RNA–Protein interactions for RNA: ENST00000530262.5

MACF1-229, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 6,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-229ENST00000530262 NINLQ9Y2I6 1382 aa8.83□□□□□ -1
MACF1-229ENST00000530262 CPLX1O14810 134 aa8.83□□□□□ -1
MACF1-229ENST00000530262 TRDNQ13061 729 aa8.83□□□□□ -1
MACF1-229ENST00000530262 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.83□□□□□ -1
MACF1-229ENST00000530262 TRAPPC8Q9Y2L5 1435 aa8.83□□□□□ -1
MACF1-229ENST00000530262 EIF2S2P20042 333 aaKnown RBP8.83□□□□□ -1
MACF1-229ENST00000530262 SLC12A5Q9H2X9 1139 aa8.83□□□□□ -1
MACF1-229ENST00000530262 IPO7O95373 1038 aaKnown RBP8.83□□□□□ -1
MACF1-229ENST00000530262 NECTIN2Q92692 538 aa8.83□□□□□ -1
MACF1-229ENST00000530262 SMC3Q9UQE7 1217 aa8.83□□□□□ -1
MACF1-229ENST00000530262 HSPA2P54652 639 aa8.82□□□□□ -1
MACF1-229ENST00000530262 NCOA1Q15788 1441 aa8.82□□□□□ -1
MACF1-229ENST00000530262 CDC45O75419 566 aa8.82□□□□□ -1
MACF1-229ENST00000530262 FKBP5Q13451 457 aaPredicted RBP8.82□□□□□ -1
MACF1-229ENST00000530262 BICD2Q8TD16 824 aa8.82□□□□□ -1
MACF1-229ENST00000530262 C22orf23Q9BZE7 217 aa8.82□□□□□ -1
MACF1-229ENST00000530262 DHX29Q7Z478 1369 aaKnown RBP8.82□□□□□ -1
MACF1-229ENST00000530262 ERICH2A1L162 156 aa8.82□□□□□ -1
MACF1-229ENST00000530262 SASS6Q6UVJ0 657 aa8.82□□□□□ -1
MACF1-229ENST00000530262 TRIM34Q9BYJ4 488 aa8.81□□□□□ -1
MACF1-229ENST00000530262 TSPYL4Q9UJ04 414 aa8.81□□□□□ -1
MACF1-229ENST00000530262 WWC1Q8IX03 1113 aa8.81□□□□□ -1
MACF1-229ENST00000530262 TEX35Q5T0J7 233 aa8.81□□□□□ -1
MACF1-229ENST00000530262 CCAR2Q8N163 923 aaKnown RBP8.81□□□□□ -1
MACF1-229ENST00000530262 RTEL1-TNFRSF6BF6WH68 1400 aa8.81□□□□□ -1
MACF1-229ENST00000530262 LETM1O95202 739 aaPredicted RBP8.81□□□□□ -1
MACF1-229ENST00000530262 CHD1O14646 1710 aa8.8□□□□□ -1
MACF1-229ENST00000530262 FOXD4L6Q3SYB3 417 aaPredicted RBP8.8□□□□□ -1
MACF1-229ENST00000530262 FOXD4L3Q6VB84 417 aaPredicted RBP8.8□□□□□ -1
MACF1-229ENST00000530262 RAPGEF4Q8WZA2 1011 aa8.8□□□□□ -1
MACF1-229ENST00000530262 PCMTD1Q96MG8 357 aaPredicted RBP8.8□□□□□ -1
MACF1-229ENST00000530262 ADGRF5Q8IZF2 1346 aa8.8□□□□□ -1
MACF1-229ENST00000530262 APPP05067 770 aa8.8□□□□□ -1
MACF1-229ENST00000530262 PSMA5P28066 241 aa8.8□□□□□ -1
MACF1-229ENST00000530262 TCEAL9Q9UHQ7 104 aa8.8□□□□□ -1
MACF1-229ENST00000530262 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.8□□□□□ -1
MACF1-229ENST00000530262 KDM5BQ9UGL1 1544 aa8.8□□□□□ -1
MACF1-229ENST00000530262 NFXL1Q6ZNB6 911 aa8.8□□□□□ -1
MACF1-229ENST00000530262 CCDC73Q6ZRK6 1079 aa8.8□□□□□ -1
MACF1-229ENST00000530262 AMOTL2Q9Y2J4 779 aa8.8□□□□□ -1
MACF1-229ENST00000530262 ZNF518AQ6AHZ1 1483 aa8.8□□□□□ -1
MACF1-229ENST00000530262 SAFBQ15424 915 aaKnown RBP eCLIP8.79□□□□□ -1
MACF1-229ENST00000530262 WASHC2AQ641Q2 1341 aa8.79□□□□□ -1
MACF1-229ENST00000530262 ZNF592Q92610 1267 aa8.79□□□□□ -1
MACF1-229ENST00000530262 CCDC39Q9UFE4 941 aa8.79□□□□□ -1
MACF1-229ENST00000530262 RPGRIP1LQ68CZ1 1315 aa8.79□□□□□ -1
MACF1-229ENST00000530262 NAT10Q9H0A0 1025 aaKnown RBP8.79□□□□□ -1
MACF1-229ENST00000530262 PPP6R1Q9UPN7 881 aa8.79□□□□□ -1
MACF1-229ENST00000530262 PDE4CQ08493 712 aa8.79□□□□□ -1
MACF1-229ENST00000530262 PRM3Q9NNZ6 103 aa8.79□□□□□ -1
MACF1-229ENST00000530262 TNRQ92752 1358 aa8.79□□□□□ -1
MACF1-229ENST00000530262 A2MP01023 1474 aa8.79□□□□□ -1
MACF1-229ENST00000530262 MAP3K1Q13233 1512 aa8.78□□□□□ -1
MACF1-229ENST00000530262 VPS37CA5D8V6 355 aaPredicted RBP8.78□□□□□ -1
MACF1-229ENST00000530262 VPS37DQ86XT2 251 aa8.78□□□□□ -1
MACF1-229ENST00000530262 CNTROBQ8N137 903 aa8.78□□□□□ -1
MACF1-229ENST00000530262 ANKRD30BQ9BXX2 1392 aa8.78□□□□□ -1
MACF1-229ENST00000530262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.78□□□□□ -1
MACF1-229ENST00000530262 HOMER1Q86YM7 354 aa8.78□□□□□ -1
MACF1-229ENST00000530262 CTDP1Q9Y5B0 961 aaPredicted RBP8.78□□□□□ -1
MACF1-229ENST00000530262 ITSN2Q9NZM3 1697 aa8.78□□□□□ -1
MACF1-229ENST00000530262 KLHL34Q8N239 644 aa8.78□□□□□ -1
MACF1-229ENST00000530262 ACBD3Q9H3P7 528 aa8.78□□□□□ -1
MACF1-229ENST00000530262 ARGLU1Q9NWB6 273 aaPredicted RBP8.78□□□□□ -1
MACF1-229ENST00000530262 MRE11P49959 708 aa8.78□□□□□ -1
MACF1-229ENST00000530262 ZC3H6P61129 1189 aaKnown RBP8.78□□□□□ -1
MACF1-229ENST00000530262 UBTFL1P0CB47 393 aaPredicted RBP8.78□□□□□ -1
MACF1-229ENST00000530262 MCM2P49736 904 aa8.78□□□□□ -1
MACF1-229ENST00000530262 ZNF771Q7L3S4 317 aaPredicted RBP8.78□□□□□ -1
MACF1-229ENST00000530262 LNPKQ9C0E8 428 aa8.77□□□□□ -1
MACF1-229ENST00000530262 HIP1O00291 1037 aa8.77□□□□□ -1.01
MACF1-229ENST00000530262 MTHFSP49914 203 aa8.77□□□□□ -1.01
MACF1-229ENST00000530262 BRMS1Q9HCU9 246 aa8.77□□□□□ -1.01
MACF1-229ENST00000530262 FAM135AQ9P2D6 1515 aa8.77□□□□□ -1.01
MACF1-229ENST00000530262 NOS1P29475 1434 aa8.77□□□□□ -1.01
MACF1-229ENST00000530262 FAM43AQ8N2R8 423 aa8.77□□□□□ -1.01
MACF1-229ENST00000530262 GNAI3P08754 354 aa8.77□□□□□ -1.01
MACF1-229ENST00000530262 RALYLQ86SE5 291 aaKnown RBP8.77□□□□□ -1.01
MACF1-229ENST00000530262 OLFM4Q6UX06 510 aa8.76□□□□□ -1.01
MACF1-229ENST00000530262 RIC3Q7Z5B4 369 aa8.76□□□□□ -1.01
MACF1-229ENST00000530262 NUDT16Q96DE0 195 aaKnown RBP8.76□□□□□ -1.01
MACF1-229ENST00000530262 RRS1Q15050 365 aaKnown RBP8.76□□□□□ -1.01
MACF1-229ENST00000530262 CCDC30Q5VVM6 783 aa8.76□□□□□ -1.01
MACF1-229ENST00000530262 ADAMTS2O95450 1211 aa8.76□□□□□ -1.01
MACF1-229ENST00000530262 XBP1P17861 261 aa8.76□□□□□ -1.01
MACF1-229ENST00000530262 CDR1P51861 262 aa8.76□□□□□ -1.01
MACF1-229ENST00000530262 TOM1L2Q6ZVM7 507 aa8.76□□□□□ -1.01
MACF1-229ENST00000530262 PANK1Q8TE04 598 aa8.76□□□□□ -1.01
MACF1-229ENST00000530262 GCC1Q96CN9 775 aa8.76□□□□□ -1.01
MACF1-229ENST00000530262 AK7Q96M32 723 aa8.76□□□□□ -1.01
MACF1-229ENST00000530262 PTPRKQ15262 1439 aa8.76□□□□□ -1.01
MACF1-229ENST00000530262 FOXO3O43524 673 aa8.76□□□□□ -1.01
MACF1-229ENST00000530262 GAS2L2Q8NHY3 880 aa8.76□□□□□ -1.01
MACF1-229ENST00000530262 PRDM11Q9NQV5 511 aa8.76□□□□□ -1.01
MACF1-229ENST00000530262 MBD3O95983 291 aa8.75□□□□□ -1.01
MACF1-229ENST00000530262 NFKBIBQ15653 356 aa8.75□□□□□ -1.01
MACF1-229ENST00000530262 MTERF4Q7Z6M4 381 aaKnown RBP8.75□□□□□ -1.01
MACF1-229ENST00000530262 CT47B1P0C2W7 299 aaPredicted RBP8.75□□□□□ -1.01
MACF1-229ENST00000530262 PDE3AQ14432 1141 aa8.75□□□□□ -1.01
MACF1-229ENST00000530262 ERC1Q8IUD2 1116 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms