RNA–Protein interactions for RNA: ENST00000533928.1

USP33-218, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 4

Gene USP33, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-218ENST00000533928 FDX1P10109 184 aa7.42□□□□□ -1.22
USP33-218ENST00000533928 SSTR3P32745 418 aaPredicted RBP7.42□□□□□ -1.22
USP33-218ENST00000533928 WNT7BP56706 349 aa7.42□□□□□ -1.22
USP33-218ENST00000533928 RETREG3Q86VR2 466 aa7.42□□□□□ -1.22
USP33-218ENST00000533928 GRIN2BQ13224 1484 aa7.42□□□□□ -1.22
USP33-218ENST00000533928 HPS1Q92902 700 aa7.41□□□□□ -1.22
USP33-218ENST00000533928 PCDHGC3Q9UN70 934 aa7.41□□□□□ -1.22
USP33-218ENST00000533928 ZNF608Q9ULD9 1512 aaPredicted RBP7.41□□□□□ -1.22
USP33-218ENST00000533928 C6orf229H3BNL8 230 aa7.4□□□□□ -1.22
USP33-218ENST00000533928 ZMYND10O75800 440 aa7.4□□□□□ -1.22
USP33-218ENST00000533928 PTCRAQ6ISU1 281 aaPredicted RBP7.4□□□□□ -1.22
USP33-218ENST00000533928 BARGINQ6ZT62 677 aa7.4□□□□□ -1.22
USP33-218ENST00000533928 ZC3H15Q8WU90 426 aaKnown RBP7.4□□□□□ -1.22
USP33-218ENST00000533928 SPIRE2Q8WWL2 714 aa7.4□□□□□ -1.22
USP33-218ENST00000533928 NUDT12Q9BQG2 462 aa7.4□□□□□ -1.22
USP33-218ENST00000533928 ERICH3Q5RHP9 1530 aa7.4□□□□□ -1.22
USP33-218ENST00000533928 PBRM1Q86U86 1689 aa7.4□□□□□ -1.23
USP33-218ENST00000533928 SUPT5HO00267 1087 aaKnown RBP7.39□□□□□ -1.23
USP33-218ENST00000533928 LCE2AQ5TA79 106 aaPredicted RBP7.39□□□□□ -1.23
USP33-218ENST00000533928 ATP13A2Q9NQ11 1180 aa7.39□□□□□ -1.23
USP33-218ENST00000533928 SYNJ1O43426 1573 aa7.38□□□□□ -1.23
USP33-218ENST00000533928 SYNJ2O15056 1496 aa7.38□□□□□ -1.23
USP33-218ENST00000533928 NDUFV2P19404 249 aa7.38□□□□□ -1.23
USP33-218ENST00000533928 TTLL12Q14166 644 aaPredicted RBP7.38□□□□□ -1.23
USP33-218ENST00000533928 CHD1O14646 1710 aa7.38□□□□□ -1.23
USP33-218ENST00000533928 GAPVD1Q14C86 1478 aa7.37□□□□□ -1.23
USP33-218ENST00000533928 ALDH1A1P00352 501 aa7.37□□□□□ -1.23
USP33-218ENST00000533928 MS4A1P11836 297 aa7.37□□□□□ -1.23
USP33-218ENST00000533928 MOXD2PA6NHM9 499 aa7.36□□□□□ -1.23
USP33-218ENST00000533928 WFS1O76024 890 aa7.36□□□□□ -1.23
USP33-218ENST00000533928 CCNYL3P0C7X3 344 aa7.36□□□□□ -1.23
USP33-218ENST00000533928 SNRPBP14678 240 aaKnown RBP7.36□□□□□ -1.23
USP33-218ENST00000533928 EHBP1Q8NDI1 1231 aa7.36□□□□□ -1.23
USP33-218ENST00000533928 SENP2Q9HC62 589 aa7.36□□□□□ -1.23
USP33-218ENST00000533928 ADAMTS12P58397 1594 aa7.35□□□□□ -1.23
USP33-218ENST00000533928 SIAH2O43255 324 aa7.35□□□□□ -1.23
USP33-218ENST00000533928 AMHR2Q16671 573 aa7.35□□□□□ -1.23
USP33-218ENST00000533928 GIGYF2Q6Y7W6 1299 aaKnown RBP7.35□□□□□ -1.23
USP33-218ENST00000533928 CLASP1Q7Z460 1538 aa7.35□□□□□ -1.23
USP33-218ENST00000533928 SNAPC4Q5SXM2 1469 aa7.35□□□□□ -1.23
USP33-218ENST00000533928 RAD54L2Q9Y4B4 1467 aa7.35□□□□□ -1.23
USP33-218ENST00000533928 CUL7Q14999 1698 aa7.35□□□□□ -1.23
USP33-218ENST00000533928 PTPRNQ16849 979 aa7.34□□□□□ -1.23
USP33-218ENST00000533928 PRR7Q8TB68 274 aa7.34□□□□□ -1.23
USP33-218ENST00000533928 TRIM47Q96LD4 638 aa7.34□□□□□ -1.23
USP33-218ENST00000533928 EVA1BQ9NVM1 165 aa7.34□□□□□ -1.23
USP33-218ENST00000533928 AQRO60306 1485 aaKnown RBP eCLIP7.34□□□□□ -1.23
USP33-218ENST00000533928 SH3BP2P78314 561 aa7.33□□□□□ -1.24
USP33-218ENST00000533928 NFX1Q12986 1120 aaKnown RBP7.33□□□□□ -1.24
USP33-218ENST00000533928 BEGAINQ9BUH8 593 aa7.33□□□□□ -1.24
USP33-218ENST00000533928 FHAD1B1AJZ9 1412 aa7.33□□□□□ -1.24
USP33-218ENST00000533928 SPDYE5A6NIY4 337 aa7.32□□□□□ -1.24
USP33-218ENST00000533928 KCNH2Q12809 1159 aa7.32□□□□□ -1.24
USP33-218ENST00000533928 MTMR2Q13614 643 aa7.32□□□□□ -1.24
USP33-218ENST00000533928 BAP1Q92560 729 aa7.32□□□□□ -1.24
USP33-218ENST00000533928 KIFC2Q96AC6 838 aa7.32□□□□□ -1.24
USP33-218ENST00000533928 UNC93B1Q9H1C4 597 aa7.32□□□□□ -1.24
USP33-218ENST00000533928 WASF2Q9Y6W5 498 aa7.32□□□□□ -1.24
USP33-218ENST00000533928 NUP160Q12769 1436 aa7.31□□□□□ -1.24
USP33-218ENST00000533928 ARHGEF11O15085 1522 aa7.31□□□□□ -1.24
USP33-218ENST00000533928 TDRD9Q8NDG6 1382 aaKnown RBP7.31□□□□□ -1.24
USP33-218ENST00000533928 GRIN2AQ12879 1464 aa7.3□□□□□ -1.24
USP33-218ENST00000533928 KIF27Q86VH2 1401 aa7.3□□□□□ -1.24
USP33-218ENST00000533928 TERTO14746 1132 aaKnown RBP7.3□□□□□ -1.24
USP33-218ENST00000533928 LINC01559Q495D7 138 aa7.3□□□□□ -1.24
USP33-218ENST00000533928 DESI1Q6ICB0 168 aa7.3□□□□□ -1.24
USP33-218ENST00000533928 TBC1D2Q9BYX2 928 aa7.3□□□□□ -1.24
USP33-218ENST00000533928 RIMBP3CA6NJZ7 1639 aa7.3□□□□□ -1.24
USP33-218ENST00000533928 RIMBP3BA6NNM3 1639 aa7.3□□□□□ -1.24
USP33-218ENST00000533928 RIMBP3Q9UFD9 1639 aa7.3□□□□□ -1.24
USP33-218ENST00000533928 CAPN5O15484 640 aaPredicted RBP7.29□□□□□ -1.24
USP33-218ENST00000533928 GJA5P36382 358 aa7.29□□□□□ -1.24
USP33-218ENST00000533928 DIXDC1Q155Q3 683 aa7.29□□□□□ -1.24
USP33-218ENST00000533928 PCDHB15Q9Y5E8 787 aa7.29□□□□□ -1.24
USP33-218ENST00000533928 SHROOM2Q13796 1616 aa7.29□□□□□ -1.24
USP33-218ENST00000533928 TRIM66O15016 1216 aa7.28□□□□□ -1.24
USP33-218ENST00000533928 RSBN1LQ6PCB5 846 aaPredicted RBP7.28□□□□□ -1.24
USP33-218ENST00000533928 PARP9Q8IXQ6 854 aa7.28□□□□□ -1.24
USP33-218ENST00000533928 VARSP26640 1264 aaKnown RBP7.27□□□□□ -1.25
USP33-218ENST00000533928 CTHP32929 405 aa7.27□□□□□ -1.25
USP33-218ENST00000533928 LYPD8Q6UX82 237 aa7.27□□□□□ -1.25
USP33-218ENST00000533928 TRIM46Q7Z4K8 759 aa7.27□□□□□ -1.25
USP33-218ENST00000533928 ZNF511Q8NB15 262 aa7.27□□□□□ -1.25
USP33-218ENST00000533928 CHMP7Q8WUX9 453 aaPredicted RBP7.27□□□□□ -1.25
USP33-218ENST00000533928 AK7Q96M32 723 aa7.27□□□□□ -1.25
USP33-218ENST00000533928 SPTLC1O15269 473 aa7.26□□□□□ -1.25
USP33-218ENST00000533928 WIPF1O43516 503 aa7.26□□□□□ -1.25
USP33-218ENST00000533928 BMP1P13497 986 aa7.26□□□□□ -1.25
USP33-218ENST00000533928 TLL2Q9Y6L7 1015 aa7.26□□□□□ -1.25
USP33-218ENST00000533928 PLEKHG3A1L390 1219 aa7.25□□□□□ -1.25
USP33-218ENST00000533928 CFAP99D6REC4 459 aa7.25□□□□□ -1.25
USP33-218ENST00000533928 HRCP23327 699 aa7.25□□□□□ -1.25
USP33-218ENST00000533928 LCE2CQ5TA81 110 aa7.25□□□□□ -1.25
USP33-218ENST00000533928 RIC3Q7Z5B4 369 aa7.25□□□□□ -1.25
USP33-218ENST00000533928 RUSC2Q8N2Y8 1516 aa7.25□□□□□ -1.25
USP33-218ENST00000533928 MPNDQ8N594 471 aa7.24□□□□□ -1.25
USP33-218ENST00000533928 ZBTB3Q9H5J0 574 aa7.24□□□□□ -1.25
USP33-218ENST00000533928 EEA1Q15075 1411 aa7.24□□□□□ -1.25
USP33-218ENST00000533928 CEP170Q5SW79 1584 aa7.24□□□□□ -1.25
USP33-218ENST00000533928 INSM1Q01101 510 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms