.55
LINC00943-202ENST00000535118 RNF216Q9NWF9 866 aaPredicted RBP11.5□□□□□ -0.57
LINC00943-202ENST00000535118 LHX8Q68G74 356 aa11.48□□□□□ -0.57
LINC00943-202ENST00000535118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC00943-202ENST00000535118 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
LINC00943-202ENST00000535118 CAPN15O75808 1086 aa11.43□□□□□ -0.58
LINC00943-202ENST00000535118 SPINK5Q9NQ38 1064 aaPredicted RBP11.37□□□□□ -0.59
LINC00943-202ENST00000535118 HAX1O00165 279 aa11.35□□□□□ -0.59
LINC00943-202ENST00000535118 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
LINC00943-202ENST00000535118 SLC4A2P04920 1241 aa11.12□□□□□ -0.63
LINC00943-202ENST00000535118 EVX2Q03828 476 aa11.08□□□□□ -0.64
LINC00943-202ENST00000535118 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
LINC00943-202ENST00000535118 U3KPZ7 1027 aaPredicted RBP11.01□□□□□ -0.65
LINC00943-202ENST00000535118 ABCB7O75027 752 aa10.99□□□□□ -0.65
LINC00943-202ENST00000535118 ATXN8OSP0DMR3 200 aa10.99□□□□□ -0.65
LINC00943-202ENST00000535118 MYCNP04198 464 aaPredicted RBP10.98□□□□□ -0.65
LINC00943-202ENST00000535118 RTN4Q9NQC3 1192 aaKnown RBP10.91□□□□□ -0.66
LINC00943-202ENST00000535118 POTEMA6NI47 508 aa10.9□□□□□ -0.66
LINC00943-202ENST00000535118 AMER1Q5JTC6 1135 aaPredicted RBP10.9□□□□□ -0.66
LINC00943-202ENST00000535118 PCDH10Q9P2E7 1040 aa10.87□□□□□ -0.67
LINC00943-202ENST00000535118 FKBP8Q14318 412 aa10.84□□□□□ -0.67
LINC00943-202ENST00000535118 TRHP20396 242 aaPredicted RBP10.83□□□□□ -0.68
LINC00943-202ENST00000535118 POTEGQ6S5H5 508 aa10.8□□□□□ -0.68
LINC00943-202ENST00000535118 SLC24A1O60721 1099 aa10.79□□□□□ -0.68
LINC00943-202ENST00000535118 ZNF219Q9P2Y4 722 aaPredicted RBP10.77□□□□□ -0.69
LINC00943-202ENST00000535118 GABBR2O75899 941 aa10.75□□□□□ -0.69
LINC00943-202ENST00000535118 FXR2P51116 673 aaKnown RBP eCLIP10.75□□□□□ -0.69
LINC00943-202ENST00000535118 AKT1S1Q96B36 256 aa10.69□□□□□ -0.7
LINC00943-202ENST00000535118 ATF5Q9Y2D1 282 aaPredicted RBP10.67□□□□□ -0.7
LINC00943-202ENST00000535118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.6□□□□□ -0.71
LINC00943-202ENST00000535118 HNRNPUL2Q1KMD3 747 aaKnown RBP10.6□□□□□ -0.71
LINC00943-202ENST00000535118 SAMD1Q6SPF0 538 aaPredicted RBP10.59□□□□□ -0.71
LINC00943-202ENST00000535118 REM2Q8IYK8 340 aaPredicted RBP10.58□□□□□ -0.72
LINC00943-202ENST00000535118 APLP2Q06481 763 aa10.56□□□□□ -0.72
LINC00943-202ENST00000535118 POTEIP0CG38 1075 aa10.49□□□□□ -0.73
LINC00943-202ENST00000535118 C19orf67A6NJJ6 358 aa10.47□□□□□ -0.73
LINC00943-202ENST00000535118 PITPNM1O00562 1244 aa10.46□□□□□ -0.73
LINC00943-202ENST00000535118 OTUD5Q96G74 571 aa10.43□□□□□ -0.74
LINC00943-202ENST00000535118 FBXO3Q9UK99 471 aa10.28□□□□□ -0.76
LINC00943-202ENST00000535118 SPDYE4A6NLX3 237 aa10.27□□□□□ -0.77
LINC00943-202ENST00000535118 MKRN4PQ13434 485 aaPredicted RBP10.24□□□□□ -0.77
LINC00943-202ENST00000535118 PROM2Q8N271 834 aa10.21□□□□□ -0.77
LINC00943-202ENST00000535118 PRKAR2AP13861 404 aaKnown RBP10.19□□□□□ -0.78
LINC00943-202ENST00000535118 POLA2Q14181 598 aa10.17□□□□□ -0.78
LINC00943-202ENST00000535118 VASPP50552 380 aaPredicted RBP10.14□□□□□ -0.79
LINC00943-202ENST00000535118 FBLN2P98095 1184 aa10.14□□□□□ -0.79
LINC00943-202ENST00000535118 POTEB2H3BUK9 544 aa10.11□□□□□ -0.79
LINC00943-202ENST00000535118 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
LINC00943-202ENST00000535118 DCBLD2Q96PD2 775 aa10.08□□□□□ -0.8
LINC00943-202ENST00000535118 PLCB2Q00722 1185 aa10.05□□□□□ -0.8
LINC00943-202ENST00000535118 IFNLR1Q8IU57 520 aaPredicted RBP10.05□□□□□ -0.8
LINC00943-202ENST00000535118 CLCN6P51797 869 aa10.04□□□□□ -0.8
LINC00943-202ENST00000535118 CDAN1Q8IWY9 1227 aa10□□□□□ -0.81
LINC00943-202ENST00000535118 FAM163AQ96GL9 167 aaPredicted RBP9.99□□□□□ -0.81
LINC00943-202ENST00000535118 MMRN1Q13201 1228 aa9.96□□□□□ -0.82
LINC00943-202ENST00000535118 PKD2Q13563 968 aa9.95□□□□□ -0.82
LINC00943-202ENST00000535118 ZBTB12Q9Y330 459 aaPredicted RBP9.94□□□□□ -0.82
LINC00943-202ENST00000535118 DCAF8L2P0C7V8 631 aa9.93□□□□□ -0.82
LINC00943-202ENST00000535118 HAP1P54257 671 aaPredicted RBP9.9□□□□□ -0.82
LINC00943-202ENST00000535118 OSCARQ8IYS5 282 aa9.87□□□□□ -0.83
LINC00943-202ENST00000535118 SPOCK2Q92563 424 aa9.82□□□□□ -0.84
LINC00943-202ENST00000535118 SPNS2Q8IVW8 549 aa9.8□□□□□ -0.84
LINC00943-202ENST00000535118 KLHL34Q8N239 644 aa9.8□□□□□ -0.84
LINC00943-202ENST00000535118 ZNF692Q9BU19 519 aaPredicted RBP9.78□□□□□ -0.84
LINC00943-202ENST00000535118 STAG3Q9UJ98 1225 aa9.78□□□□□ -0.84
LINC00943-202ENST00000535118 VSIG10Q8N0Z9 540 aa9.77□□□□□ -0.85
LINC00943-202ENST00000535118 ECM2O94769 699 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms